Protein–RNA interactions for Protein: P70362

Ufd1, Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

Predictions only

Length 307 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1P70362 Gm23654-201ENSMUST00000116758 126 ntBASIC-0.26□□□□□ -2.45
Ufd1P70362 Gm24835-201ENSMUST00000116777 111 ntBASIC-0.26□□□□□ -2.45
Ufd1P70362 Gm23504-201ENSMUST00000158988 95 ntBASIC-0.26□□□□□ -2.45
Ufd1P70362 Mir5124a-201ENSMUST00000175528 72 ntBASIC-0.26□□□□□ -2.45
Ufd1P70362 Gm23749-201ENSMUST00000104223 131 ntBASIC-0.27□□□□□ -2.45
Ufd1P70362 Gm26011-201ENSMUST00000104410 104 ntBASIC-0.27□□□□□ -2.45
Ufd1P70362 n-R5s39-201ENSMUST00000122613 108 ntBASIC-0.27□□□□□ -2.45
Ufd1P70362 Mir1898-201ENSMUST00000122643 83 ntBASIC-0.27□□□□□ -2.45
Ufd1P70362 Gm22699-201ENSMUST00000175376 105 ntBASIC-0.27□□□□□ -2.45
Ufd1P70362 Gm22048-201ENSMUST00000104721 89 ntBASIC-0.28□□□□□ -2.45
Ufd1P70362 Gm12013-201ENSMUST00000121971 155 ntBASIC-0.28□□□□□ -2.45
Ufd1P70362 Gm24246-201ENSMUST00000157315 132 ntBASIC-0.28□□□□□ -2.45
Ufd1P70362 mt-Td-201ENSMUST00000082404 70 ntBASIC-0.28□□□□□ -2.45
Ufd1P70362 Gm24524-201ENSMUST00000082925 170 ntBASIC-0.28□□□□□ -2.45
Ufd1P70362 Gm24374-201ENSMUST00000104394 106 ntBASIC-0.29□□□□□ -2.46
Ufd1P70362 Gm22337-201ENSMUST00000157721 132 ntBASIC-0.29□□□□□ -2.46
Ufd1P70362 Gm23260-201ENSMUST00000158317 172 ntBASIC-0.29□□□□□ -2.46
Ufd1P70362 Gm25716-201ENSMUST00000158628 104 ntBASIC-0.29□□□□□ -2.46
Ufd1P70362 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC-0.29□□□□□ -2.46
Ufd1P70362 Gm27694-201ENSMUST00000184740 86 ntBASIC-0.29□□□□□ -2.46
Ufd1P70362 AC161426.1-201ENSMUST00000214137 286 ntBASIC-0.29□□□□□ -2.46
Ufd1P70362 Gm25060-201ENSMUST00000157374 130 ntBASIC-0.3□□□□□ -2.46
Ufd1P70362 Gm24718-201ENSMUST00000157521 136 ntBASIC-0.3□□□□□ -2.46
Ufd1P70362 Gm26395-201ENSMUST00000104094 132 ntBASIC-0.31□□□□□ -2.46
Ufd1P70362 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC-0.31□□□□□ -2.46
Ufd1P70362 Gm25599-201ENSMUST00000157816 103 ntBASIC-0.31□□□□□ -2.46
Ufd1P70362 Gm25366-201ENSMUST00000158845 124 ntBASIC-0.31□□□□□ -2.46
Ufd1P70362 Gm23159-201ENSMUST00000175088 77 ntBASIC-0.31□□□□□ -2.46
Ufd1P70362 Gm6607-201ENSMUST00000215035 328 ntBASIC-0.31□□□□□ -2.46
Ufd1P70362 Gm24461-201ENSMUST00000082735 103 ntBASIC-0.31□□□□□ -2.46
Ufd1P70362 Gm23012-201ENSMUST00000104149 83 ntBASIC-0.32□□□□□ -2.46
Ufd1P70362 Gm26091-201ENSMUST00000122704 82 ntBASIC-0.32□□□□□ -2.46
Ufd1P70362 Gm17528-201ENSMUST00000171026 239 ntBASIC-0.32□□□□□ -2.46
Ufd1P70362 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC-0.32□□□□□ -2.46
Ufd1P70362 Gm38295-201ENSMUST00000191951 151 ntBASIC-0.32□□□□□ -2.46
Ufd1P70362 Gm25899-201ENSMUST00000082672 141 ntBASIC-0.32□□□□□ -2.46
Ufd1P70362 Gm22451-201ENSMUST00000122803 151 ntBASIC-0.33□□□□□ -2.46
Ufd1P70362 Gm24467-201ENSMUST00000157887 126 ntBASIC-0.33□□□□□ -2.46
Ufd1P70362 Gm26210-201ENSMUST00000158680 91 ntBASIC-0.33□□□□□ -2.46
Ufd1P70362 Gm37746-201ENSMUST00000193249 198 ntBASIC-0.33□□□□□ -2.46
Ufd1P70362 Gm24457-201ENSMUST00000083196 105 ntBASIC-0.33□□□□□ -2.46
Ufd1P70362 Mir466h-201ENSMUST00000104748 81 ntBASIC-0.34□□□□□ -2.46
Ufd1P70362 Gm24587-201ENSMUST00000116697 89 ntBASIC-0.34□□□□□ -2.46
Ufd1P70362 Gm22607-201ENSMUST00000158291 105 ntBASIC-0.34□□□□□ -2.46
Ufd1P70362 Gm26007-201ENSMUST00000158798 120 ntBASIC-0.34□□□□□ -2.46
Ufd1P70362 Gm43907-201ENSMUST00000203128 117 ntBASIC-0.34□□□□□ -2.46
Ufd1P70362 Mir363-201ENSMUST00000093598 75 ntBASIC-0.34□□□□□ -2.46
Ufd1P70362 Mir487b-201ENSMUST00000102265 82 ntBASIC-0.35□□□□□ -2.47
Ufd1P70362 Gm23990-201ENSMUST00000117031 117 ntBASIC-0.35□□□□□ -2.47
Ufd1P70362 Gm22838-201ENSMUST00000158437 99 ntBASIC-0.35□□□□□ -2.47
Ufd1P70362 Gm24793-201ENSMUST00000104289 132 ntBASIC-0.36□□□□□ -2.47
Ufd1P70362 Gm25315-201ENSMUST00000116823 121 ntBASIC-0.36□□□□□ -2.47
Ufd1P70362 Gm25680-201ENSMUST00000116917 126 ntBASIC-0.36□□□□□ -2.47
Ufd1P70362 Gm22635-201ENSMUST00000116962 126 ntBASIC-0.36□□□□□ -2.47
Ufd1P70362 Gm26133-201ENSMUST00000157363 100 ntBASIC-0.36□□□□□ -2.47
Ufd1P70362 Gm23900-201ENSMUST00000157569 108 ntBASIC-0.36□□□□□ -2.47
Ufd1P70362 Gm22966-201ENSMUST00000157957 129 ntBASIC-0.36□□□□□ -2.47
Ufd1P70362 Mir669j-201ENSMUST00000179023 121 ntBASIC-0.36□□□□□ -2.47
Ufd1P70362 Gm37750-201ENSMUST00000193563 129 ntBASIC-0.36□□□□□ -2.47
Ufd1P70362 Ighv15-1-201ENSMUST00000194450 276 ntBASIC-0.36□□□□□ -2.47
Ufd1P70362 AL845349.1-201ENSMUST00000213794 78 ntBASIC-0.36□□□□□ -2.47
Ufd1P70362 Mir802-201ENSMUST00000103258 97 ntBASIC-0.37□□□□□ -2.47
Ufd1P70362 Gm25497-201ENSMUST00000104425 132 ntBASIC-0.37□□□□□ -2.47
Ufd1P70362 Gm14837-201ENSMUST00000119688 206 ntBASIC-0.37□□□□□ -2.47
Ufd1P70362 Gm23314-201ENSMUST00000157218 107 ntBASIC-0.37□□□□□ -2.47
Ufd1P70362 Gm26084-201ENSMUST00000157903 104 ntBASIC-0.37□□□□□ -2.47
Ufd1P70362 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC-0.37□□□□□ -2.47
Ufd1P70362 Gm18502-201ENSMUST00000218679 199 ntBASIC-0.37□□□□□ -2.47
Ufd1P70362 AC125190.3-201ENSMUST00000223224 121 ntBASIC-0.37□□□□□ -2.47
Ufd1P70362 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC-0.38□□□□□ -2.47
Ufd1P70362 Gm26421-201ENSMUST00000104279 132 ntBASIC-0.38□□□□□ -2.47
Ufd1P70362 Gm25565-201ENSMUST00000104605 105 ntBASIC-0.38□□□□□ -2.47
Ufd1P70362 Gm25338-201ENSMUST00000116849 120 ntBASIC-0.38□□□□□ -2.47
Ufd1P70362 Snord2-201ENSMUST00000157899 69 ntBASIC-0.38□□□□□ -2.47
Ufd1P70362 Gm44375-201ENSMUST00000196657 150 ntBASIC-0.38□□□□□ -2.47
Ufd1P70362 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC-0.38□□□□□ -2.47
Ufd1P70362 mt-Ts2-201ENSMUST00000082416 59 ntBASIC-0.38□□□□□ -2.47
Ufd1P70362 Gm23423-201ENSMUST00000082782 106 ntBASIC-0.38□□□□□ -2.47
Ufd1P70362 Gm26207-201ENSMUST00000082909 104 ntBASIC-0.38□□□□□ -2.47
Ufd1P70362 Gm23690-201ENSMUST00000083036 94 ntBASIC-0.38□□□□□ -2.47
Ufd1P70362 Gm24648-201ENSMUST00000157111 132 ntBASIC-0.39□□□□□ -2.47
Ufd1P70362 Gm25367-201ENSMUST00000158846 106 ntBASIC-0.39□□□□□ -2.47
Ufd1P70362 Gm23918-201ENSMUST00000175253 106 ntBASIC-0.39□□□□□ -2.47
Ufd1P70362 AC126939.1-201ENSMUST00000224943 226 ntBASIC-0.39□□□□□ -2.47
Ufd1P70362 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC-0.4□□□□□ -2.47
Ufd1P70362 Gm25091-201ENSMUST00000103997 71 ntBASIC-0.4□□□□□ -2.47
Ufd1P70362 Gm14947-201ENSMUST00000133704 303 ntBASIC-0.4□□□□□ -2.47
Ufd1P70362 Gm25149-201ENSMUST00000157119 82 ntBASIC-0.4□□□□□ -2.47
Ufd1P70362 Gm24913-201ENSMUST00000157286 107 ntBASIC-0.4□□□□□ -2.47
Ufd1P70362 Gm22089-201ENSMUST00000158336 102 ntBASIC-0.4□□□□□ -2.47
Ufd1P70362 Mir6915-201ENSMUST00000198839 69 ntBASIC-0.4□□□□□ -2.47
Ufd1P70362 Gm44853-201ENSMUST00000209070 250 ntBASIC-0.4□□□□□ -2.47
Ufd1P70362 Snord47-201ENSMUST00000083034 77 ntBASIC-0.4□□□□□ -2.47
Ufd1P70362 Mir141-201ENSMUST00000083540 72 ntBASIC-0.4□□□□□ -2.47
Ufd1P70362 Gm24887-201ENSMUST00000104386 108 ntBASIC-0.41□□□□□ -2.48
Ufd1P70362 Gm24399-201ENSMUST00000157869 74 ntBASIC-0.41□□□□□ -2.48
Ufd1P70362 Gm25772-201ENSMUST00000158574 56 ntBASIC-0.41□□□□□ -2.48
Ufd1P70362 Gm22324-201ENSMUST00000158903 114 ntBASIC-0.41□□□□□ -2.48
Ufd1P70362 Gm25328-201ENSMUST00000175013 107 ntBASIC-0.41□□□□□ -2.48
Ufd1P70362 Gm23291-201ENSMUST00000175611 78 ntBASIC-0.41□□□□□ -2.48
Retrieved 100 of 76,532 protein–RNA pairs in 134.9 ms