Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Gm27285-201ENSMUST00000183875 127 ntBASIC-3.27□□□□□ -2.93
Ccdc88bQ4QRL3 Mir21c-201ENSMUST00000184910 78 ntBASIC-3.27□□□□□ -2.93
Ccdc88bQ4QRL3 Gm44142-201ENSMUST00000203358 311 ntBASIC-3.27□□□□□ -2.93
Ccdc88bQ4QRL3 Gm24449-201ENSMUST00000083985 106 ntBASIC-3.27□□□□□ -2.93
Ccdc88bQ4QRL3 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC-3.27□□□□□ -2.93
Ccdc88bQ4QRL3 Gm25089-201ENSMUST00000102015 79 ntBASIC-3.28□□□□□ -2.93
Ccdc88bQ4QRL3 Mir669g-201ENSMUST00000116809 123 ntBASIC-3.28□□□□□ -2.93
Ccdc88bQ4QRL3 Gm24673-201ENSMUST00000116948 124 ntBASIC-3.28□□□□□ -2.93
Ccdc88bQ4QRL3 Gm23173-201ENSMUST00000157161 160 ntBASIC-3.28□□□□□ -2.93
Ccdc88bQ4QRL3 Gm22336-201ENSMUST00000157719 107 ntBASIC-3.28□□□□□ -2.93
Ccdc88bQ4QRL3 Gm25840-201ENSMUST00000177821 79 ntBASIC-3.28□□□□□ -2.93
Ccdc88bQ4QRL3 Gm26426-201ENSMUST00000177866 123 ntBASIC-3.28□□□□□ -2.93
Ccdc88bQ4QRL3 Gm24952-201ENSMUST00000177909 79 ntBASIC-3.28□□□□□ -2.93
Ccdc88bQ4QRL3 Gm23682-201ENSMUST00000178146 79 ntBASIC-3.28□□□□□ -2.93
Ccdc88bQ4QRL3 Gm24652-201ENSMUST00000178223 79 ntBASIC-3.28□□□□□ -2.93
Ccdc88bQ4QRL3 Gm22629-201ENSMUST00000178272 79 ntBASIC-3.28□□□□□ -2.93
Ccdc88bQ4QRL3 Gm23108-201ENSMUST00000178295 124 ntBASIC-3.28□□□□□ -2.93
Ccdc88bQ4QRL3 Gm24021-201ENSMUST00000178435 79 ntBASIC-3.28□□□□□ -2.93
Ccdc88bQ4QRL3 Gm22274-201ENSMUST00000178441 79 ntBASIC-3.28□□□□□ -2.93
Ccdc88bQ4QRL3 Gm22050-201ENSMUST00000178442 79 ntBASIC-3.28□□□□□ -2.93
Ccdc88bQ4QRL3 Gm23688-201ENSMUST00000178502 79 ntBASIC-3.28□□□□□ -2.93
Ccdc88bQ4QRL3 Gm23944-201ENSMUST00000178607 79 ntBASIC-3.28□□□□□ -2.93
Ccdc88bQ4QRL3 Gm26283-201ENSMUST00000178625 79 ntBASIC-3.28□□□□□ -2.93
Ccdc88bQ4QRL3 Gm25452-201ENSMUST00000178776 79 ntBASIC-3.28□□□□□ -2.93
Ccdc88bQ4QRL3 Gm23286-201ENSMUST00000178963 79 ntBASIC-3.28□□□□□ -2.93
Ccdc88bQ4QRL3 Gm22640-201ENSMUST00000179035 79 ntBASIC-3.28□□□□□ -2.93
Ccdc88bQ4QRL3 Gm25984-201ENSMUST00000179129 79 ntBASIC-3.28□□□□□ -2.93
Ccdc88bQ4QRL3 Gm25585-201ENSMUST00000179469 79 ntBASIC-3.28□□□□□ -2.93
Ccdc88bQ4QRL3 Gm26374-201ENSMUST00000179737 79 ntBASIC-3.28□□□□□ -2.93
Ccdc88bQ4QRL3 Gm24040-201ENSMUST00000179786 79 ntBASIC-3.28□□□□□ -2.93
Ccdc88bQ4QRL3 Gm25017-201ENSMUST00000179805 79 ntBASIC-3.28□□□□□ -2.93
Ccdc88bQ4QRL3 Gm23618-201ENSMUST00000179912 79 ntBASIC-3.28□□□□□ -2.93
Ccdc88bQ4QRL3 Gm26060-201ENSMUST00000180094 123 ntBASIC-3.28□□□□□ -2.93
Ccdc88bQ4QRL3 Gm26284-201ENSMUST00000180107 79 ntBASIC-3.28□□□□□ -2.93
Ccdc88bQ4QRL3 Gm24570-201ENSMUST00000180314 79 ntBASIC-3.28□□□□□ -2.93
Ccdc88bQ4QRL3 Gm24654-201ENSMUST00000180315 79 ntBASIC-3.28□□□□□ -2.93
Ccdc88bQ4QRL3 Gm44726-201ENSMUST00000203427 217 ntBASIC-3.28□□□□□ -2.93
Ccdc88bQ4QRL3 Gm23448-201ENSMUST00000083151 104 ntBASIC-3.28□□□□□ -2.93
Ccdc88bQ4QRL3 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC-3.28□□□□□ -2.93
Ccdc88bQ4QRL3 Gm5034-201ENSMUST00000199115 634 ntBASIC-3.28□□□□□ -2.94
Ccdc88bQ4QRL3 Mir485-201ENSMUST00000093620 73 ntBASIC-3.28□□□□□ -2.94
Ccdc88bQ4QRL3 Mir7673-201ENSMUST00000184567 64 ntBASIC-3.29□□□□□ -2.94
Ccdc88bQ4QRL3 Gm26122-201ENSMUST00000083362 82 ntBASIC-3.29□□□□□ -2.94
Ccdc88bQ4QRL3 Gm29513-201ENSMUST00000185741 202 ntBASIC-3.3□□□□□ -2.94
Ccdc88bQ4QRL3 Gm25943-201ENSMUST00000103791 90 ntBASIC-3.31□□□□□ -2.94
Ccdc88bQ4QRL3 Mir466o-201ENSMUST00000104832 84 ntBASIC-3.31□□□□□ -2.94
Ccdc88bQ4QRL3 Gm22197-201ENSMUST00000116866 58 ntBASIC-3.31□□□□□ -2.94
Ccdc88bQ4QRL3 Mir466b-4-201ENSMUST00000178801 90 ntBASIC-3.31□□□□□ -2.94
Ccdc88bQ4QRL3 Gm25618-201ENSMUST00000179484 107 ntBASIC-3.31□□□□□ -2.94
Ccdc88bQ4QRL3 Mir466b-6-201ENSMUST00000180061 90 ntBASIC-3.31□□□□□ -2.94
Ccdc88bQ4QRL3 Mir470-201ENSMUST00000093565 75 ntBASIC-3.31□□□□□ -2.94
Ccdc88bQ4QRL3 Gm24988-201ENSMUST00000104460 121 ntBASIC-3.32□□□□□ -2.94
Ccdc88bQ4QRL3 Gm25229-201ENSMUST00000178587 79 ntBASIC-3.32□□□□□ -2.94
Ccdc88bQ4QRL3 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC-3.32□□□□□ -2.94
Ccdc88bQ4QRL3 Gm26160-201ENSMUST00000158965 63 ntBASIC-3.33□□□□□ -2.94
Ccdc88bQ4QRL3 Mir190b-201ENSMUST00000104803 80 ntBASIC-3.34□□□□□ -2.94
Ccdc88bQ4QRL3 Gm23240-201ENSMUST00000083009 121 ntBASIC-3.34□□□□□ -2.94
Ccdc88bQ4QRL3 Gm26164-201ENSMUST00000083793 104 ntBASIC-3.34□□□□□ -2.94
Ccdc88bQ4QRL3 AC157602.1-201ENSMUST00000197446 105 ntBASIC-3.35□□□□□ -2.94
Ccdc88bQ4QRL3 AC159896.1-201ENSMUST00000215264 215 ntBASIC-3.35□□□□□ -2.94
Ccdc88bQ4QRL3 Gm25634-201ENSMUST00000082667 105 ntBASIC-3.35□□□□□ -2.94
Ccdc88bQ4QRL3 Gm24765-201ENSMUST00000083691 103 ntBASIC-3.35□□□□□ -2.94
Ccdc88bQ4QRL3 Gm24070-201ENSMUST00000104519 130 ntBASIC-3.35□□□□□ -2.95
Ccdc88bQ4QRL3 Mir3094-201ENSMUST00000175121 64 ntBASIC-3.35□□□□□ -2.95
Ccdc88bQ4QRL3 Gm25158-201ENSMUST00000177681 121 ntBASIC-3.35□□□□□ -2.95
Ccdc88bQ4QRL3 Gm26229-201ENSMUST00000179699 121 ntBASIC-3.35□□□□□ -2.95
Ccdc88bQ4QRL3 Gm23507-201ENSMUST00000083078 107 ntBASIC-3.35□□□□□ -2.95
Ccdc88bQ4QRL3 Snord38a-201ENSMUST00000083746 71 ntBASIC-3.35□□□□□ -2.95
Ccdc88bQ4QRL3 Gm25313-201ENSMUST00000101817 116 ntBASIC-3.36□□□□□ -2.95
Ccdc88bQ4QRL3 Gm25716-201ENSMUST00000158628 104 ntBASIC-3.36□□□□□ -2.95
Ccdc88bQ4QRL3 Gm23287-201ENSMUST00000179427 116 ntBASIC-3.36□□□□□ -2.95
Ccdc88bQ4QRL3 Gm23143-201ENSMUST00000180137 116 ntBASIC-3.36□□□□□ -2.95
Ccdc88bQ4QRL3 Gm44923-201ENSMUST00000206673 85 ntBASIC-3.36□□□□□ -2.95
Ccdc88bQ4QRL3 Gm22357-201ENSMUST00000082882 83 ntBASIC-3.36□□□□□ -2.95
Ccdc88bQ4QRL3 Gm24871-201ENSMUST00000083099 116 ntBASIC-3.36□□□□□ -2.95
Ccdc88bQ4QRL3 Rnu5g-201ENSMUST00000093721 116 ntBASIC-3.36□□□□□ -2.95
Ccdc88bQ4QRL3 Gm23142-201ENSMUST00000101848 105 ntBASIC-3.37□□□□□ -2.95
Ccdc88bQ4QRL3 Gm26240-201ENSMUST00000101893 105 ntBASIC-3.37□□□□□ -2.95
Ccdc88bQ4QRL3 Gm23982-201ENSMUST00000157141 106 ntBASIC-3.37□□□□□ -2.95
Ccdc88bQ4QRL3 Gm25440-201ENSMUST00000158279 154 ntBASIC-3.37□□□□□ -2.95
Ccdc88bQ4QRL3 Traj61-201ENSMUST00000165025 72 ntBASIC-3.37□□□□□ -2.95
Ccdc88bQ4QRL3 Gm25615-201ENSMUST00000177836 94 ntBASIC-3.37□□□□□ -2.95
Ccdc88bQ4QRL3 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC-3.37□□□□□ -2.95
Ccdc88bQ4QRL3 Gm24204-201ENSMUST00000082950 107 ntBASIC-3.37□□□□□ -2.95
Ccdc88bQ4QRL3 AC192091.2-201ENSMUST00000217869 117 ntBASIC-3.38□□□□□ -2.95
Ccdc88bQ4QRL3 Gm23445-201ENSMUST00000082800 107 ntBASIC-3.38□□□□□ -2.95
Ccdc88bQ4QRL3 Gm25023-201ENSMUST00000082977 107 ntBASIC-3.38□□□□□ -2.95
Ccdc88bQ4QRL3 Gm24185-201ENSMUST00000122578 105 ntBASIC-3.39□□□□□ -2.95
Ccdc88bQ4QRL3 Gm23859-201ENSMUST00000158383 64 ntBASIC-3.39□□□□□ -2.95
Ccdc88bQ4QRL3 AL772265.1-201ENSMUST00000214379 305 ntBASIC-3.39□□□□□ -2.95
Ccdc88bQ4QRL3 Gm22148-201ENSMUST00000104445 107 ntBASIC-3.4□□□□□ -2.95
Ccdc88bQ4QRL3 Gm44858-201ENSMUST00000207360 154 ntBASIC-3.4□□□□□ -2.95
Ccdc88bQ4QRL3 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC-3.4□□□□□ -2.95
Ccdc88bQ4QRL3 Mir541-201ENSMUST00000102097 90 ntBASIC-3.41□□□□□ -2.95
Ccdc88bQ4QRL3 Gm12013-201ENSMUST00000121971 155 ntBASIC-3.41□□□□□ -2.95
Ccdc88bQ4QRL3 Gm37763-201ENSMUST00000193445 120 ntBASIC-3.41□□□□□ -2.95
Ccdc88bQ4QRL3 Mir367-201ENSMUST00000083479 75 ntBASIC-3.41□□□□□ -2.95
Ccdc88bQ4QRL3 Mir488-201ENSMUST00000093595 109 ntBASIC-3.41□□□□□ -2.96
Ccdc88bQ4QRL3 Gm11835-201ENSMUST00000120635 663 ntBASIC-3.42□□□□□ -2.96
Ccdc88bQ4QRL3 Gm13797-201ENSMUST00000121792 120 ntBASIC-3.42□□□□□ -2.96
Retrieved 100 of 76,532 protein–RNA pairs in 156.2 ms