Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 Gm28767-201ENSMUST00000188601 114 ntBASIC1.37□□□□□ -2.19
Ddb1Q3U1J4 Gm24865-201ENSMUST00000103246 96 ntBASIC1.36□□□□□ -2.19
Ddb1Q3U1J4 AC166341.8-201ENSMUST00000221267 108 ntBASIC1.36□□□□□ -2.19
Ddb1Q3U1J4 AC159093.2-201ENSMUST00000227881 297 ntBASIC1.36□□□□□ -2.19
Ddb1Q3U1J4 Gm24099-201ENSMUST00000083384 107 ntBASIC1.36□□□□□ -2.19
Ddb1Q3U1J4 Mir20b-201ENSMUST00000102087 80 ntBASIC1.35□□□□□ -2.19
Ddb1Q3U1J4 Mir1191-201ENSMUST00000116883 120 ntBASIC1.35□□□□□ -2.19
Ddb1Q3U1J4 Gm25289-201ENSMUST00000122799 119 ntBASIC1.35□□□□□ -2.19
Ddb1Q3U1J4 Gm22233-201ENSMUST00000157464 114 ntBASIC1.35□□□□□ -2.19
Ddb1Q3U1J4 Gm23783-201ENSMUST00000157941 102 ntBASIC1.35□□□□□ -2.19
Ddb1Q3U1J4 Gm25868-201ENSMUST00000158253 114 ntBASIC1.35□□□□□ -2.19
Ddb1Q3U1J4 Gm22089-201ENSMUST00000158336 102 ntBASIC1.35□□□□□ -2.19
Ddb1Q3U1J4 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC1.35□□□□□ -2.19
Ddb1Q3U1J4 Mir6237-201ENSMUST00000183808 91 ntBASIC1.35□□□□□ -2.19
Ddb1Q3U1J4 Gm29535-201ENSMUST00000185723 109 ntBASIC1.35□□□□□ -2.19
Ddb1Q3U1J4 Gm28143-201ENSMUST00000191082 109 ntBASIC1.35□□□□□ -2.19
Ddb1Q3U1J4 Gm44932-201ENSMUST00000206799 121 ntBASIC1.35□□□□□ -2.19
Ddb1Q3U1J4 Gm25128-201ENSMUST00000083339 76 ntBASIC1.35□□□□□ -2.19
Ddb1Q3U1J4 Mir22-201ENSMUST00000083595 95 ntBASIC1.35□□□□□ -2.19
Ddb1Q3U1J4 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.35□□□□□ -2.19
Ddb1Q3U1J4 Gm24271-201ENSMUST00000102327 111 ntBASIC1.34□□□□□ -2.19
Ddb1Q3U1J4 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
Ddb1Q3U1J4 Mir1899-201ENSMUST00000122798 96 ntBASIC1.34□□□□□ -2.19
Ddb1Q3U1J4 Gm23601-201ENSMUST00000157259 131 ntBASIC1.34□□□□□ -2.19
Ddb1Q3U1J4 Gm24223-201ENSMUST00000158827 90 ntBASIC1.34□□□□□ -2.19
Ddb1Q3U1J4 Gm26398-201ENSMUST00000179015 127 ntBASIC1.34□□□□□ -2.19
Ddb1Q3U1J4 Mir7079-201ENSMUST00000184697 69 ntBASIC1.34□□□□□ -2.19
Ddb1Q3U1J4 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC1.34□□□□□ -2.19
Ddb1Q3U1J4 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC1.34□□□□□ -2.19
Ddb1Q3U1J4 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC1.34□□□□□ -2.19
Ddb1Q3U1J4 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC1.34□□□□□ -2.19
Ddb1Q3U1J4 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC1.34□□□□□ -2.19
Ddb1Q3U1J4 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC1.34□□□□□ -2.19
Ddb1Q3U1J4 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC1.34□□□□□ -2.19
Ddb1Q3U1J4 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC1.34□□□□□ -2.19
Ddb1Q3U1J4 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC1.34□□□□□ -2.19
Ddb1Q3U1J4 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC1.34□□□□□ -2.19
Ddb1Q3U1J4 Gm25635-201ENSMUST00000082675 131 ntBASIC1.34□□□□□ -2.19
Ddb1Q3U1J4 n-R5s157-201ENSMUST00000122543 121 ntBASIC1.33□□□□□ -2.2
Ddb1Q3U1J4 Gm24728-201ENSMUST00000158226 125 ntBASIC1.33□□□□□ -2.2
Ddb1Q3U1J4 Mir3083-201ENSMUST00000175377 64 ntBASIC1.33□□□□□ -2.2
Ddb1Q3U1J4 Gm23790-201ENSMUST00000083013 107 ntBASIC1.33□□□□□ -2.2
Ddb1Q3U1J4 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
Ddb1Q3U1J4 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
Ddb1Q3U1J4 Gm22729-201ENSMUST00000158088 129 ntBASIC1.32□□□□□ -2.2
Ddb1Q3U1J4 Gm23261-201ENSMUST00000158316 136 ntBASIC1.32□□□□□ -2.2
Ddb1Q3U1J4 Gm26104-201ENSMUST00000157250 108 ntBASIC1.31□□□□□ -2.2
Ddb1Q3U1J4 Gm22706-201ENSMUST00000157907 112 ntBASIC1.31□□□□□ -2.2
Ddb1Q3U1J4 Gm22485-201ENSMUST00000157990 109 ntBASIC1.31□□□□□ -2.2
Ddb1Q3U1J4 Gm27419-201ENSMUST00000184576 109 ntBASIC1.31□□□□□ -2.2
Ddb1Q3U1J4 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC1.31□□□□□ -2.2
Ddb1Q3U1J4 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
Ddb1Q3U1J4 Gm26089-201ENSMUST00000157898 107 ntBASIC1.3□□□□□ -2.2
Ddb1Q3U1J4 Gm22515-201ENSMUST00000158273 305 ntBASIC1.3□□□□□ -2.2
Ddb1Q3U1J4 Gm24547-201ENSMUST00000158649 149 ntBASIC1.3□□□□□ -2.2
Ddb1Q3U1J4 Gm44602-201ENSMUST00000205948 132 ntBASIC1.3□□□□□ -2.2
Ddb1Q3U1J4 Gm24311-201ENSMUST00000082570 104 ntBASIC1.3□□□□□ -2.2
Ddb1Q3U1J4 Gm22950-201ENSMUST00000082776 107 ntBASIC1.3□□□□□ -2.2
Ddb1Q3U1J4 Gm26109-201ENSMUST00000083970 70 ntBASIC1.3□□□□□ -2.2
Ddb1Q3U1J4 Gm25110-201ENSMUST00000116684 121 ntBASIC1.29□□□□□ -2.2
Ddb1Q3U1J4 Gm25775-201ENSMUST00000116716 121 ntBASIC1.29□□□□□ -2.2
Ddb1Q3U1J4 Gm24795-201ENSMUST00000116737 121 ntBASIC1.29□□□□□ -2.2
Ddb1Q3U1J4 Gm25171-201ENSMUST00000116926 121 ntBASIC1.29□□□□□ -2.2
Ddb1Q3U1J4 Gm23817-201ENSMUST00000158449 104 ntBASIC1.29□□□□□ -2.2
Ddb1Q3U1J4 Gm22074-201ENSMUST00000158595 113 ntBASIC1.29□□□□□ -2.2
Ddb1Q3U1J4 Mir7091-201ENSMUST00000184075 79 ntBASIC1.29□□□□□ -2.2
Ddb1Q3U1J4 Mir219b-201ENSMUST00000198317 65 ntBASIC1.29□□□□□ -2.2
Ddb1Q3U1J4 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
Ddb1Q3U1J4 Gm22354-201ENSMUST00000083919 70 ntBASIC1.29□□□□□ -2.2
Ddb1Q3U1J4 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
Ddb1Q3U1J4 Mir6390-201ENSMUST00000184405 129 ntBASIC1.28□□□□□ -2.2
Ddb1Q3U1J4 Gm24579-201ENSMUST00000103964 144 ntBASIC1.27□□□□□ -2.21
Ddb1Q3U1J4 Gm26274-201ENSMUST00000157103 321 ntBASIC1.27□□□□□ -2.21
Ddb1Q3U1J4 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC1.27□□□□□ -2.21
Ddb1Q3U1J4 Gm45197-201ENSMUST00000205288 151 ntBASIC1.27□□□□□ -2.21
Ddb1Q3U1J4 AC132833.2-201ENSMUST00000228699 157 ntBASIC1.27□□□□□ -2.21
Ddb1Q3U1J4 Gm23038-201ENSMUST00000083873 104 ntBASIC1.27□□□□□ -2.21
Ddb1Q3U1J4 Gm23126-201ENSMUST00000104260 134 ntBASIC1.26□□□□□ -2.21
Ddb1Q3U1J4 Gm13577-201ENSMUST00000121365 205 ntBASIC1.26□□□□□ -2.21
Ddb1Q3U1J4 Gm24221-201ENSMUST00000158833 313 ntBASIC1.26□□□□□ -2.21
Ddb1Q3U1J4 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
Ddb1Q3U1J4 Snord60-201ENSMUST00000082834 78 ntBASIC1.26□□□□□ -2.21
Ddb1Q3U1J4 Gm22672-201ENSMUST00000104414 134 ntBASIC1.25□□□□□ -2.21
Ddb1Q3U1J4 Gm23881-201ENSMUST00000116872 66 ntBASIC1.25□□□□□ -2.21
Ddb1Q3U1J4 Mir1933-201ENSMUST00000158930 88 ntBASIC1.25□□□□□ -2.21
Ddb1Q3U1J4 Gm25337-201ENSMUST00000083723 104 ntBASIC1.25□□□□□ -2.21
Ddb1Q3U1J4 Gm24445-201ENSMUST00000083981 107 ntBASIC1.25□□□□□ -2.21
Ddb1Q3U1J4 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC1.24□□□□□ -2.21
Ddb1Q3U1J4 Gm23482-201ENSMUST00000104172 122 ntBASIC1.24□□□□□ -2.21
Ddb1Q3U1J4 Gm11694-201ENSMUST00000118637 159 ntBASIC1.24□□□□□ -2.21
Ddb1Q3U1J4 Gm24476-201ENSMUST00000157437 131 ntBASIC1.24□□□□□ -2.21
Ddb1Q3U1J4 Gm24399-201ENSMUST00000157869 74 ntBASIC1.24□□□□□ -2.21
Ddb1Q3U1J4 Gm42533-201ENSMUST00000196247 157 ntBASIC1.24□□□□□ -2.21
Ddb1Q3U1J4 Gm44488-201ENSMUST00000199467 119 ntBASIC1.24□□□□□ -2.21
Ddb1Q3U1J4 AC140930.2-201ENSMUST00000221803 109 ntBASIC1.24□□□□□ -2.21
Ddb1Q3U1J4 Gm22679-201ENSMUST00000116975 100 ntBASIC1.23□□□□□ -2.21
Ddb1Q3U1J4 Gm25968-201ENSMUST00000157167 100 ntBASIC1.23□□□□□ -2.21
Ddb1Q3U1J4 Gm26363-201ENSMUST00000158866 83 ntBASIC1.23□□□□□ -2.21
Ddb1Q3U1J4 Gm23917-201ENSMUST00000175256 98 ntBASIC1.23□□□□□ -2.21
Ddb1Q3U1J4 Gm22753-201ENSMUST00000083657 107 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 196.6 ms