Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm26359-201ENSMUST00000158873 101 ntBASIC3.65□□□□□ -1.83
Trim41Q5NCC3 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC3.65□□□□□ -1.83
Trim41Q5NCC3 Gm25300-201ENSMUST00000175284 84 ntBASIC3.65□□□□□ -1.83
Trim41Q5NCC3 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC3.65□□□□□ -1.83
Trim41Q5NCC3 Gm25991-201ENSMUST00000102439 99 ntBASIC3.64□□□□□ -1.83
Trim41Q5NCC3 Gm12469-201ENSMUST00000117623 207 ntBASIC3.64□□□□□ -1.83
Trim41Q5NCC3 Mir3057-201ENSMUST00000175040 91 ntBASIC3.64□□□□□ -1.83
Trim41Q5NCC3 Mir6901-201ENSMUST00000185062 62 ntBASIC3.64□□□□□ -1.83
Trim41Q5NCC3 AC157278.1-201ENSMUST00000221621 148 ntBASIC3.64□□□□□ -1.83
Trim41Q5NCC3 Gm22544-201ENSMUST00000104349 127 ntBASIC3.63□□□□□ -1.83
Trim41Q5NCC3 Gm26301-201ENSMUST00000104813 95 ntBASIC3.63□□□□□ -1.83
Trim41Q5NCC3 Gm23661-201ENSMUST00000122630 87 ntBASIC3.63□□□□□ -1.83
Trim41Q5NCC3 Gm44458-201ENSMUST00000196594 143 ntBASIC3.63□□□□□ -1.83
Trim41Q5NCC3 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC3.63□□□□□ -1.83
Trim41Q5NCC3 Gm43885-201ENSMUST00000204928 2542 ntBASIC3.62□□□□□ -1.83
Trim41Q5NCC3 Snord71-201ENSMUST00000104361 85 ntBASIC3.62□□□□□ -1.83
Trim41Q5NCC3 Gm22802-201ENSMUST00000175621 89 ntBASIC3.62□□□□□ -1.83
Trim41Q5NCC3 Mir7679-201ENSMUST00000183379 63 ntBASIC3.62□□□□□ -1.83
Trim41Q5NCC3 Gm27979-201ENSMUST00000185126 56 ntBASIC3.62□□□□□ -1.83
Trim41Q5NCC3 Gm38295-201ENSMUST00000191951 151 ntBASIC3.62□□□□□ -1.83
Trim41Q5NCC3 Gm24201-201ENSMUST00000082946 125 ntBASIC3.62□□□□□ -1.83
Trim41Q5NCC3 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Trim41Q5NCC3 Gm26473-201ENSMUST00000116763 127 ntBASIC3.6□□□□□ -1.83
Trim41Q5NCC3 Gm23170-201ENSMUST00000157158 106 ntBASIC3.6□□□□□ -1.83
Trim41Q5NCC3 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Trim41Q5NCC3 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Trim41Q5NCC3 Mir5104-201ENSMUST00000175319 94 ntBASIC3.59□□□□□ -1.83
Trim41Q5NCC3 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC3.59□□□□□ -1.83
Trim41Q5NCC3 Gm24624-201ENSMUST00000082617 164 ntBASIC3.59□□□□□ -1.83
Trim41Q5NCC3 Gm16510-201ENSMUST00000153501 249 ntBASIC3.58□□□□□ -1.84
Trim41Q5NCC3 Gm27656-201ENSMUST00000185055 80 ntBASIC3.58□□□□□ -1.84
Trim41Q5NCC3 Snord43-201ENSMUST00000199549 108 ntBASIC3.58□□□□□ -1.84
Trim41Q5NCC3 Gm25796-201ENSMUST00000082645 163 ntBASIC3.58□□□□□ -1.84
Trim41Q5NCC3 Gm22753-201ENSMUST00000083657 107 ntBASIC3.58□□□□□ -1.84
Trim41Q5NCC3 Gm13231-201ENSMUST00000119218 2850 ntBASIC3.56□□□□□ -1.84
Trim41Q5NCC3 Gm11857-201ENSMUST00000119817 324 ntBASIC3.56□□□□□ -1.84
Trim41Q5NCC3 Gm24009-201ENSMUST00000157734 93 ntBASIC3.56□□□□□ -1.84
Trim41Q5NCC3 Mir7232-201ENSMUST00000197929 74 ntBASIC3.56□□□□□ -1.84
Trim41Q5NCC3 Snord60-201ENSMUST00000082834 78 ntBASIC3.56□□□□□ -1.84
Trim41Q5NCC3 Mir151-201ENSMUST00000083678 68 ntBASIC3.56□□□□□ -1.84
Trim41Q5NCC3 Snord45b-201ENSMUST00000082797 71 ntBASIC3.55□□□□□ -1.84
Trim41Q5NCC3 Gm43484-201ENSMUST00000198333 5966 ntBASIC3.55□□□□□ -1.84
Trim41Q5NCC3 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Trim41Q5NCC3 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Trim41Q5NCC3 Gm27450-201ENSMUST00000104632 90 ntBASIC3.54□□□□□ -1.84
Trim41Q5NCC3 Gm22727-201ENSMUST00000158090 116 ntBASIC3.54□□□□□ -1.84
Trim41Q5NCC3 Snord87-201ENSMUST00000175437 87 ntBASIC3.54□□□□□ -1.84
Trim41Q5NCC3 Mir423-201ENSMUST00000083584 109 ntBASIC3.54□□□□□ -1.84
Trim41Q5NCC3 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
Trim41Q5NCC3 Mir741-201ENSMUST00000103931 71 ntBASIC3.53□□□□□ -1.84
Trim41Q5NCC3 Gm25994-201ENSMUST00000175392 101 ntBASIC3.53□□□□□ -1.84
Trim41Q5NCC3 Mir7016-201ENSMUST00000184308 72 ntBASIC3.53□□□□□ -1.84
Trim41Q5NCC3 Snord104-201ENSMUST00000083192 70 ntBASIC3.53□□□□□ -1.84
Trim41Q5NCC3 Mir300-201ENSMUST00000083485 79 ntBASIC3.53□□□□□ -1.84
Trim41Q5NCC3 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Trim41Q5NCC3 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
Trim41Q5NCC3 Gm23881-201ENSMUST00000116872 66 ntBASIC3.52□□□□□ -1.85
Trim41Q5NCC3 Mir1949-201ENSMUST00000157434 141 ntBASIC3.52□□□□□ -1.85
Trim41Q5NCC3 Gm23649-201ENSMUST00000179007 107 ntBASIC3.52□□□□□ -1.85
Trim41Q5NCC3 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Trim41Q5NCC3 Mir297-1-201ENSMUST00000103800 76 ntBASIC3.51□□□□□ -1.85
Trim41Q5NCC3 Gm24902-201ENSMUST00000158126 123 ntBASIC3.51□□□□□ -1.85
Trim41Q5NCC3 Mir7059-201ENSMUST00000184825 59 ntBASIC3.51□□□□□ -1.85
Trim41Q5NCC3 Gm24401-201ENSMUST00000157868 91 ntBASIC3.5□□□□□ -1.85
Trim41Q5NCC3 Gm22403-201ENSMUST00000174919 84 ntBASIC3.5□□□□□ -1.85
Trim41Q5NCC3 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Trim41Q5NCC3 Gm15692-201ENSMUST00000152173 352 ntBASIC3.49□□□□□ -1.85
Trim41Q5NCC3 Gm22083-201ENSMUST00000157586 102 ntBASIC3.49□□□□□ -1.85
Trim41Q5NCC3 Gm23342-201ENSMUST00000158958 115 ntBASIC3.49□□□□□ -1.85
Trim41Q5NCC3 Gm24202-201ENSMUST00000082948 103 ntBASIC3.48□□□□□ -1.85
Trim41Q5NCC3 Mir126a-201ENSMUST00000083606 73 ntBASIC3.48□□□□□ -1.85
Trim41Q5NCC3 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Trim41Q5NCC3 Gm22039-201ENSMUST00000157278 132 ntBASIC3.47□□□□□ -1.85
Trim41Q5NCC3 Gm25831-201ENSMUST00000158924 163 ntBASIC3.47□□□□□ -1.85
Trim41Q5NCC3 Gm28862-201ENSMUST00000188246 163 ntBASIC3.47□□□□□ -1.85
Trim41Q5NCC3 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Trim41Q5NCC3 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Trim41Q5NCC3 Gm6985-201ENSMUST00000121255 271 ntBASIC3.46□□□□□ -1.86
Trim41Q5NCC3 Gm24728-201ENSMUST00000158226 125 ntBASIC3.46□□□□□ -1.86
Trim41Q5NCC3 Gm27297-201ENSMUST00000183395 105 ntBASIC3.46□□□□□ -1.86
Trim41Q5NCC3 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Trim41Q5NCC3 Gm22340-201ENSMUST00000157717 114 ntBASIC3.45□□□□□ -1.86
Trim41Q5NCC3 Gm24677-201ENSMUST00000158755 150 ntBASIC3.45□□□□□ -1.86
Trim41Q5NCC3 Gm26158-201ENSMUST00000158973 119 ntBASIC3.45□□□□□ -1.86
Trim41Q5NCC3 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Trim41Q5NCC3 n-R5s63-201ENSMUST00000122756 103 ntBASIC3.44□□□□□ -1.86
Trim41Q5NCC3 Gm24478-201ENSMUST00000157439 158 ntBASIC3.44□□□□□ -1.86
Trim41Q5NCC3 Gm23033-201ENSMUST00000157996 134 ntBASIC3.44□□□□□ -1.86
Trim41Q5NCC3 Gm25600-201ENSMUST00000158357 106 ntBASIC3.44□□□□□ -1.86
Trim41Q5NCC3 Gm22887-201ENSMUST00000178586 107 ntBASIC3.44□□□□□ -1.86
Trim41Q5NCC3 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Trim41Q5NCC3 Gm25183-201ENSMUST00000157752 106 ntBASIC3.43□□□□□ -1.86
Trim41Q5NCC3 Mir7079-201ENSMUST00000184697 69 ntBASIC3.43□□□□□ -1.86
Trim41Q5NCC3 Gm24134-201ENSMUST00000083361 71 ntBASIC3.43□□□□□ -1.86
Trim41Q5NCC3 Snora69-201ENSMUST00000083708 131 ntBASIC3.43□□□□□ -1.86
Trim41Q5NCC3 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC3.42□□□□□ -1.86
Trim41Q5NCC3 Mir6962-201ENSMUST00000199512 63 ntBASIC3.42□□□□□ -1.86
Trim41Q5NCC3 Gm24927-201ENSMUST00000083397 107 ntBASIC3.42□□□□□ -1.86
Trim41Q5NCC3 Gm22565-201ENSMUST00000175540 69 ntBASIC3.41□□□□□ -1.86
Trim41Q5NCC3 Gm44469-201ENSMUST00000198558 79 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 134.6 ms