Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Gm18433-201ENSMUST00000192747 197 ntBASIC1.74□□□□□ -2.13
Nub1P54729 Mir29a-201ENSMUST00000083676 88 ntBASIC1.74□□□□□ -2.13
Nub1P54729 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Nub1P54729 Snord13-201ENSMUST00000157627 104 ntBASIC1.73□□□□□ -2.13
Nub1P54729 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.73□□□□□ -2.13
Nub1P54729 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC1.73□□□□□ -2.13
Nub1P54729 Mir148b-201ENSMUST00000083626 97 ntBASIC1.73□□□□□ -2.13
Nub1P54729 Gm25629-201ENSMUST00000084001 107 ntBASIC1.73□□□□□ -2.13
Nub1P54729 Mir709-201ENSMUST00000102190 88 ntBASIC1.72□□□□□ -2.13
Nub1P54729 Gm23130-201ENSMUST00000104252 74 ntBASIC1.72□□□□□ -2.13
Nub1P54729 Gm24588-201ENSMUST00000116696 83 ntBASIC1.72□□□□□ -2.13
Nub1P54729 Gm22205-201ENSMUST00000122655 71 ntBASIC1.72□□□□□ -2.13
Nub1P54729 Mir653-201ENSMUST00000102402 85 ntBASIC1.71□□□□□ -2.14
Nub1P54729 Gm24593-201ENSMUST00000122507 106 ntBASIC1.71□□□□□ -2.14
Nub1P54729 Gm26478-201ENSMUST00000122611 133 ntBASIC1.71□□□□□ -2.14
Nub1P54729 Gm24076-201ENSMUST00000158179 94 ntBASIC1.71□□□□□ -2.14
Nub1P54729 Gm25600-201ENSMUST00000158357 106 ntBASIC1.71□□□□□ -2.14
Nub1P54729 Gm24174-201ENSMUST00000158933 111 ntBASIC1.71□□□□□ -2.14
Nub1P54729 Gm24638-201ENSMUST00000179807 132 ntBASIC1.71□□□□□ -2.14
Nub1P54729 Mir6351-201ENSMUST00000183826 99 ntBASIC1.71□□□□□ -2.14
Nub1P54729 Gm38295-201ENSMUST00000191951 151 ntBASIC1.71□□□□□ -2.14
Nub1P54729 Gm44469-201ENSMUST00000198558 79 ntBASIC1.71□□□□□ -2.14
Nub1P54729 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.71□□□□□ -2.14
Nub1P54729 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
Nub1P54729 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.7□□□□□ -2.14
Nub1P54729 Gm24009-201ENSMUST00000157734 93 ntBASIC1.7□□□□□ -2.14
Nub1P54729 Gm22732-201ENSMUST00000158093 121 ntBASIC1.7□□□□□ -2.14
Nub1P54729 Gm25693-201ENSMUST00000175443 85 ntBASIC1.7□□□□□ -2.14
Nub1P54729 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.7□□□□□ -2.14
Nub1P54729 AC154506.4-201ENSMUST00000224898 3416 ntBASIC1.7□□□□□ -2.14
Nub1P54729 Gm24648-201ENSMUST00000157111 132 ntBASIC1.69□□□□□ -2.14
Nub1P54729 Gm22559-201ENSMUST00000157329 134 ntBASIC1.69□□□□□ -2.14
Nub1P54729 Gm10548-202ENSMUST00000165672 272 ntBASIC1.69□□□□□ -2.14
Nub1P54729 Snora26-201ENSMUST00000175614 121 ntBASIC1.69□□□□□ -2.14
Nub1P54729 Gm27248-201ENSMUST00000184004 166 ntBASIC1.69□□□□□ -2.14
Nub1P54729 Gm36956-201ENSMUST00000193830 214 ntBASIC1.69□□□□□ -2.14
Nub1P54729 Gm44483-201ENSMUST00000197203 97 ntBASIC1.69□□□□□ -2.14
Nub1P54729 AC168062.3-201ENSMUST00000227025 165 ntBASIC1.69□□□□□ -2.14
Nub1P54729 Mir324-201ENSMUST00000083600 89 ntBASIC1.69□□□□□ -2.14
Nub1P54729 Gm15115-201ENSMUST00000121145 264 ntBASIC1.68□□□□□ -2.14
Nub1P54729 Gm24476-201ENSMUST00000157437 131 ntBASIC1.68□□□□□ -2.14
Nub1P54729 Gm27711-201ENSMUST00000183802 118 ntBASIC1.68□□□□□ -2.14
Nub1P54729 Gm26224-201ENSMUST00000082506 80 ntBASIC1.68□□□□□ -2.14
Nub1P54729 Gm25644-201ENSMUST00000083209 107 ntBASIC1.68□□□□□ -2.14
Nub1P54729 Mir320-201ENSMUST00000083594 82 ntBASIC1.68□□□□□ -2.14
Nub1P54729 Gm24290-201ENSMUST00000157634 96 ntBASIC1.67□□□□□ -2.14
Nub1P54729 Gm43944-201ENSMUST00000205220 120 ntBASIC1.67□□□□□ -2.14
Nub1P54729 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.67□□□□□ -2.14
Nub1P54729 Gm25696-201ENSMUST00000082900 105 ntBASIC1.67□□□□□ -2.14
Nub1P54729 Gm24406-201ENSMUST00000083026 128 ntBASIC1.67□□□□□ -2.14
Nub1P54729 Gm24162-201ENSMUST00000093665 102 ntBASIC1.67□□□□□ -2.14
Nub1P54729 Gm26158-201ENSMUST00000158973 119 ntBASIC1.66□□□□□ -2.14
Nub1P54729 Mir6905-201ENSMUST00000184228 70 ntBASIC1.66□□□□□ -2.14
Nub1P54729 AC157602.1-201ENSMUST00000197446 105 ntBASIC1.66□□□□□ -2.14
Nub1P54729 Mir3087-201ENSMUST00000199405 56 ntBASIC1.66□□□□□ -2.14
Nub1P54729 Gm25974-201ENSMUST00000158701 94 ntBASIC1.65□□□□□ -2.15
Nub1P54729 Gm25495-201ENSMUST00000104431 131 ntBASIC1.64□□□□□ -2.15
Nub1P54729 Traj60-201ENSMUST00000167781 54 ntBASIC1.64□□□□□ -2.15
Nub1P54729 Mirlet7a-1-201ENSMUST00000083487 94 ntBASIC1.64□□□□□ -2.15
Nub1P54729 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC1.64□□□□□ -2.15
Nub1P54729 Mir1950-201ENSMUST00000158526 74 ntBASIC1.63□□□□□ -2.15
Nub1P54729 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.63□□□□□ -2.15
Nub1P54729 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.63□□□□□ -2.15
Nub1P54729 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
Nub1P54729 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
Nub1P54729 Gm25542-201ENSMUST00000116889 94 ntBASIC1.62□□□□□ -2.15
Nub1P54729 Mup-ps5-201ENSMUST00000118667 99 ntBASIC1.62□□□□□ -2.15
Nub1P54729 Gm24129-201ENSMUST00000158537 97 ntBASIC1.62□□□□□ -2.15
Nub1P54729 Mir1933-201ENSMUST00000158930 88 ntBASIC1.62□□□□□ -2.15
Nub1P54729 Mir509-201ENSMUST00000196089 75 ntBASIC1.62□□□□□ -2.15
Nub1P54729 Gm25854-201ENSMUST00000082792 72 ntBASIC1.62□□□□□ -2.15
Nub1P54729 Gm25832-201ENSMUST00000104140 130 ntBASIC1.61□□□□□ -2.15
Nub1P54729 Gm23558-201ENSMUST00000157823 80 ntBASIC1.61□□□□□ -2.15
Nub1P54729 Gm26089-201ENSMUST00000157898 107 ntBASIC1.61□□□□□ -2.15
Nub1P54729 Gm27297-201ENSMUST00000183395 105 ntBASIC1.61□□□□□ -2.15
Nub1P54729 Gm27420-201ENSMUST00000183823 79 ntBASIC1.61□□□□□ -2.15
Nub1P54729 Gm27993-201ENSMUST00000184362 85 ntBASIC1.61□□□□□ -2.15
Nub1P54729 Gm25820-201ENSMUST00000198589 127 ntBASIC1.61□□□□□ -2.15
Nub1P54729 Gm24547-201ENSMUST00000158649 149 ntBASIC1.6□□□□□ -2.15
Nub1P54729 Gm44962-201ENSMUST00000206460 279 ntBASIC1.6□□□□□ -2.15
Nub1P54729 Gm25759-201ENSMUST00000103988 129 ntBASIC1.59□□□□□ -2.15
Nub1P54729 Gm22030-201ENSMUST00000116942 63 ntBASIC1.59□□□□□ -2.15
Nub1P54729 Gm23339-201ENSMUST00000158962 139 ntBASIC1.59□□□□□ -2.15
Nub1P54729 Gm28435-201ENSMUST00000185496 108 ntBASIC1.59□□□□□ -2.15
Nub1P54729 Gm29047-201ENSMUST00000189816 108 ntBASIC1.59□□□□□ -2.15
Nub1P54729 Gm26202-201ENSMUST00000082910 65 ntBASIC1.59□□□□□ -2.15
Nub1P54729 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Nub1P54729 Gm11857-201ENSMUST00000119817 324 ntBASIC1.58□□□□□ -2.16
Nub1P54729 Gm24073-201ENSMUST00000158177 106 ntBASIC1.58□□□□□ -2.16
Nub1P54729 Gm23267-201ENSMUST00000178490 132 ntBASIC1.58□□□□□ -2.16
Nub1P54729 Gm25322-201ENSMUST00000122556 104 ntBASIC1.57□□□□□ -2.16
Nub1P54729 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.57□□□□□ -2.16
Nub1P54729 Gm22466-201ENSMUST00000175278 69 ntBASIC1.57□□□□□ -2.16
Nub1P54729 Gm25740-201ENSMUST00000180247 107 ntBASIC1.57□□□□□ -2.16
Nub1P54729 Gm27493-201ENSMUST00000184128 78 ntBASIC1.57□□□□□ -2.16
Nub1P54729 AC116319.1-201ENSMUST00000227765 222 ntBASIC1.57□□□□□ -2.16
Nub1P54729 Gm23301-201ENSMUST00000082713 65 ntBASIC1.57□□□□□ -2.16
Nub1P54729 Gm24988-201ENSMUST00000104460 121 ntBASIC1.56□□□□□ -2.16
Nub1P54729 Mir1187-201ENSMUST00000116936 122 ntBASIC1.56□□□□□ -2.16
Nub1P54729 Gm25831-201ENSMUST00000158924 163 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 158.3 ms