Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Gm20118-201ENSMUST00000187207 162 ntBASIC1.57□□□□□ -2.16
Ccbe1Q3MI99 AC157602.1-201ENSMUST00000197446 105 ntBASIC1.57□□□□□ -2.16
Ccbe1Q3MI99 Gm44408-201ENSMUST00000200205 66 ntBASIC1.57□□□□□ -2.16
Ccbe1Q3MI99 AC122769.2-201ENSMUST00000227248 302 ntBASIC1.57□□□□□ -2.16
Ccbe1Q3MI99 Mir758-201ENSMUST00000103260 81 ntBASIC1.56□□□□□ -2.16
Ccbe1Q3MI99 Gm23482-201ENSMUST00000104172 122 ntBASIC1.56□□□□□ -2.16
Ccbe1Q3MI99 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Ccbe1Q3MI99 Gm24588-201ENSMUST00000116696 83 ntBASIC1.56□□□□□ -2.16
Ccbe1Q3MI99 Gm26133-201ENSMUST00000157363 100 ntBASIC1.56□□□□□ -2.16
Ccbe1Q3MI99 Gm26358-201ENSMUST00000158215 97 ntBASIC1.56□□□□□ -2.16
Ccbe1Q3MI99 Gm24366-201ENSMUST00000175383 86 ntBASIC1.56□□□□□ -2.16
Ccbe1Q3MI99 Gm37579-201ENSMUST00000194291 142 ntBASIC1.56□□□□□ -2.16
Ccbe1Q3MI99 Mir3087-201ENSMUST00000199405 56 ntBASIC1.56□□□□□ -2.16
Ccbe1Q3MI99 Gm44602-201ENSMUST00000205948 132 ntBASIC1.56□□□□□ -2.16
Ccbe1Q3MI99 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.56□□□□□ -2.16
Ccbe1Q3MI99 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC1.55□□□□□ -2.16
Ccbe1Q3MI99 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.55□□□□□ -2.16
Ccbe1Q3MI99 Mir3064-201ENSMUST00000175532 67 ntBASIC1.55□□□□□ -2.16
Ccbe1Q3MI99 Gm26712-201ENSMUST00000180813 217 ntBASIC1.55□□□□□ -2.16
Ccbe1Q3MI99 Gm27898-201ENSMUST00000183987 80 ntBASIC1.55□□□□□ -2.16
Ccbe1Q3MI99 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
Ccbe1Q3MI99 Gm24098-201ENSMUST00000102075 109 ntBASIC1.54□□□□□ -2.16
Ccbe1Q3MI99 Gm25381-201ENSMUST00000102078 109 ntBASIC1.54□□□□□ -2.16
Ccbe1Q3MI99 Gm22200-201ENSMUST00000158614 67 ntBASIC1.54□□□□□ -2.16
Ccbe1Q3MI99 Gm23208-201ENSMUST00000158666 127 ntBASIC1.54□□□□□ -2.16
Ccbe1Q3MI99 Gm27493-201ENSMUST00000184128 78 ntBASIC1.54□□□□□ -2.16
Ccbe1Q3MI99 Gm27443-201ENSMUST00000184660 98 ntBASIC1.54□□□□□ -2.16
Ccbe1Q3MI99 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC1.54□□□□□ -2.16
Ccbe1Q3MI99 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.54□□□□□ -2.16
Ccbe1Q3MI99 Mir29a-201ENSMUST00000083676 88 ntBASIC1.54□□□□□ -2.16
Ccbe1Q3MI99 Gm25552-201ENSMUST00000158081 91 ntBASIC1.53□□□□□ -2.16
Ccbe1Q3MI99 Gm25838-201ENSMUST00000158920 120 ntBASIC1.53□□□□□ -2.16
Ccbe1Q3MI99 Gm28435-201ENSMUST00000185496 108 ntBASIC1.53□□□□□ -2.16
Ccbe1Q3MI99 Gm29047-201ENSMUST00000189816 108 ntBASIC1.53□□□□□ -2.16
Ccbe1Q3MI99 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.53□□□□□ -2.16
Ccbe1Q3MI99 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.17
Ccbe1Q3MI99 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Ccbe1Q3MI99 Gm22544-201ENSMUST00000104349 127 ntBASIC1.52□□□□□ -2.17
Ccbe1Q3MI99 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.52□□□□□ -2.17
Ccbe1Q3MI99 Mir509-201ENSMUST00000196089 75 ntBASIC1.52□□□□□ -2.17
Ccbe1Q3MI99 Gm24406-201ENSMUST00000083026 128 ntBASIC1.52□□□□□ -2.17
Ccbe1Q3MI99 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Ccbe1Q3MI99 Mir1899-201ENSMUST00000122798 96 ntBASIC1.51□□□□□ -2.17
Ccbe1Q3MI99 Gm22556-201ENSMUST00000157803 100 ntBASIC1.51□□□□□ -2.17
Ccbe1Q3MI99 Gm24331-201ENSMUST00000175099 67 ntBASIC1.51□□□□□ -2.17
Ccbe1Q3MI99 Gm23801-201ENSMUST00000175561 67 ntBASIC1.51□□□□□ -2.17
Ccbe1Q3MI99 Gm24485-201ENSMUST00000178283 67 ntBASIC1.51□□□□□ -2.17
Ccbe1Q3MI99 Gm43927-201ENSMUST00000204599 117 ntBASIC1.51□□□□□ -2.17
Ccbe1Q3MI99 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
Ccbe1Q3MI99 Gm24701-201ENSMUST00000101946 105 ntBASIC1.5□□□□□ -2.17
Ccbe1Q3MI99 Gm23477-201ENSMUST00000158882 128 ntBASIC1.5□□□□□ -2.17
Ccbe1Q3MI99 Mir6901-201ENSMUST00000185062 62 ntBASIC1.5□□□□□ -2.17
Ccbe1Q3MI99 Gm28767-201ENSMUST00000188601 114 ntBASIC1.5□□□□□ -2.17
Ccbe1Q3MI99 Gm38295-201ENSMUST00000191951 151 ntBASIC1.5□□□□□ -2.17
Ccbe1Q3MI99 Gm22723-201ENSMUST00000083820 129 ntBASIC1.5□□□□□ -2.17
Ccbe1Q3MI99 Gm24221-201ENSMUST00000158833 313 ntBASIC1.49□□□□□ -2.17
Ccbe1Q3MI99 Gm22413-201ENSMUST00000175465 85 ntBASIC1.49□□□□□ -2.17
Ccbe1Q3MI99 Gm24638-201ENSMUST00000179807 132 ntBASIC1.49□□□□□ -2.17
Ccbe1Q3MI99 Mir6352-201ENSMUST00000184495 116 ntBASIC1.49□□□□□ -2.17
Ccbe1Q3MI99 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
Ccbe1Q3MI99 Mup-ps5-201ENSMUST00000118667 99 ntBASIC1.48□□□□□ -2.17
Ccbe1Q3MI99 Gm25619-201ENSMUST00000122621 104 ntBASIC1.48□□□□□ -2.17
Ccbe1Q3MI99 Gm23856-201ENSMUST00000158380 99 ntBASIC1.48□□□□□ -2.17
Ccbe1Q3MI99 Gm22663-201ENSMUST00000158721 102 ntBASIC1.48□□□□□ -2.17
Ccbe1Q3MI99 Gm26359-201ENSMUST00000158873 101 ntBASIC1.48□□□□□ -2.17
Ccbe1Q3MI99 Mir7679-201ENSMUST00000183379 63 ntBASIC1.48□□□□□ -2.17
Ccbe1Q3MI99 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.48□□□□□ -2.17
Ccbe1Q3MI99 Gm25756-201ENSMUST00000103990 136 ntBASIC1.47□□□□□ -2.17
Ccbe1Q3MI99 Gm23661-201ENSMUST00000122630 87 ntBASIC1.47□□□□□ -2.17
Ccbe1Q3MI99 Gm24648-201ENSMUST00000157111 132 ntBASIC1.47□□□□□ -2.17
Ccbe1Q3MI99 Gm24226-201ENSMUST00000158826 97 ntBASIC1.47□□□□□ -2.17
Ccbe1Q3MI99 Gm24174-201ENSMUST00000158933 111 ntBASIC1.47□□□□□ -2.17
Ccbe1Q3MI99 Gm25300-201ENSMUST00000175284 84 ntBASIC1.47□□□□□ -2.17
Ccbe1Q3MI99 Mir5104-201ENSMUST00000175319 94 ntBASIC1.47□□□□□ -2.17
Ccbe1Q3MI99 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC1.47□□□□□ -2.17
Ccbe1Q3MI99 Gm44490-201ENSMUST00000198566 127 ntBASIC1.47□□□□□ -2.17
Ccbe1Q3MI99 Mirlet7a-1-201ENSMUST00000083487 94 ntBASIC1.47□□□□□ -2.17
Ccbe1Q3MI99 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Ccbe1Q3MI99 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.47□□□□□ -2.17
Ccbe1Q3MI99 Gm25609-201ENSMUST00000104019 104 ntBASIC1.46□□□□□ -2.18
Ccbe1Q3MI99 Gm25496-201ENSMUST00000104430 120 ntBASIC1.46□□□□□ -2.18
Ccbe1Q3MI99 Gm26038-201ENSMUST00000158151 106 ntBASIC1.46□□□□□ -2.18
Ccbe1Q3MI99 Gm26029-201ENSMUST00000158659 132 ntBASIC1.46□□□□□ -2.18
Ccbe1Q3MI99 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC1.46□□□□□ -2.18
Ccbe1Q3MI99 Gm23267-201ENSMUST00000178490 132 ntBASIC1.46□□□□□ -2.18
Ccbe1Q3MI99 Gm44962-201ENSMUST00000206460 279 ntBASIC1.46□□□□□ -2.18
Ccbe1Q3MI99 AC160976.1-201ENSMUST00000215092 148 ntBASIC1.46□□□□□ -2.18
Ccbe1Q3MI99 Gm22753-201ENSMUST00000083657 107 ntBASIC1.46□□□□□ -2.18
Ccbe1Q3MI99 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.46□□□□□ -2.18
Ccbe1Q3MI99 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
Ccbe1Q3MI99 Gm25832-201ENSMUST00000104140 130 ntBASIC1.45□□□□□ -2.18
Ccbe1Q3MI99 Gm11857-201ENSMUST00000119817 324 ntBASIC1.45□□□□□ -2.18
Ccbe1Q3MI99 Gm25622-201ENSMUST00000157217 104 ntBASIC1.45□□□□□ -2.18
Ccbe1Q3MI99 Traj60-201ENSMUST00000167781 54 ntBASIC1.45□□□□□ -2.18
Ccbe1Q3MI99 Snord60-201ENSMUST00000082834 78 ntBASIC1.45□□□□□ -2.18
Ccbe1Q3MI99 Gm25629-201ENSMUST00000084001 107 ntBASIC1.45□□□□□ -2.18
Ccbe1Q3MI99 Mir301b-201ENSMUST00000102333 97 ntBASIC1.44□□□□□ -2.18
Ccbe1Q3MI99 Gm23881-201ENSMUST00000116872 66 ntBASIC1.44□□□□□ -2.18
Ccbe1Q3MI99 Gm12469-201ENSMUST00000117623 207 ntBASIC1.44□□□□□ -2.18
Ccbe1Q3MI99 Gm22403-201ENSMUST00000174919 84 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 241.5 ms