Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gm25684-201ENSMUST00000083941 107 ntBASIC0.92□□□□□ -2.26
Rnf220Q6PDX6 Gm24586-201ENSMUST00000116695 89 ntBASIC0.91□□□□□ -2.26
Rnf220Q6PDX6 Gm14884-201ENSMUST00000120456 196 ntBASIC0.91□□□□□ -2.26
Rnf220Q6PDX6 Gm25976-201ENSMUST00000158695 130 ntBASIC0.91□□□□□ -2.26
Rnf220Q6PDX6 Mir6364-201ENSMUST00000183396 86 ntBASIC0.91□□□□□ -2.26
Rnf220Q6PDX6 Mir6240-201ENSMUST00000184281 117 ntBASIC0.91□□□□□ -2.26
Rnf220Q6PDX6 Mir7059-201ENSMUST00000184825 59 ntBASIC0.91□□□□□ -2.26
Rnf220Q6PDX6 Gm42844-201ENSMUST00000200355 112 ntBASIC0.91□□□□□ -2.26
Rnf220Q6PDX6 mt-Tf-201ENSMUST00000082387 68 ntBASIC0.91□□□□□ -2.26
Rnf220Q6PDX6 Mir362-201ENSMUST00000093592 65 ntBASIC0.91□□□□□ -2.26
Rnf220Q6PDX6 Mir1a-1-201ENSMUST00000093635 77 ntBASIC0.91□□□□□ -2.26
Rnf220Q6PDX6 Gm23329-201ENSMUST00000157415 108 ntBASIC0.9□□□□□ -2.27
Rnf220Q6PDX6 Gm25974-201ENSMUST00000158701 94 ntBASIC0.9□□□□□ -2.27
Rnf220Q6PDX6 Gm22503-201ENSMUST00000158983 115 ntBASIC0.9□□□□□ -2.27
Rnf220Q6PDX6 Gm24154-201ENSMUST00000175261 130 ntBASIC0.9□□□□□ -2.27
Rnf220Q6PDX6 Gm22070-201ENSMUST00000178475 107 ntBASIC0.9□□□□□ -2.27
Rnf220Q6PDX6 Mir7010-201ENSMUST00000183464 63 ntBASIC0.9□□□□□ -2.27
Rnf220Q6PDX6 Gm28435-201ENSMUST00000185496 108 ntBASIC0.9□□□□□ -2.27
Rnf220Q6PDX6 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
Rnf220Q6PDX6 Gm38274-201ENSMUST00000195689 148 ntBASIC0.9□□□□□ -2.27
Rnf220Q6PDX6 AC160550.1-201ENSMUST00000228659 181 ntBASIC0.9□□□□□ -2.27
Rnf220Q6PDX6 Gm25899-201ENSMUST00000082672 141 ntBASIC0.9□□□□□ -2.27
Rnf220Q6PDX6 Mir219a-2-201ENSMUST00000083551 97 ntBASIC0.9□□□□□ -2.27
Rnf220Q6PDX6 Snord80-201ENSMUST00000083801 81 ntBASIC0.9□□□□□ -2.27
Rnf220Q6PDX6 Gm23482-201ENSMUST00000104172 122 ntBASIC0.89□□□□□ -2.27
Rnf220Q6PDX6 Gm6985-201ENSMUST00000121255 271 ntBASIC0.89□□□□□ -2.27
Rnf220Q6PDX6 Gm23661-201ENSMUST00000122630 87 ntBASIC0.89□□□□□ -2.27
Rnf220Q6PDX6 Mir3968-201ENSMUST00000175355 100 ntBASIC0.89□□□□□ -2.27
Rnf220Q6PDX6 Gm27297-201ENSMUST00000183395 105 ntBASIC0.89□□□□□ -2.27
Rnf220Q6PDX6 Gm24148-201ENSMUST00000082762 80 ntBASIC0.89□□□□□ -2.27
Rnf220Q6PDX6 Gm26062-201ENSMUST00000083379 107 ntBASIC0.89□□□□□ -2.27
Rnf220Q6PDX6 Snord33-201ENSMUST00000083694 84 ntBASIC0.89□□□□□ -2.27
Rnf220Q6PDX6 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
Rnf220Q6PDX6 Gm22689-201ENSMUST00000102452 110 ntBASIC0.88□□□□□ -2.27
Rnf220Q6PDX6 Mir6342-201ENSMUST00000183870 125 ntBASIC0.88□□□□□ -2.27
Rnf220Q6PDX6 Gm25378-201ENSMUST00000104333 129 ntBASIC0.87□□□□□ -2.27
Rnf220Q6PDX6 Gm23328-201ENSMUST00000157418 132 ntBASIC0.87□□□□□ -2.27
Rnf220Q6PDX6 Gm23636-201ENSMUST00000175070 95 ntBASIC0.87□□□□□ -2.27
Rnf220Q6PDX6 Gm25618-201ENSMUST00000179484 107 ntBASIC0.87□□□□□ -2.27
Rnf220Q6PDX6 Gm44301-201ENSMUST00000200362 143 ntBASIC0.87□□□□□ -2.27
Rnf220Q6PDX6 Gm43977-201ENSMUST00000203970 189 ntBASIC0.87□□□□□ -2.27
Rnf220Q6PDX6 Gm24624-201ENSMUST00000082617 164 ntBASIC0.87□□□□□ -2.27
Rnf220Q6PDX6 Gm23203-201ENSMUST00000104374 107 ntBASIC0.86□□□□□ -2.27
Rnf220Q6PDX6 Gm22490-201ENSMUST00000157188 119 ntBASIC0.86□□□□□ -2.27
Rnf220Q6PDX6 Gm23900-201ENSMUST00000157569 108 ntBASIC0.86□□□□□ -2.27
Rnf220Q6PDX6 Gm25370-201ENSMUST00000158159 94 ntBASIC0.86□□□□□ -2.27
Rnf220Q6PDX6 Gm20386-201ENSMUST00000174010 132 ntBASIC0.86□□□□□ -2.27
Rnf220Q6PDX6 Mir7052-201ENSMUST00000184821 65 ntBASIC0.86□□□□□ -2.27
Rnf220Q6PDX6 Gm22003-201ENSMUST00000101885 107 ntBASIC0.85□□□□□ -2.27
Rnf220Q6PDX6 Gm26133-201ENSMUST00000157363 100 ntBASIC0.85□□□□□ -2.27
Rnf220Q6PDX6 Gm24009-201ENSMUST00000157734 93 ntBASIC0.85□□□□□ -2.27
Rnf220Q6PDX6 Gm23065-201ENSMUST00000158236 130 ntBASIC0.85□□□□□ -2.27
Rnf220Q6PDX6 Gm25768-201ENSMUST00000158570 98 ntBASIC0.85□□□□□ -2.27
Rnf220Q6PDX6 Gm25300-201ENSMUST00000175284 84 ntBASIC0.85□□□□□ -2.27
Rnf220Q6PDX6 Gm22756-201ENSMUST00000180118 107 ntBASIC0.85□□□□□ -2.27
Rnf220Q6PDX6 Gm29535-201ENSMUST00000185723 109 ntBASIC0.85□□□□□ -2.27
Rnf220Q6PDX6 Gm28143-201ENSMUST00000191082 109 ntBASIC0.85□□□□□ -2.27
Rnf220Q6PDX6 Gm26054-201ENSMUST00000083037 107 ntBASIC0.85□□□□□ -2.27
Rnf220Q6PDX6 Gm24492-201ENSMUST00000083798 107 ntBASIC0.85□□□□□ -2.27
Rnf220Q6PDX6 Gm23344-201ENSMUST00000083818 68 ntBASIC0.85□□□□□ -2.27
Rnf220Q6PDX6 Gm23766-201ENSMUST00000103894 80 ntBASIC0.84□□□□□ -2.27
Rnf220Q6PDX6 Gm25889-201ENSMUST00000157775 107 ntBASIC0.84□□□□□ -2.27
Rnf220Q6PDX6 Gm25014-201ENSMUST00000158401 103 ntBASIC0.84□□□□□ -2.27
Rnf220Q6PDX6 Mir8116-201ENSMUST00000184134 97 ntBASIC0.84□□□□□ -2.27
Rnf220Q6PDX6 Gm27894-201ENSMUST00000184177 92 ntBASIC0.84□□□□□ -2.27
Rnf220Q6PDX6 Mir376b-201ENSMUST00000195930 82 ntBASIC0.84□□□□□ -2.27
Rnf220Q6PDX6 Mir1949-202ENSMUST00000199259 70 ntBASIC0.84□□□□□ -2.27
Rnf220Q6PDX6 Gm45197-201ENSMUST00000205288 151 ntBASIC0.84□□□□□ -2.27
Rnf220Q6PDX6 Gm12432-201ENSMUST00000119540 186 ntBASIC0.83□□□□□ -2.28
Rnf220Q6PDX6 Gm38113-201ENSMUST00000193704 201 ntBASIC0.83□□□□□ -2.28
Rnf220Q6PDX6 Gm25056-201ENSMUST00000157372 62 ntBASIC0.82□□□□□ -2.28
Rnf220Q6PDX6 Gm22520-201ENSMUST00000158269 129 ntBASIC0.82□□□□□ -2.28
Rnf220Q6PDX6 Gm26421-201ENSMUST00000104279 132 ntBASIC0.81□□□□□ -2.28
Rnf220Q6PDX6 Gm27289-201ENSMUST00000183341 82 ntBASIC0.81□□□□□ -2.28
Rnf220Q6PDX6 Gm25040-201ENSMUST00000103877 66 ntBASIC0.8□□□□□ -2.28
Rnf220Q6PDX6 Gm13065-201ENSMUST00000119178 141 ntBASIC0.8□□□□□ -2.28
Rnf220Q6PDX6 Gm24399-201ENSMUST00000157869 74 ntBASIC0.8□□□□□ -2.28
Rnf220Q6PDX6 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.8□□□□□ -2.28
Rnf220Q6PDX6 Snora75-201ENSMUST00000082903 133 ntBASIC0.8□□□□□ -2.28
Rnf220Q6PDX6 Gm45265-201ENSMUST00000210852 2497 ntBASIC0.79□□□□□ -2.28
Rnf220Q6PDX6 Gm22149-201ENSMUST00000104442 136 ntBASIC0.79□□□□□ -2.28
Rnf220Q6PDX6 Gm23991-201ENSMUST00000117033 93 ntBASIC0.79□□□□□ -2.28
Rnf220Q6PDX6 Gm24379-201ENSMUST00000122695 86 ntBASIC0.79□□□□□ -2.28
Rnf220Q6PDX6 Gm27656-201ENSMUST00000185055 80 ntBASIC0.79□□□□□ -2.28
Rnf220Q6PDX6 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.79□□□□□ -2.28
Rnf220Q6PDX6 Mir448-201ENSMUST00000083516 112 ntBASIC0.79□□□□□ -2.28
Rnf220Q6PDX6 Mir216b-201ENSMUST00000102363 86 ntBASIC0.78□□□□□ -2.28
Rnf220Q6PDX6 Snord71-201ENSMUST00000104361 85 ntBASIC0.78□□□□□ -2.28
Rnf220Q6PDX6 Gm22212-201ENSMUST00000158096 106 ntBASIC0.78□□□□□ -2.28
Rnf220Q6PDX6 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.78□□□□□ -2.28
Rnf220Q6PDX6 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.77□□□□□ -2.29
Rnf220Q6PDX6 Gm26301-201ENSMUST00000104813 95 ntBASIC0.77□□□□□ -2.29
Rnf220Q6PDX6 Gm22788-201ENSMUST00000157876 61 ntBASIC0.77□□□□□ -2.29
Rnf220Q6PDX6 Gm22469-201ENSMUST00000104118 133 ntBASIC0.76□□□□□ -2.29
Rnf220Q6PDX6 Gm22673-201ENSMUST00000104415 131 ntBASIC0.76□□□□□ -2.29
Rnf220Q6PDX6 Gm24208-201ENSMUST00000082783 135 ntBASIC0.76□□□□□ -2.29
Rnf220Q6PDX6 Gm26456-201ENSMUST00000082831 111 ntBASIC0.76□□□□□ -2.29
Rnf220Q6PDX6 Mir200a-201ENSMUST00000083466 90 ntBASIC0.76□□□□□ -2.29
Rnf220Q6PDX6 Mir196b-201ENSMUST00000083509 85 ntBASIC0.76□□□□□ -2.29
Rnf220Q6PDX6 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC0.75□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 136.9 ms