Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Gm23622-201ENSMUST00000082460 107 ntBASIC0.51□□□□□ -2.33
Capn1O35350 Gm25894-201ENSMUST00000083458 75 ntBASIC0.51□□□□□ -2.33
Capn1O35350 Gm23783-201ENSMUST00000157941 102 ntBASIC0.5□□□□□ -2.33
Capn1O35350 Gm26498-201ENSMUST00000177799 79 ntBASIC0.5□□□□□ -2.33
Capn1O35350 Gm26230-201ENSMUST00000180141 79 ntBASIC0.5□□□□□ -2.33
Capn1O35350 Gm38298-201ENSMUST00000193578 118 ntBASIC0.5□□□□□ -2.33
Capn1O35350 Gm44457-201ENSMUST00000198109 76 ntBASIC0.5□□□□□ -2.33
Capn1O35350 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
Capn1O35350 Gm26202-201ENSMUST00000082910 65 ntBASIC0.5□□□□□ -2.33
Capn1O35350 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.49□□□□□ -2.33
Capn1O35350 Gm11694-201ENSMUST00000118637 159 ntBASIC0.49□□□□□ -2.33
Capn1O35350 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC0.49□□□□□ -2.33
Capn1O35350 Gm25974-201ENSMUST00000158701 94 ntBASIC0.49□□□□□ -2.33
Capn1O35350 Gm22302-201ENSMUST00000082657 106 ntBASIC0.49□□□□□ -2.33
Capn1O35350 Gm25040-201ENSMUST00000103877 66 ntBASIC0.48□□□□□ -2.33
Capn1O35350 Gm24278-201ENSMUST00000104239 127 ntBASIC0.48□□□□□ -2.33
Capn1O35350 Gm23661-201ENSMUST00000122630 87 ntBASIC0.48□□□□□ -2.33
Capn1O35350 Gm24649-201ENSMUST00000157106 134 ntBASIC0.48□□□□□ -2.33
Capn1O35350 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.48□□□□□ -2.33
Capn1O35350 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC0.47□□□□□ -2.33
Capn1O35350 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
Capn1O35350 Gm24009-201ENSMUST00000157734 93 ntBASIC0.47□□□□□ -2.33
Capn1O35350 Gm22983-201ENSMUST00000158308 104 ntBASIC0.47□□□□□ -2.33
Capn1O35350 Gm23350-201ENSMUST00000158429 103 ntBASIC0.47□□□□□ -2.33
Capn1O35350 Mir7079-201ENSMUST00000184697 69 ntBASIC0.47□□□□□ -2.33
Capn1O35350 Gm26062-201ENSMUST00000083379 107 ntBASIC0.47□□□□□ -2.33
Capn1O35350 Gm24233-201ENSMUST00000104317 122 ntBASIC0.46□□□□□ -2.34
Capn1O35350 AC164561.1-201ENSMUST00000220414 115 ntBASIC0.46□□□□□ -2.34
Capn1O35350 Gm22297-201ENSMUST00000083312 106 ntBASIC0.46□□□□□ -2.34
Capn1O35350 Gm25006-201ENSMUST00000083813 107 ntBASIC0.46□□□□□ -2.34
Capn1O35350 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
Capn1O35350 Snord64-201ENSMUST00000104003 67 ntBASIC0.45□□□□□ -2.34
Capn1O35350 Gm23672-201ENSMUST00000157471 107 ntBASIC0.45□□□□□ -2.34
Capn1O35350 Gm22788-201ENSMUST00000157876 61 ntBASIC0.45□□□□□ -2.34
Capn1O35350 Gm22239-201ENSMUST00000175220 103 ntBASIC0.45□□□□□ -2.34
Capn1O35350 Gm23601-201ENSMUST00000157259 131 ntBASIC0.43□□□□□ -2.34
Capn1O35350 Mir7065-201ENSMUST00000185110 61 ntBASIC0.43□□□□□ -2.34
Capn1O35350 Gm43432-201ENSMUST00000196352 121 ntBASIC0.43□□□□□ -2.34
Capn1O35350 Gm43927-201ENSMUST00000204599 117 ntBASIC0.43□□□□□ -2.34
Capn1O35350 Gm45429-201ENSMUST00000209527 172 ntBASIC0.43□□□□□ -2.34
Capn1O35350 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.42□□□□□ -2.34
Capn1O35350 Gm26133-201ENSMUST00000157363 100 ntBASIC0.42□□□□□ -2.34
Capn1O35350 Gm23482-201ENSMUST00000104172 122 ntBASIC0.41□□□□□ -2.34
Capn1O35350 Gm23351-201ENSMUST00000158427 125 ntBASIC0.41□□□□□ -2.34
Capn1O35350 Gm23384-201ENSMUST00000158593 103 ntBASIC0.41□□□□□ -2.34
Capn1O35350 Mir3105-201ENSMUST00000175480 85 ntBASIC0.41□□□□□ -2.34
Capn1O35350 Gm25633-201ENSMUST00000178565 107 ntBASIC0.41□□□□□ -2.34
Capn1O35350 Gm44828-201ENSMUST00000203745 106 ntBASIC0.41□□□□□ -2.34
Capn1O35350 n-R5s96-201ENSMUST00000082574 124 ntBASIC0.41□□□□□ -2.34
Capn1O35350 Gm24524-201ENSMUST00000082925 170 ntBASIC0.41□□□□□ -2.34
Capn1O35350 Gm25915-201ENSMUST00000104265 126 ntBASIC0.4□□□□□ -2.35
Capn1O35350 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC0.4□□□□□ -2.35
Capn1O35350 Gm26369-201ENSMUST00000157825 100 ntBASIC0.4□□□□□ -2.35
Capn1O35350 Gm25978-201ENSMUST00000158698 90 ntBASIC0.4□□□□□ -2.35
Capn1O35350 Gm22303-201ENSMUST00000082686 122 ntBASIC0.4□□□□□ -2.35
Capn1O35350 Gm23900-201ENSMUST00000157569 108 ntBASIC0.39□□□□□ -2.35
Capn1O35350 Gm22212-201ENSMUST00000158096 106 ntBASIC0.39□□□□□ -2.35
Capn1O35350 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
Capn1O35350 Gm24555-201ENSMUST00000104548 124 ntBASIC0.38□□□□□ -2.35
Capn1O35350 Mir1197-201ENSMUST00000117037 120 ntBASIC0.38□□□□□ -2.35
Capn1O35350 Gm23654-201ENSMUST00000116758 126 ntBASIC0.37□□□□□ -2.35
Capn1O35350 Gm24073-201ENSMUST00000158177 106 ntBASIC0.37□□□□□ -2.35
Capn1O35350 Gm25161-201ENSMUST00000158913 132 ntBASIC0.37□□□□□ -2.35
Capn1O35350 Gm25618-201ENSMUST00000179484 107 ntBASIC0.37□□□□□ -2.35
Capn1O35350 Gm27475-201ENSMUST00000183420 61 ntBASIC0.37□□□□□ -2.35
Capn1O35350 Gm22772-201ENSMUST00000104451 121 ntBASIC0.36□□□□□ -2.35
Capn1O35350 Scarna8-201ENSMUST00000158333 131 ntBASIC0.36□□□□□ -2.35
Capn1O35350 Gm22089-201ENSMUST00000158336 102 ntBASIC0.36□□□□□ -2.35
Capn1O35350 Mir3473d-201ENSMUST00000175346 81 ntBASIC0.36□□□□□ -2.35
Capn1O35350 Gm45197-201ENSMUST00000205288 151 ntBASIC0.36□□□□□ -2.35
Capn1O35350 Gm26303-201ENSMUST00000116845 119 ntBASIC0.35□□□□□ -2.35
Capn1O35350 Gm25887-201ENSMUST00000157777 84 ntBASIC0.35□□□□□ -2.35
Capn1O35350 Gm22503-201ENSMUST00000158983 115 ntBASIC0.35□□□□□ -2.35
Capn1O35350 Gm43324-201ENSMUST00000197482 289 ntBASIC0.35□□□□□ -2.35
Capn1O35350 Mir216b-201ENSMUST00000102363 86 ntBASIC0.34□□□□□ -2.36
Capn1O35350 Gm25014-201ENSMUST00000158401 103 ntBASIC0.34□□□□□ -2.36
Capn1O35350 Gm28270-201ENSMUST00000188550 109 ntBASIC0.34□□□□□ -2.36
Capn1O35350 Gm28328-201ENSMUST00000188869 109 ntBASIC0.34□□□□□ -2.36
Capn1O35350 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.34□□□□□ -2.36
Capn1O35350 Gm22759-201ENSMUST00000102276 96 ntBASIC0.33□□□□□ -2.36
Capn1O35350 Gm23708-201ENSMUST00000104367 123 ntBASIC0.33□□□□□ -2.36
Capn1O35350 Gm24648-201ENSMUST00000157111 132 ntBASIC0.33□□□□□ -2.36
Capn1O35350 Gm22340-201ENSMUST00000157717 114 ntBASIC0.33□□□□□ -2.36
Capn1O35350 Gm22706-201ENSMUST00000157907 112 ntBASIC0.33□□□□□ -2.36
Capn1O35350 Gm25247-201ENSMUST00000175475 90 ntBASIC0.33□□□□□ -2.36
Capn1O35350 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC0.33□□□□□ -2.36
Capn1O35350 Gm23344-201ENSMUST00000083818 68 ntBASIC0.33□□□□□ -2.36
Capn1O35350 Gm25408-201ENSMUST00000104104 133 ntBASIC0.32□□□□□ -2.36
Capn1O35350 Gm12086-201ENSMUST00000120863 228 ntBASIC0.32□□□□□ -2.36
Capn1O35350 Gm24772-201ENSMUST00000158507 110 ntBASIC0.32□□□□□ -2.36
Capn1O35350 Gm24208-201ENSMUST00000082783 135 ntBASIC0.32□□□□□ -2.36
Capn1O35350 Gm23969-201ENSMUST00000083324 74 ntBASIC0.32□□□□□ -2.36
Capn1O35350 Mir224-201ENSMUST00000083608 82 ntBASIC0.32□□□□□ -2.36
Capn1O35350 Mir1a-1-201ENSMUST00000093635 77 ntBASIC0.32□□□□□ -2.36
Capn1O35350 Gm24833-201ENSMUST00000116775 120 ntBASIC0.31□□□□□ -2.36
Capn1O35350 Gm23507-201ENSMUST00000083078 107 ntBASIC0.31□□□□□ -2.36
Capn1O35350 Mir670-201ENSMUST00000102380 100 ntBASIC0.3□□□□□ -2.36
Capn1O35350 Mir7077-201ENSMUST00000183991 57 ntBASIC0.3□□□□□ -2.36
Capn1O35350 Gm26116-201ENSMUST00000175600 77 ntBASIC0.29□□□□□ -2.36
Capn1O35350 Gm44327-201ENSMUST00000200068 117 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms