Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 Gm25851-201ENSMUST00000082794 107 ntBASIC1.21□□□□□ -2.22
Lmx1bO88609 Mir709-201ENSMUST00000102190 88 ntBASIC1.2□□□□□ -2.22
Lmx1bO88609 Snord71-201ENSMUST00000104361 85 ntBASIC1.2□□□□□ -2.22
Lmx1bO88609 Gm12469-201ENSMUST00000117623 207 ntBASIC1.2□□□□□ -2.22
Lmx1bO88609 Gm24915-201ENSMUST00000157288 78 ntBASIC1.2□□□□□ -2.22
Lmx1bO88609 Mir1954-201ENSMUST00000175595 86 ntBASIC1.2□□□□□ -2.22
Lmx1bO88609 Gm25635-201ENSMUST00000082675 131 ntBASIC1.2□□□□□ -2.22
Lmx1bO88609 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.2□□□□□ -2.22
Lmx1bO88609 Mir653-201ENSMUST00000102402 85 ntBASIC1.19□□□□□ -2.22
Lmx1bO88609 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC1.19□□□□□ -2.22
Lmx1bO88609 Snord13-201ENSMUST00000157627 104 ntBASIC1.19□□□□□ -2.22
Lmx1bO88609 Gm24399-201ENSMUST00000157869 74 ntBASIC1.19□□□□□ -2.22
Lmx1bO88609 Gm25014-201ENSMUST00000158401 103 ntBASIC1.19□□□□□ -2.22
Lmx1bO88609 Gm23114-201ENSMUST00000158478 117 ntBASIC1.19□□□□□ -2.22
Lmx1bO88609 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
Lmx1bO88609 Gm24342-201ENSMUST00000103907 104 ntBASIC1.18□□□□□ -2.22
Lmx1bO88609 Gm25110-201ENSMUST00000116684 121 ntBASIC1.18□□□□□ -2.22
Lmx1bO88609 Gm25775-201ENSMUST00000116716 121 ntBASIC1.18□□□□□ -2.22
Lmx1bO88609 Gm24795-201ENSMUST00000116737 121 ntBASIC1.18□□□□□ -2.22
Lmx1bO88609 Gm25171-201ENSMUST00000116926 121 ntBASIC1.18□□□□□ -2.22
Lmx1bO88609 Gm11694-201ENSMUST00000118637 159 ntBASIC1.18□□□□□ -2.22
Lmx1bO88609 Gm23900-201ENSMUST00000157569 108 ntBASIC1.18□□□□□ -2.22
Lmx1bO88609 Gm22862-201ENSMUST00000178593 121 ntBASIC1.18□□□□□ -2.22
Lmx1bO88609 Mir7052-201ENSMUST00000184821 65 ntBASIC1.18□□□□□ -2.22
Lmx1bO88609 Gm44602-201ENSMUST00000205948 132 ntBASIC1.18□□□□□ -2.22
Lmx1bO88609 Mir344-201ENSMUST00000083634 95 ntBASIC1.18□□□□□ -2.22
Lmx1bO88609 Gm25681-201ENSMUST00000083938 106 ntBASIC1.18□□□□□ -2.22
Lmx1bO88609 Gm26301-201ENSMUST00000104813 95 ntBASIC1.17□□□□□ -2.22
Lmx1bO88609 Gm24476-201ENSMUST00000157437 131 ntBASIC1.17□□□□□ -2.22
Lmx1bO88609 Gm23917-201ENSMUST00000175256 98 ntBASIC1.17□□□□□ -2.22
Lmx1bO88609 Gm23369-201ENSMUST00000175406 105 ntBASIC1.17□□□□□ -2.22
Lmx1bO88609 Gm25633-201ENSMUST00000178565 107 ntBASIC1.17□□□□□ -2.22
Lmx1bO88609 Mir7063-201ENSMUST00000184158 91 ntBASIC1.17□□□□□ -2.22
Lmx1bO88609 Mir6390-201ENSMUST00000184405 129 ntBASIC1.17□□□□□ -2.22
Lmx1bO88609 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
Lmx1bO88609 Gm27656-201ENSMUST00000185055 80 ntBASIC1.17□□□□□ -2.22
Lmx1bO88609 Gm45197-201ENSMUST00000205288 151 ntBASIC1.17□□□□□ -2.22
Lmx1bO88609 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.17□□□□□ -2.22
Lmx1bO88609 Gm22805-201ENSMUST00000082739 107 ntBASIC1.17□□□□□ -2.22
Lmx1bO88609 Mir324-201ENSMUST00000083600 89 ntBASIC1.17□□□□□ -2.22
Lmx1bO88609 Gm22827-201ENSMUST00000083766 107 ntBASIC1.17□□□□□ -2.22
Lmx1bO88609 Gm25629-201ENSMUST00000084001 107 ntBASIC1.17□□□□□ -2.22
Lmx1bO88609 AC127302.3-201ENSMUST00000215480 2791 ntBASIC1.16□□□□□ -2.22
Lmx1bO88609 Gm23482-201ENSMUST00000104172 122 ntBASIC1.16□□□□□ -2.22
Lmx1bO88609 Gm22559-201ENSMUST00000157329 134 ntBASIC1.16□□□□□ -2.22
Lmx1bO88609 Gm26133-201ENSMUST00000157363 100 ntBASIC1.16□□□□□ -2.22
Lmx1bO88609 Gm23328-201ENSMUST00000157418 132 ntBASIC1.16□□□□□ -2.22
Lmx1bO88609 Gm24547-201ENSMUST00000158649 149 ntBASIC1.16□□□□□ -2.22
Lmx1bO88609 Gm27420-201ENSMUST00000183823 79 ntBASIC1.16□□□□□ -2.22
Lmx1bO88609 Mir6394-201ENSMUST00000184738 99 ntBASIC1.16□□□□□ -2.22
Lmx1bO88609 Gm22544-201ENSMUST00000104349 127 ntBASIC1.15□□□□□ -2.23
Lmx1bO88609 Gm22679-201ENSMUST00000116975 100 ntBASIC1.15□□□□□ -2.23
Lmx1bO88609 Gm10548-202ENSMUST00000165672 272 ntBASIC1.15□□□□□ -2.23
Lmx1bO88609 Traj60-201ENSMUST00000167781 54 ntBASIC1.15□□□□□ -2.23
Lmx1bO88609 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.15□□□□□ -2.23
Lmx1bO88609 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.15□□□□□ -2.23
Lmx1bO88609 Gm44469-201ENSMUST00000198558 79 ntBASIC1.15□□□□□ -2.23
Lmx1bO88609 Gm26224-201ENSMUST00000082506 80 ntBASIC1.15□□□□□ -2.23
Lmx1bO88609 Gm24624-201ENSMUST00000082617 164 ntBASIC1.15□□□□□ -2.23
Lmx1bO88609 Mir211-201ENSMUST00000083651 106 ntBASIC1.15□□□□□ -2.23
Lmx1bO88609 Gm23130-201ENSMUST00000104252 74 ntBASIC1.14□□□□□ -2.23
Lmx1bO88609 Gm23857-201ENSMUST00000158379 111 ntBASIC1.14□□□□□ -2.23
Lmx1bO88609 Gm36956-201ENSMUST00000193830 214 ntBASIC1.14□□□□□ -2.23
Lmx1bO88609 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.14□□□□□ -2.23
Lmx1bO88609 Gm44488-201ENSMUST00000199467 119 ntBASIC1.14□□□□□ -2.23
Lmx1bO88609 Gm22753-201ENSMUST00000083657 107 ntBASIC1.14□□□□□ -2.23
Lmx1bO88609 Gm22780-201ENSMUST00000104084 132 ntBASIC1.13□□□□□ -2.23
Lmx1bO88609 Gm24129-201ENSMUST00000158537 97 ntBASIC1.13□□□□□ -2.23
Lmx1bO88609 Gm23339-201ENSMUST00000158962 139 ntBASIC1.13□□□□□ -2.23
Lmx1bO88609 Gm23636-201ENSMUST00000175070 95 ntBASIC1.13□□□□□ -2.23
Lmx1bO88609 Gm24865-201ENSMUST00000103246 96 ntBASIC1.12□□□□□ -2.23
Lmx1bO88609 Gm25112-201ENSMUST00000122680 104 ntBASIC1.12□□□□□ -2.23
Lmx1bO88609 Gm44483-201ENSMUST00000197203 97 ntBASIC1.12□□□□□ -2.23
Lmx1bO88609 Gm25759-201ENSMUST00000103988 129 ntBASIC1.11□□□□□ -2.23
Lmx1bO88609 Gm25496-201ENSMUST00000104430 120 ntBASIC1.11□□□□□ -2.23
Lmx1bO88609 Gm23661-201ENSMUST00000122630 87 ntBASIC1.11□□□□□ -2.23
Lmx1bO88609 Gm24686-201ENSMUST00000157755 93 ntBASIC1.11□□□□□ -2.23
Lmx1bO88609 Gm22140-201ENSMUST00000158745 120 ntBASIC1.11□□□□□ -2.23
Lmx1bO88609 Mir1933-201ENSMUST00000158930 88 ntBASIC1.11□□□□□ -2.23
Lmx1bO88609 Gm16399-201ENSMUST00000181423 219 ntBASIC1.11□□□□□ -2.23
Lmx1bO88609 Gm27993-201ENSMUST00000184362 85 ntBASIC1.11□□□□□ -2.23
Lmx1bO88609 Mir6985-201ENSMUST00000184641 61 ntBASIC1.11□□□□□ -2.23
Lmx1bO88609 Gm23347-201ENSMUST00000083823 82 ntBASIC1.11□□□□□ -2.23
Lmx1bO88609 Gm22515-201ENSMUST00000158273 305 ntBASIC1.1□□□□□ -2.23
Lmx1bO88609 Gm25600-201ENSMUST00000158357 106 ntBASIC1.1□□□□□ -2.23
Lmx1bO88609 Gm26158-201ENSMUST00000158973 119 ntBASIC1.1□□□□□ -2.23
Lmx1bO88609 Gm22565-201ENSMUST00000175540 69 ntBASIC1.1□□□□□ -2.23
Lmx1bO88609 Gm43944-201ENSMUST00000205220 120 ntBASIC1.1□□□□□ -2.23
Lmx1bO88609 Gm26202-201ENSMUST00000082910 65 ntBASIC1.1□□□□□ -2.23
Lmx1bO88609 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
Lmx1bO88609 Gm24009-201ENSMUST00000157734 93 ntBASIC1.09□□□□□ -2.23
Lmx1bO88609 Gm22485-201ENSMUST00000157990 109 ntBASIC1.09□□□□□ -2.23
Lmx1bO88609 Gm24808-201ENSMUST00000157993 118 ntBASIC1.09□□□□□ -2.23
Lmx1bO88609 Gm26029-201ENSMUST00000158659 132 ntBASIC1.09□□□□□ -2.23
Lmx1bO88609 Gm24637-201ENSMUST00000158674 85 ntBASIC1.09□□□□□ -2.23
Lmx1bO88609 Gm23340-201ENSMUST00000158955 123 ntBASIC1.09□□□□□ -2.23
Lmx1bO88609 Gm26441-201ENSMUST00000082590 104 ntBASIC1.09□□□□□ -2.23
Lmx1bO88609 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.08□□□□□ -2.24
Lmx1bO88609 Gm26274-201ENSMUST00000157103 321 ntBASIC1.08□□□□□ -2.24
Lmx1bO88609 Gm22605-201ENSMUST00000158289 108 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 143.2 ms