Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Gm43927-201ENSMUST00000204599 117 ntBASIC0.51□□□□□ -2.33
Best1O88870 Gm25894-201ENSMUST00000083458 75 ntBASIC0.51□□□□□ -2.33
Best1O88870 Mir802-201ENSMUST00000103258 97 ntBASIC0.5□□□□□ -2.33
Best1O88870 Gm22089-201ENSMUST00000158336 102 ntBASIC0.5□□□□□ -2.33
Best1O88870 Gm25978-201ENSMUST00000158698 90 ntBASIC0.5□□□□□ -2.33
Best1O88870 Gm22638-201ENSMUST00000179674 107 ntBASIC0.5□□□□□ -2.33
Best1O88870 Gm22302-201ENSMUST00000082657 106 ntBASIC0.5□□□□□ -2.33
Best1O88870 Mir200b-201ENSMUST00000083615 70 ntBASIC0.5□□□□□ -2.33
Best1O88870 Gm14400-201ENSMUST00000117234 2135 ntBASIC0.49□□□□□ -2.33
Best1O88870 Gm23661-201ENSMUST00000122630 87 ntBASIC0.49□□□□□ -2.33
Best1O88870 Gm23605-201ENSMUST00000157255 127 ntBASIC0.49□□□□□ -2.33
Best1O88870 Gm26133-201ENSMUST00000157363 100 ntBASIC0.49□□□□□ -2.33
Best1O88870 Gm24009-201ENSMUST00000157734 93 ntBASIC0.49□□□□□ -2.33
Best1O88870 Gm22983-201ENSMUST00000158308 104 ntBASIC0.49□□□□□ -2.33
Best1O88870 Gm24258-201ENSMUST00000083739 133 ntBASIC0.49□□□□□ -2.33
Best1O88870 Gm25680-201ENSMUST00000116917 126 ntBASIC0.48□□□□□ -2.33
Best1O88870 Gm22635-201ENSMUST00000116962 126 ntBASIC0.48□□□□□ -2.33
Best1O88870 Gm44457-201ENSMUST00000198109 76 ntBASIC0.48□□□□□ -2.33
Best1O88870 Mir1a-1-201ENSMUST00000093635 77 ntBASIC0.48□□□□□ -2.33
Best1O88870 Mir670-201ENSMUST00000102380 100 ntBASIC0.47□□□□□ -2.33
Best1O88870 Gm23654-201ENSMUST00000116758 126 ntBASIC0.47□□□□□ -2.33
Best1O88870 Gm23900-201ENSMUST00000157569 108 ntBASIC0.47□□□□□ -2.33
Best1O88870 Gm22788-201ENSMUST00000157876 61 ntBASIC0.47□□□□□ -2.33
Best1O88870 Gm22239-201ENSMUST00000175220 103 ntBASIC0.47□□□□□ -2.33
Best1O88870 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.46□□□□□ -2.34
Best1O88870 Gm26285-201ENSMUST00000177923 107 ntBASIC0.46□□□□□ -2.34
Best1O88870 Gm23622-201ENSMUST00000082460 107 ntBASIC0.46□□□□□ -2.34
Best1O88870 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
Best1O88870 Gm22303-201ENSMUST00000082686 122 ntBASIC0.45□□□□□ -2.34
Best1O88870 Gm24208-201ENSMUST00000082783 135 ntBASIC0.45□□□□□ -2.34
Best1O88870 Gm23482-201ENSMUST00000104172 122 ntBASIC0.44□□□□□ -2.34
Best1O88870 Gm23321-201ENSMUST00000104465 126 ntBASIC0.44□□□□□ -2.34
Best1O88870 Gm25618-201ENSMUST00000179484 107 ntBASIC0.44□□□□□ -2.34
Best1O88870 Gm25056-201ENSMUST00000157372 62 ntBASIC0.43□□□□□ -2.34
Best1O88870 Gm23672-201ENSMUST00000157471 107 ntBASIC0.43□□□□□ -2.34
Best1O88870 Mir3105-201ENSMUST00000175480 85 ntBASIC0.43□□□□□ -2.34
Best1O88870 Mir7065-201ENSMUST00000185110 61 ntBASIC0.43□□□□□ -2.34
Best1O88870 Mir216b-201ENSMUST00000102363 86 ntBASIC0.42□□□□□ -2.34
Best1O88870 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC0.42□□□□□ -2.34
Best1O88870 Gm23708-201ENSMUST00000104367 123 ntBASIC0.42□□□□□ -2.34
Best1O88870 Gm22100-201ENSMUST00000157926 63 ntBASIC0.42□□□□□ -2.34
Best1O88870 Gm44828-201ENSMUST00000203745 106 ntBASIC0.42□□□□□ -2.34
Best1O88870 Gm24524-201ENSMUST00000082925 170 ntBASIC0.42□□□□□ -2.34
Best1O88870 Gm22212-201ENSMUST00000158096 106 ntBASIC0.41□□□□□ -2.34
Best1O88870 Gm25014-201ENSMUST00000158401 103 ntBASIC0.41□□□□□ -2.34
Best1O88870 Gm45429-201ENSMUST00000209527 172 ntBASIC0.41□□□□□ -2.34
Best1O88870 Gm22759-201ENSMUST00000102276 96 ntBASIC0.4□□□□□ -2.35
Best1O88870 Gm23126-201ENSMUST00000104260 134 ntBASIC0.4□□□□□ -2.35
Best1O88870 Gm22772-201ENSMUST00000104451 121 ntBASIC0.4□□□□□ -2.35
Best1O88870 Gm22384-201ENSMUST00000158187 104 ntBASIC0.4□□□□□ -2.35
Best1O88870 Gm25408-201ENSMUST00000104104 133 ntBASIC0.39□□□□□ -2.35
Best1O88870 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC0.39□□□□□ -2.35
Best1O88870 Gm26369-201ENSMUST00000157825 100 ntBASIC0.39□□□□□ -2.35
Best1O88870 Gm27475-201ENSMUST00000183420 61 ntBASIC0.39□□□□□ -2.35
Best1O88870 Scarna8-201ENSMUST00000158333 131 ntBASIC0.38□□□□□ -2.35
Best1O88870 Gm25915-201ENSMUST00000104265 126 ntBASIC0.37□□□□□ -2.35
Best1O88870 Gm26303-201ENSMUST00000116845 119 ntBASIC0.37□□□□□ -2.35
Best1O88870 Gm23351-201ENSMUST00000158427 125 ntBASIC0.37□□□□□ -2.35
Best1O88870 Gm23384-201ENSMUST00000158593 103 ntBASIC0.37□□□□□ -2.35
Best1O88870 Gm45197-201ENSMUST00000205288 151 ntBASIC0.37□□□□□ -2.35
Best1O88870 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.37□□□□□ -2.35
Best1O88870 AC164561.1-201ENSMUST00000220414 115 ntBASIC0.37□□□□□ -2.35
Best1O88870 Gm24648-201ENSMUST00000157111 132 ntBASIC0.36□□□□□ -2.35
Best1O88870 Gm28270-201ENSMUST00000188550 109 ntBASIC0.36□□□□□ -2.35
Best1O88870 Gm28328-201ENSMUST00000188869 109 ntBASIC0.36□□□□□ -2.35
Best1O88870 Gm44345-201ENSMUST00000199560 135 ntBASIC0.36□□□□□ -2.35
Best1O88870 Gm23344-201ENSMUST00000083818 68 ntBASIC0.36□□□□□ -2.35
Best1O88870 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.36□□□□□ -2.35
Best1O88870 Mir219b-201ENSMUST00000198317 65 ntBASIC0.35□□□□□ -2.35
Best1O88870 Gm25887-201ENSMUST00000157777 84 ntBASIC0.34□□□□□ -2.36
Best1O88870 Gm22706-201ENSMUST00000157907 112 ntBASIC0.34□□□□□ -2.36
Best1O88870 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC0.34□□□□□ -2.36
Best1O88870 Gm22509-201ENSMUST00000082775 107 ntBASIC0.34□□□□□ -2.36
Best1O88870 Gm23969-201ENSMUST00000083324 74 ntBASIC0.34□□□□□ -2.36
Best1O88870 Gm26116-201ENSMUST00000175600 77 ntBASIC0.33□□□□□ -2.36
Best1O88870 Gm24926-201ENSMUST00000178053 79 ntBASIC0.33□□□□□ -2.36
Best1O88870 Gm22632-201ENSMUST00000178266 79 ntBASIC0.33□□□□□ -2.36
Best1O88870 Gm23138-201ENSMUST00000083365 103 ntBASIC0.33□□□□□ -2.36
Best1O88870 Gm23060-201ENSMUST00000102345 109 ntBASIC0.32□□□□□ -2.36
Best1O88870 Gm25496-201ENSMUST00000104430 120 ntBASIC0.32□□□□□ -2.36
Best1O88870 Gm22503-201ENSMUST00000158983 115 ntBASIC0.32□□□□□ -2.36
Best1O88870 Gm23507-201ENSMUST00000083078 107 ntBASIC0.31□□□□□ -2.36
Best1O88870 Gm22431-201ENSMUST00000158545 107 ntBASIC0.3□□□□□ -2.36
Best1O88870 Mir3108-201ENSMUST00000175500 79 ntBASIC0.3□□□□□ -2.36
Best1O88870 mt-Tc-201ENSMUST00000082400 66 ntBASIC0.3□□□□□ -2.36
Best1O88870 Gm25899-201ENSMUST00000082672 141 ntBASIC0.3□□□□□ -2.36
Best1O88870 Mir369-201ENSMUST00000083627 79 ntBASIC0.3□□□□□ -2.36
Best1O88870 Snord80-201ENSMUST00000083801 81 ntBASIC0.3□□□□□ -2.36
Best1O88870 Gm24894-201ENSMUST00000122744 118 ntBASIC0.29□□□□□ -2.36
Best1O88870 Gm24399-201ENSMUST00000157869 74 ntBASIC0.29□□□□□ -2.36
Best1O88870 Gm24947-201ENSMUST00000158334 110 ntBASIC0.29□□□□□ -2.36
Best1O88870 Gm24167-201ENSMUST00000177733 124 ntBASIC0.29□□□□□ -2.36
Best1O88870 Gm24028-201ENSMUST00000178991 124 ntBASIC0.29□□□□□ -2.36
Best1O88870 Gm44327-201ENSMUST00000200068 117 ntBASIC0.29□□□□□ -2.36
Best1O88870 Gm43907-201ENSMUST00000203128 117 ntBASIC0.29□□□□□ -2.36
Best1O88870 Gm25756-201ENSMUST00000103990 136 ntBASIC0.28□□□□□ -2.36
Best1O88870 Gm25753-201ENSMUST00000116792 121 ntBASIC0.28□□□□□ -2.36
Best1O88870 Mup-ps5-201ENSMUST00000118667 99 ntBASIC0.28□□□□□ -2.36
Best1O88870 Gm26152-201ENSMUST00000157427 101 ntBASIC0.28□□□□□ -2.36
Best1O88870 Gm25678-201ENSMUST00000174984 73 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 152.9 ms