Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Gm26280-201ENSMUST00000157096 101 ntBASIC2.11□□□□□ -2.07
Msx1P13297 Gm26089-201ENSMUST00000157898 107 ntBASIC2.11□□□□□ -2.07
Msx1P13297 Mir7225-201ENSMUST00000184178 54 ntBASIC2.11□□□□□ -2.07
Msx1P13297 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Msx1P13297 Mir3069-201ENSMUST00000198802 65 ntBASIC2.11□□□□□ -2.07
Msx1P13297 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC2.11□□□□□ -2.07
Msx1P13297 Gm24661-201ENSMUST00000083205 104 ntBASIC2.11□□□□□ -2.07
Msx1P13297 Mir126a-201ENSMUST00000083606 73 ntBASIC2.11□□□□□ -2.07
Msx1P13297 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.11□□□□□ -2.07
Msx1P13297 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.11□□□□□ -2.07
Msx1P13297 Gm23170-201ENSMUST00000157158 106 ntBASIC2.1□□□□□ -2.07
Msx1P13297 Gm24476-201ENSMUST00000157437 131 ntBASIC2.1□□□□□ -2.07
Msx1P13297 Gm22801-201ENSMUST00000175624 84 ntBASIC2.1□□□□□ -2.07
Msx1P13297 Gm36956-201ENSMUST00000193830 214 ntBASIC2.1□□□□□ -2.07
Msx1P13297 Gm37579-201ENSMUST00000194291 142 ntBASIC2.1□□□□□ -2.07
Msx1P13297 Mir468-201ENSMUST00000197332 78 ntBASIC2.1□□□□□ -2.07
Msx1P13297 Gm24044-201ENSMUST00000083107 156 ntBASIC2.1□□□□□ -2.07
Msx1P13297 Snord1a-201ENSMUST00000083160 74 ntBASIC2.1□□□□□ -2.07
Msx1P13297 Gm24134-201ENSMUST00000083361 71 ntBASIC2.1□□□□□ -2.07
Msx1P13297 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC2.1□□□□□ -2.07
Msx1P13297 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
Msx1P13297 Gm22788-201ENSMUST00000157876 61 ntBASIC2.09□□□□□ -2.07
Msx1P13297 Gm27898-201ENSMUST00000183987 80 ntBASIC2.09□□□□□ -2.07
Msx1P13297 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Msx1P13297 Mir216b-201ENSMUST00000102363 86 ntBASIC2.08□□□□□ -2.08
Msx1P13297 Gm25110-201ENSMUST00000116684 121 ntBASIC2.08□□□□□ -2.08
Msx1P13297 Gm25775-201ENSMUST00000116716 121 ntBASIC2.08□□□□□ -2.08
Msx1P13297 Gm24795-201ENSMUST00000116737 121 ntBASIC2.08□□□□□ -2.08
Msx1P13297 Gm25171-201ENSMUST00000116926 121 ntBASIC2.08□□□□□ -2.08
Msx1P13297 n-R5s159-201ENSMUST00000122681 120 ntBASIC2.08□□□□□ -2.08
Msx1P13297 Gm24226-201ENSMUST00000158826 97 ntBASIC2.08□□□□□ -2.08
Msx1P13297 Gm25366-201ENSMUST00000158845 124 ntBASIC2.08□□□□□ -2.08
Msx1P13297 Gm22862-201ENSMUST00000178593 121 ntBASIC2.08□□□□□ -2.08
Msx1P13297 Gm37557-201ENSMUST00000191640 139 ntBASIC2.08□□□□□ -2.08
Msx1P13297 AC157278.1-201ENSMUST00000221621 148 ntBASIC2.08□□□□□ -2.08
Msx1P13297 Gm25658-201ENSMUST00000158472 128 ntBASIC2.07□□□□□ -2.08
Msx1P13297 Gm24229-201ENSMUST00000158830 118 ntBASIC2.07□□□□□ -2.08
Msx1P13297 Gm25300-201ENSMUST00000175284 84 ntBASIC2.07□□□□□ -2.08
Msx1P13297 Gm25693-201ENSMUST00000175443 85 ntBASIC2.07□□□□□ -2.08
Msx1P13297 Gm44488-201ENSMUST00000199467 119 ntBASIC2.07□□□□□ -2.08
Msx1P13297 Gm43907-201ENSMUST00000203128 117 ntBASIC2.07□□□□□ -2.08
Msx1P13297 Gm45654-201ENSMUST00000210980 123 ntBASIC2.07□□□□□ -2.08
Msx1P13297 Snord45b-201ENSMUST00000082797 71 ntBASIC2.07□□□□□ -2.08
Msx1P13297 Snora69-201ENSMUST00000083708 131 ntBASIC2.07□□□□□ -2.08
Msx1P13297 Mir297-1-201ENSMUST00000103800 76 ntBASIC2.06□□□□□ -2.08
Msx1P13297 Mir741-201ENSMUST00000103931 71 ntBASIC2.06□□□□□ -2.08
Msx1P13297 Gm24290-201ENSMUST00000157634 96 ntBASIC2.06□□□□□ -2.08
Msx1P13297 Gm22159-201ENSMUST00000158412 130 ntBASIC2.06□□□□□ -2.08
Msx1P13297 Mir7675-201ENSMUST00000184262 58 ntBASIC2.06□□□□□ -2.08
Msx1P13297 Gm27993-201ENSMUST00000184362 85 ntBASIC2.06□□□□□ -2.08
Msx1P13297 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC2.06□□□□□ -2.08
Msx1P13297 Mir494-201ENSMUST00000093632 85 ntBASIC2.06□□□□□ -2.08
Msx1P13297 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Msx1P13297 Mir709-201ENSMUST00000102190 88 ntBASIC2.05□□□□□ -2.08
Msx1P13297 Mir758-201ENSMUST00000103260 81 ntBASIC2.05□□□□□ -2.08
Msx1P13297 Gm24983-201ENSMUST00000104457 69 ntBASIC2.05□□□□□ -2.08
Msx1P13297 Gm22030-201ENSMUST00000116942 63 ntBASIC2.05□□□□□ -2.08
Msx1P13297 Gm16510-201ENSMUST00000153501 249 ntBASIC2.05□□□□□ -2.08
Msx1P13297 Gm22083-201ENSMUST00000157586 102 ntBASIC2.05□□□□□ -2.08
Msx1P13297 Gm25836-201ENSMUST00000158918 123 ntBASIC2.05□□□□□ -2.08
Msx1P13297 Snora75-201ENSMUST00000082903 133 ntBASIC2.05□□□□□ -2.08
Msx1P13297 Mir7232-201ENSMUST00000197929 74 ntBASIC2.04□□□□□ -2.08
Msx1P13297 CT485608.2-201ENSMUST00000227210 291 ntBASIC2.04□□□□□ -2.08
Msx1P13297 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
Msx1P13297 Gm25663-201ENSMUST00000157698 135 ntBASIC2.03□□□□□ -2.08
Msx1P13297 Mir669n-201ENSMUST00000158636 54 ntBASIC2.03□□□□□ -2.08
Msx1P13297 Gm22406-201ENSMUST00000174923 93 ntBASIC2.03□□□□□ -2.08
Msx1P13297 Gm24154-201ENSMUST00000175261 130 ntBASIC2.03□□□□□ -2.08
Msx1P13297 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Msx1P13297 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Msx1P13297 AC116319.1-201ENSMUST00000227765 222 ntBASIC2.03□□□□□ -2.08
Msx1P13297 Gm22723-201ENSMUST00000083820 129 ntBASIC2.03□□□□□ -2.08
Msx1P13297 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Msx1P13297 Gm22100-201ENSMUST00000157926 63 ntBASIC2.02□□□□□ -2.09
Msx1P13297 Gm26038-201ENSMUST00000158151 106 ntBASIC2.02□□□□□ -2.09
Msx1P13297 Gm22093-201ENSMUST00000158980 111 ntBASIC2.02□□□□□ -2.09
Msx1P13297 Mir3087-201ENSMUST00000199405 56 ntBASIC2.02□□□□□ -2.09
Msx1P13297 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Msx1P13297 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
Msx1P13297 Gm24701-201ENSMUST00000101946 105 ntBASIC2.01□□□□□ -2.09
Msx1P13297 Gm25035-201ENSMUST00000175414 77 ntBASIC2.01□□□□□ -2.09
Msx1P13297 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Msx1P13297 Mir1961-201ENSMUST00000158643 112 ntBASIC2□□□□□ -2.09
Msx1P13297 Gm5581-201ENSMUST00000072940 2550 ntBASIC1.99□□□□□ -2.09
Msx1P13297 Gm22203-201ENSMUST00000158605 58 ntBASIC1.99□□□□□ -2.09
Msx1P13297 Gm23649-201ENSMUST00000179007 107 ntBASIC1.99□□□□□ -2.09
Msx1P13297 Gm24098-201ENSMUST00000102075 109 ntBASIC1.98□□□□□ -2.09
Msx1P13297 Gm25381-201ENSMUST00000102078 109 ntBASIC1.98□□□□□ -2.09
Msx1P13297 Mir223-201ENSMUST00000102112 110 ntBASIC1.98□□□□□ -2.09
Msx1P13297 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC1.98□□□□□ -2.09
Msx1P13297 Gm23109-201ENSMUST00000116867 126 ntBASIC1.98□□□□□ -2.09
Msx1P13297 Gm22078-201ENSMUST00000157593 103 ntBASIC1.98□□□□□ -2.09
Msx1P13297 Gm23500-201ENSMUST00000157735 98 ntBASIC1.98□□□□□ -2.09
Msx1P13297 Mir876-201ENSMUST00000104659 81 ntBASIC1.97□□□□□ -2.09
Msx1P13297 Gm25183-201ENSMUST00000157752 106 ntBASIC1.97□□□□□ -2.09
Msx1P13297 Gm22556-201ENSMUST00000157803 100 ntBASIC1.97□□□□□ -2.09
Msx1P13297 Gm27549-201ENSMUST00000183508 62 ntBASIC1.97□□□□□ -2.09
Msx1P13297 Mir7217-201ENSMUST00000200304 62 ntBASIC1.97□□□□□ -2.09
Msx1P13297 Gm26922-201ENSMUST00000082687 72 ntBASIC1.97□□□□□ -2.09
Msx1P13297 Gm43885-201ENSMUST00000204928 2542 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 141.9 ms