Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Gm37832-201ENSMUST00000118935 189 ntBASIC-2,17□□□□□ -2,76
Trav3-1Q5R1I8 Gm14758-201ENSMUST00000119104 138 ntBASIC-2,17□□□□□ -2,76
Trav3-1Q5R1I8 Gm23793-201ENSMUST00000179396 117 ntBASIC-2,17□□□□□ -2,76
Trav3-1Q5R1I8 Gm24202-201ENSMUST00000082948 103 ntBASIC-2,17□□□□□ -2,76
Trav3-1Q5R1I8 Gm23412-201ENSMUST00000083017 107 ntBASIC-2,17□□□□□ -2,76
Trav3-1Q5R1I8 Mir186-201ENSMUST00000083497 71 ntBASIC-2,17□□□□□ -2,76
Trav3-1Q5R1I8 Gm24913-201ENSMUST00000157286 107 ntBASIC-2,18□□□□□ -2,76
Trav3-1Q5R1I8 Gm24392-201ENSMUST00000158136 103 ntBASIC-2,18□□□□□ -2,76
Trav3-1Q5R1I8 Gm22539-201ENSMUST00000158167 117 ntBASIC-2,18□□□□□ -2,76
Trav3-1Q5R1I8 Gm22946-201ENSMUST00000158558 82 ntBASIC-2,18□□□□□ -2,76
Trav3-1Q5R1I8 Gm24667-201ENSMUST00000158938 103 ntBASIC-2,18□□□□□ -2,76
Trav3-1Q5R1I8 Gm17919-201ENSMUST00000173344 312 ntBASIC-2,18□□□□□ -2,76
Trav3-1Q5R1I8 Mir3094-201ENSMUST00000175121 64 ntBASIC-2,18□□□□□ -2,76
Trav3-1Q5R1I8 AC165157.3-201ENSMUST00000220815 103 ntBASIC-2,18□□□□□ -2,76
Trav3-1Q5R1I8 AC132833.2-201ENSMUST00000228699 157 ntBASIC-2,18□□□□□ -2,76
Trav3-1Q5R1I8 n-R5s87-201ENSMUST00000122752 116 ntBASIC-2,2□□□□□ -2,76
Trav3-1Q5R1I8 Gm25014-201ENSMUST00000158401 103 ntBASIC-2,2□□□□□ -2,76
Trav3-1Q5R1I8 Gm43624-201ENSMUST00000197368 180 ntBASIC-2,2□□□□□ -2,76
Trav3-1Q5R1I8 AC154213.2-201ENSMUST00000227138 187 ntBASIC-2,2□□□□□ -2,76
Trav3-1Q5R1I8 Gm25827-201ENSMUST00000157089 107 ntBASIC-2,21□□□□□ -2,76
Trav3-1Q5R1I8 Gm22212-201ENSMUST00000158096 106 ntBASIC-2,21□□□□□ -2,76
Trav3-1Q5R1I8 Gm23261-201ENSMUST00000158316 136 ntBASIC-2,21□□□□□ -2,76
Trav3-1Q5R1I8 Gm23859-201ENSMUST00000158383 64 ntBASIC-2,21□□□□□ -2,76
Trav3-1Q5R1I8 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC-2,21□□□□□ -2,76
Trav3-1Q5R1I8 AL603630.1-201ENSMUST00000214781 147 ntBASIC-2,21□□□□□ -2,76
Trav3-1Q5R1I8 Gm25982-201ENSMUST00000157920 101 ntBASIC-2,22□□□□□ -2,76
Trav3-1Q5R1I8 Gm24701-201ENSMUST00000101946 105 ntBASIC-2,23□□□□□ -2,77
Trav3-1Q5R1I8 Gm23987-201ENSMUST00000117039 129 ntBASIC-2,23□□□□□ -2,77
Trav3-1Q5R1I8 Gm22850-201ENSMUST00000157714 82 ntBASIC-2,23□□□□□ -2,77
Trav3-1Q5R1I8 Gm25653-201ENSMUST00000158473 138 ntBASIC-2,23□□□□□ -2,77
Trav3-1Q5R1I8 Gm22429-201ENSMUST00000158553 130 ntBASIC-2,23□□□□□ -2,77
Trav3-1Q5R1I8 Gm27935-201ENSMUST00000183894 79 ntBASIC-2,23□□□□□ -2,77
Trav3-1Q5R1I8 Gm28008-201ENSMUST00000184021 186 ntBASIC-2,23□□□□□ -2,77
Trav3-1Q5R1I8 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC-2,23□□□□□ -2,77
Trav3-1Q5R1I8 Gm11204-201ENSMUST00000122438 147 ntBASIC-2,24□□□□□ -2,77
Trav3-1Q5R1I8 Gm25429-201ENSMUST00000157607 132 ntBASIC-2,24□□□□□ -2,77
Trav3-1Q5R1I8 Gm24051-201ENSMUST00000158622 75 ntBASIC-2,24□□□□□ -2,77
Trav3-1Q5R1I8 Gm25626-201ENSMUST00000177631 107 ntBASIC-2,24□□□□□ -2,77
Trav3-1Q5R1I8 Mir21c-201ENSMUST00000184910 78 ntBASIC-2,24□□□□□ -2,77
Trav3-1Q5R1I8 Gm12748-201ENSMUST00000120763 504 ntBASIC-2,25□□□□□ -2,77
Trav3-1Q5R1I8 Gm26424-201ENSMUST00000122530 104 ntBASIC-2,25□□□□□ -2,77
Trav3-1Q5R1I8 Gm22199-201ENSMUST00000122660 126 ntBASIC-2,25□□□□□ -2,77
Trav3-1Q5R1I8 Gm27699-201ENSMUST00000183553 180 ntBASIC-2,25□□□□□ -2,77
Trav3-1Q5R1I8 Mir201-201ENSMUST00000083470 66 ntBASIC-2,25□□□□□ -2,77
Trav3-1Q5R1I8 Gm42606-201ENSMUST00000114209 239 ntBASIC-2,26□□□□□ -2,77
Trav3-1Q5R1I8 Gm25052-201ENSMUST00000122661 158 ntBASIC-2,26□□□□□ -2,77
Trav3-1Q5R1I8 Gm24003-201ENSMUST00000158455 100 ntBASIC-2,26□□□□□ -2,77
Trav3-1Q5R1I8 Gm26287-201ENSMUST00000158887 81 ntBASIC-2,26□□□□□ -2,77
Trav3-1Q5R1I8 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC-2,26□□□□□ -2,77
Trav3-1Q5R1I8 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC-2,26□□□□□ -2,77
Trav3-1Q5R1I8 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-2,26□□□□□ -2,77
Trav3-1Q5R1I8 Gm23500-201ENSMUST00000157735 98 ntBASIC-2,27□□□□□ -2,77
Trav3-1Q5R1I8 Mir1966-201ENSMUST00000158807 108 ntBASIC-2,27□□□□□ -2,77
Trav3-1Q5R1I8 Mir509-201ENSMUST00000196089 75 ntBASIC-2,27□□□□□ -2,77
Trav3-1Q5R1I8 Gm25684-201ENSMUST00000083941 107 ntBASIC-2,27□□□□□ -2,77
Trav3-1Q5R1I8 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC-2,28□□□□□ -2,77
Trav3-1Q5R1I8 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC-2,28□□□□□ -2,77
Trav3-1Q5R1I8 Gm23219-201ENSMUST00000158123 87 ntBASIC-2,28□□□□□ -2,77
Trav3-1Q5R1I8 Mir451b-201ENSMUST00000196157 72 ntBASIC-2,28□□□□□ -2,77
Trav3-1Q5R1I8 Gm45313-201ENSMUST00000210584 178 ntBASIC-2,28□□□□□ -2,77
Trav3-1Q5R1I8 Gm26454-201ENSMUST00000082682 107 ntBASIC-2,28□□□□□ -2,77
Trav3-1Q5R1I8 Gm26360-201ENSMUST00000158872 103 ntBASIC-2,29□□□□□ -2,78
Trav3-1Q5R1I8 Traj61-201ENSMUST00000165025 72 ntBASIC-2,29□□□□□ -2,78
Trav3-1Q5R1I8 AC154552.1-201ENSMUST00000222969 202 ntBASIC-2,29□□□□□ -2,78
Trav3-1Q5R1I8 Gm22298-201ENSMUST00000082662 133 ntBASIC-2,29□□□□□ -2,78
Trav3-1Q5R1I8 Mir29a-201ENSMUST00000083676 88 ntBASIC-2,29□□□□□ -2,78
Trav3-1Q5R1I8 Gm23528-201ENSMUST00000104571 132 ntBASIC-2,31□□□□□ -2,78
Trav3-1Q5R1I8 Gm23722-201ENSMUST00000083002 130 ntBASIC-2,31□□□□□ -2,78
Trav3-1Q5R1I8 Gm25417-201ENSMUST00000104212 131 ntBASIC-2,32□□□□□ -2,78
Trav3-1Q5R1I8 Gm12013-201ENSMUST00000121971 155 ntBASIC-2,32□□□□□ -2,78
Trav3-1Q5R1I8 Gm26369-201ENSMUST00000157825 100 ntBASIC-2,32□□□□□ -2,78
Trav3-1Q5R1I8 Gm22805-201ENSMUST00000082739 107 ntBASIC-2,32□□□□□ -2,78
Trav3-1Q5R1I8 Gm25793-201ENSMUST00000083287 107 ntBASIC-2,32□□□□□ -2,78
Trav3-1Q5R1I8 Gm14502-201ENSMUST00000118154 113 ntBASIC-2,33□□□□□ -2,78
Trav3-1Q5R1I8 Gm22336-201ENSMUST00000157719 107 ntBASIC-2,33□□□□□ -2,78
Trav3-1Q5R1I8 Gm24232-201ENSMUST00000104314 132 ntBASIC-2,34□□□□□ -2,78
Trav3-1Q5R1I8 Gm23772-201ENSMUST00000104433 102 ntBASIC-2,34□□□□□ -2,78
Trav3-1Q5R1I8 Gm26393-201ENSMUST00000157625 129 ntBASIC-2,34□□□□□ -2,78
Trav3-1Q5R1I8 Gm27585-201ENSMUST00000183717 199 ntBASIC-2,34□□□□□ -2,78
Trav3-1Q5R1I8 Gm28438-201ENSMUST00000188299 345 ntBASIC-2,34□□□□□ -2,78
Trav3-1Q5R1I8 AC124739.2-201ENSMUST00000222201 109 ntBASIC-2,34□□□□□ -2,78
Trav3-1Q5R1I8 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC-2,34□□□□□ -2,78
Trav3-1Q5R1I8 Snord42a-201ENSMUST00000082606 65 ntBASIC-2,34□□□□□ -2,78
Trav3-1Q5R1I8 Mir146-201ENSMUST00000083667 65 ntBASIC-2,34□□□□□ -2,78
Trav3-1Q5R1I8 Gm25895-201ENSMUST00000083714 100 ntBASIC-2,34□□□□□ -2,78
Trav3-1Q5R1I8 Gm22365-201ENSMUST00000093750 117 ntBASIC-2,34□□□□□ -2,78
Trav3-1Q5R1I8 AC131720.2-201ENSMUST00000220420 431 ntBASIC-2,35□□□□□ -2,79
Trav3-1Q5R1I8 Gm26168-201ENSMUST00000083787 112 ntBASIC-2,35□□□□□ -2,79
Trav3-1Q5R1I8 Gm24192-201ENSMUST00000157978 145 ntBASIC-2,36□□□□□ -2,79
Trav3-1Q5R1I8 AC192616.1-201ENSMUST00000221922 132 ntBASIC-2,36□□□□□ -2,79
Trav3-1Q5R1I8 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC-2,36□□□□□ -2,79
Trav3-1Q5R1I8 Gm24423-201ENSMUST00000101982 106 ntBASIC-2,37□□□□□ -2,79
Trav3-1Q5R1I8 Mir702-201ENSMUST00000102285 109 ntBASIC-2,37□□□□□ -2,79
Trav3-1Q5R1I8 Gm25493-201ENSMUST00000157375 103 ntBASIC-2,37□□□□□ -2,79
Trav3-1Q5R1I8 Gm22089-201ENSMUST00000158336 102 ntBASIC-2,37□□□□□ -2,79
Trav3-1Q5R1I8 Gm25618-201ENSMUST00000179484 107 ntBASIC-2,37□□□□□ -2,79
Trav3-1Q5R1I8 Gm18502-201ENSMUST00000218679 199 ntBASIC-2,37□□□□□ -2,79
Trav3-1Q5R1I8 Gm25635-201ENSMUST00000082675 131 ntBASIC-2,37□□□□□ -2,79
Trav3-1Q5R1I8 Mir384-201ENSMUST00000083565 88 ntBASIC-2,37□□□□□ -2,79
Trav3-1Q5R1I8 Gm24762-201ENSMUST00000083689 104 ntBASIC-2,37□□□□□ -2,79
Retrieved 100 of 76,532 protein–RNA pairs in 115,4 ms