Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Snora26-201ENSMUST00000175614 121 ntBASIC1.22□□□□□ -2.21
Col3a1P08121 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.22□□□□□ -2.21
Col3a1P08121 Gm23293-201ENSMUST00000082552 104 ntBASIC1.22□□□□□ -2.21
Col3a1P08121 Gm25696-201ENSMUST00000082900 105 ntBASIC1.22□□□□□ -2.21
Col3a1P08121 Gm23344-201ENSMUST00000083818 68 ntBASIC1.22□□□□□ -2.21
Col3a1P08121 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.22□□□□□ -2.21
Col3a1P08121 Gm22340-201ENSMUST00000157717 114 ntBASIC1.21□□□□□ -2.22
Col3a1P08121 Gm23783-201ENSMUST00000157941 102 ntBASIC1.21□□□□□ -2.22
Col3a1P08121 Mir3086-201ENSMUST00000175072 87 ntBASIC1.21□□□□□ -2.22
Col3a1P08121 Gm24674-201ENSMUST00000179194 104 ntBASIC1.21□□□□□ -2.22
Col3a1P08121 Gm27987-201ENSMUST00000184023 93 ntBASIC1.21□□□□□ -2.22
Col3a1P08121 Gm27686-201ENSMUST00000185123 91 ntBASIC1.21□□□□□ -2.22
Col3a1P08121 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC1.21□□□□□ -2.22
Col3a1P08121 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC1.21□□□□□ -2.22
Col3a1P08121 Gm20118-201ENSMUST00000187207 162 ntBASIC1.21□□□□□ -2.22
Col3a1P08121 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC1.21□□□□□ -2.22
Col3a1P08121 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC1.21□□□□□ -2.22
Col3a1P08121 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC1.21□□□□□ -2.22
Col3a1P08121 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC1.21□□□□□ -2.22
Col3a1P08121 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC1.21□□□□□ -2.22
Col3a1P08121 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC1.21□□□□□ -2.22
Col3a1P08121 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC1.21□□□□□ -2.22
Col3a1P08121 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC1.21□□□□□ -2.22
Col3a1P08121 Mir30f-201ENSMUST00000196073 92 ntBASIC1.21□□□□□ -2.22
Col3a1P08121 AC141438.3-201ENSMUST00000215632 202 ntBASIC1.21□□□□□ -2.22
Col3a1P08121 Gm25038-201ENSMUST00000082928 130 ntBASIC1.21□□□□□ -2.22
Col3a1P08121 Gm26062-201ENSMUST00000083379 107 ntBASIC1.21□□□□□ -2.22
Col3a1P08121 Mir654-201ENSMUST00000104787 84 ntBASIC1.2□□□□□ -2.22
Col3a1P08121 Gm23715-201ENSMUST00000157354 106 ntBASIC1.2□□□□□ -2.22
Col3a1P08121 Mir1949-201ENSMUST00000157434 141 ntBASIC1.2□□□□□ -2.22
Col3a1P08121 Gm25838-201ENSMUST00000158920 120 ntBASIC1.2□□□□□ -2.22
Col3a1P08121 Snora24-201ENSMUST00000174989 130 ntBASIC1.2□□□□□ -2.22
Col3a1P08121 Gm24366-201ENSMUST00000175383 86 ntBASIC1.2□□□□□ -2.22
Col3a1P08121 Gm27975-201ENSMUST00000184400 101 ntBASIC1.2□□□□□ -2.22
Col3a1P08121 Mir7079-201ENSMUST00000184697 69 ntBASIC1.2□□□□□ -2.22
Col3a1P08121 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC1.2□□□□□ -2.22
Col3a1P08121 Mir221-201ENSMUST00000083488 95 ntBASIC1.2□□□□□ -2.22
Col3a1P08121 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Col3a1P08121 Gm14884-201ENSMUST00000120456 196 ntBASIC1.19□□□□□ -2.22
Col3a1P08121 Mir6369-201ENSMUST00000183772 106 ntBASIC1.19□□□□□ -2.22
Col3a1P08121 Gm22458-201ENSMUST00000082576 107 ntBASIC1.19□□□□□ -2.22
Col3a1P08121 Gm25644-201ENSMUST00000083209 107 ntBASIC1.19□□□□□ -2.22
Col3a1P08121 Gm43885-201ENSMUST00000204928 2542 ntBASIC1.19□□□□□ -2.22
Col3a1P08121 Gm22205-201ENSMUST00000122655 71 ntBASIC1.18□□□□□ -2.22
Col3a1P08121 Gm22522-201ENSMUST00000158271 151 ntBASIC1.18□□□□□ -2.22
Col3a1P08121 Mir6419-201ENSMUST00000184784 113 ntBASIC1.18□□□□□ -2.22
Col3a1P08121 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
Col3a1P08121 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
Col3a1P08121 Gm23172-201ENSMUST00000157160 124 ntBASIC1.18□□□□□ -2.22
Col3a1P08121 Gm22539-201ENSMUST00000158167 117 ntBASIC1.18□□□□□ -2.22
Col3a1P08121 Gm22200-201ENSMUST00000158614 67 ntBASIC1.18□□□□□ -2.22
Col3a1P08121 Gm23208-201ENSMUST00000158666 127 ntBASIC1.18□□□□□ -2.22
Col3a1P08121 Gm26290-201ENSMUST00000158891 145 ntBASIC1.18□□□□□ -2.22
Col3a1P08121 Gm25899-201ENSMUST00000082672 141 ntBASIC1.18□□□□□ -2.22
Col3a1P08121 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.17□□□□□ -2.22
Col3a1P08121 Gm23126-201ENSMUST00000104260 134 ntBASIC1.17□□□□□ -2.22
Col3a1P08121 Gm14039-201ENSMUST00000118705 101 ntBASIC1.17□□□□□ -2.22
Col3a1P08121 Gm24509-201ENSMUST00000157086 101 ntBASIC1.17□□□□□ -2.22
Col3a1P08121 Gm25358-201ENSMUST00000157189 101 ntBASIC1.17□□□□□ -2.22
Col3a1P08121 Gm23761-201ENSMUST00000158347 104 ntBASIC1.17□□□□□ -2.22
Col3a1P08121 Gm25014-201ENSMUST00000158401 103 ntBASIC1.17□□□□□ -2.22
Col3a1P08121 Gm25740-201ENSMUST00000180247 107 ntBASIC1.17□□□□□ -2.22
Col3a1P08121 Mir7683-201ENSMUST00000183842 61 ntBASIC1.17□□□□□ -2.22
Col3a1P08121 Mir7241-201ENSMUST00000184532 64 ntBASIC1.17□□□□□ -2.22
Col3a1P08121 Gm24183-201ENSMUST00000122572 93 ntBASIC1.16□□□□□ -2.22
Col3a1P08121 Mir1904-201ENSMUST00000122702 80 ntBASIC1.16□□□□□ -2.22
Col3a1P08121 Gm24223-201ENSMUST00000158827 90 ntBASIC1.16□□□□□ -2.22
Col3a1P08121 Snord87-201ENSMUST00000175437 87 ntBASIC1.16□□□□□ -2.22
Col3a1P08121 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC1.16□□□□□ -2.22
Col3a1P08121 Gm28256-201ENSMUST00000188953 139 ntBASIC1.16□□□□□ -2.22
Col3a1P08121 Gm28559-201ENSMUST00000190532 139 ntBASIC1.16□□□□□ -2.22
Col3a1P08121 Gm25854-201ENSMUST00000082792 72 ntBASIC1.16□□□□□ -2.22
Col3a1P08121 Gm23528-201ENSMUST00000104571 132 ntBASIC1.15□□□□□ -2.23
Col3a1P08121 Gm25542-201ENSMUST00000116889 94 ntBASIC1.15□□□□□ -2.23
Col3a1P08121 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC1.15□□□□□ -2.23
Col3a1P08121 Gm24384-201ENSMUST00000122693 75 ntBASIC1.15□□□□□ -2.23
Col3a1P08121 Gm24575-201ENSMUST00000175502 77 ntBASIC1.15□□□□□ -2.23
Col3a1P08121 Gm25730-201ENSMUST00000178753 165 ntBASIC1.15□□□□□ -2.23
Col3a1P08121 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
Col3a1P08121 Gm23826-201ENSMUST00000157394 119 ntBASIC1.14□□□□□ -2.23
Col3a1P08121 Gm23900-201ENSMUST00000157569 108 ntBASIC1.14□□□□□ -2.23
Col3a1P08121 Gm22732-201ENSMUST00000158093 121 ntBASIC1.14□□□□□ -2.23
Col3a1P08121 Mir5104-201ENSMUST00000175319 94 ntBASIC1.14□□□□□ -2.23
Col3a1P08121 Gm25950-201ENSMUST00000175331 100 ntBASIC1.14□□□□□ -2.23
Col3a1P08121 Gm25635-201ENSMUST00000082675 131 ntBASIC1.14□□□□□ -2.23
Col3a1P08121 Scarna9-201ENSMUST00000104318 70 ntBASIC1.13□□□□□ -2.23
Col3a1P08121 Gm11333-201ENSMUST00000119479 148 ntBASIC1.13□□□□□ -2.23
Col3a1P08121 Gm26478-201ENSMUST00000122611 133 ntBASIC1.13□□□□□ -2.23
Col3a1P08121 Gm24399-201ENSMUST00000157869 74 ntBASIC1.13□□□□□ -2.23
Col3a1P08121 Gm26358-201ENSMUST00000158215 97 ntBASIC1.13□□□□□ -2.23
Col3a1P08121 Mir3057-201ENSMUST00000175040 91 ntBASIC1.13□□□□□ -2.23
Col3a1P08121 Gm24495-201ENSMUST00000178575 79 ntBASIC1.13□□□□□ -2.23
Col3a1P08121 Gm22253-201ENSMUST00000179870 79 ntBASIC1.13□□□□□ -2.23
Col3a1P08121 Gm44483-201ENSMUST00000197203 97 ntBASIC1.13□□□□□ -2.23
Col3a1P08121 Mir219b-201ENSMUST00000198317 65 ntBASIC1.13□□□□□ -2.23
Col3a1P08121 Mir5117-201ENSMUST00000083226 84 ntBASIC1.13□□□□□ -2.23
Col3a1P08121 Mir532-201ENSMUST00000093630 96 ntBASIC1.13□□□□□ -2.23
Col3a1P08121 Mir1191-201ENSMUST00000116883 120 ntBASIC1.12□□□□□ -2.23
Col3a1P08121 Gm26133-201ENSMUST00000157363 100 ntBASIC1.12□□□□□ -2.23
Col3a1P08121 Gm24401-201ENSMUST00000157868 91 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 153.1 ms