Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Gm13231-201ENSMUST00000119218 2850 ntBASIC1,22□□□□□ -2,21
Trim55G3X8Y1 Gm43960-201ENSMUST00000204249 5020 ntBASIC1,22□□□□□ -2,21
Trim55G3X8Y1 Gm23336-201ENSMUST00000117023 123 ntBASIC1,22□□□□□ -2,21
Trim55G3X8Y1 Gm22706-201ENSMUST00000157907 112 ntBASIC1,22□□□□□ -2,21
Trim55G3X8Y1 Gm25600-201ENSMUST00000158357 106 ntBASIC1,22□□□□□ -2,21
Trim55G3X8Y1 Mir6962-201ENSMUST00000199512 63 ntBASIC1,22□□□□□ -2,21
Trim55G3X8Y1 Gm26109-201ENSMUST00000083970 70 ntBASIC1,22□□□□□ -2,21
Trim55G3X8Y1 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1,22□□□□□ -2,21
Trim55G3X8Y1 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1,21□□□□□ -2,22
Trim55G3X8Y1 Gm25056-201ENSMUST00000157372 62 ntBASIC1,21□□□□□ -2,22
Trim55G3X8Y1 Gm23853-201ENSMUST00000158375 104 ntBASIC1,21□□□□□ -2,22
Trim55G3X8Y1 Gm24129-201ENSMUST00000158537 97 ntBASIC1,21□□□□□ -2,22
Trim55G3X8Y1 Gm23917-201ENSMUST00000175256 98 ntBASIC1,21□□□□□ -2,22
Trim55G3X8Y1 Gm25337-201ENSMUST00000083723 104 ntBASIC1,21□□□□□ -2,22
Trim55G3X8Y1 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1,2□□□□□ -2,22
Trim55G3X8Y1 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1,2□□□□□ -2,22
Trim55G3X8Y1 Gm26089-201ENSMUST00000157898 107 ntBASIC1,2□□□□□ -2,22
Trim55G3X8Y1 Mir3098-201ENSMUST00000175416 87 ntBASIC1,2□□□□□ -2,22
Trim55G3X8Y1 AC211878.4-201ENSMUST00000220970 262 ntBASIC1,2□□□□□ -2,22
Trim55G3X8Y1 AC160962.3-201ENSMUST00000225914 112 ntBASIC1,2□□□□□ -2,22
Trim55G3X8Y1 Gm25899-201ENSMUST00000082672 141 ntBASIC1,2□□□□□ -2,22
Trim55G3X8Y1 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1,2□□□□□ -2,22
Trim55G3X8Y1 Mir343-201ENSMUST00000102360 75 ntBASIC1,19□□□□□ -2,22
Trim55G3X8Y1 Gm22212-201ENSMUST00000158096 106 ntBASIC1,19□□□□□ -2,22
Trim55G3X8Y1 Mir100-201ENSMUST00000175270 80 ntBASIC1,19□□□□□ -2,22
Trim55G3X8Y1 Mir6240-201ENSMUST00000184281 117 ntBASIC1,19□□□□□ -2,22
Trim55G3X8Y1 Gm45197-201ENSMUST00000205288 151 ntBASIC1,19□□□□□ -2,22
Trim55G3X8Y1 AC140930.2-201ENSMUST00000221803 109 ntBASIC1,19□□□□□ -2,22
Trim55G3X8Y1 mt-Tc-201ENSMUST00000082400 66 ntBASIC1,19□□□□□ -2,22
Trim55G3X8Y1 DQ267101-201ENSMUST00000082562 73 ntBASIC1,19□□□□□ -2,22
Trim55G3X8Y1 Gm22786-201ENSMUST00000104086 122 ntBASIC1,18□□□□□ -2,22
Trim55G3X8Y1 Gm23482-201ENSMUST00000104172 122 ntBASIC1,18□□□□□ -2,22
Trim55G3X8Y1 Gm26133-201ENSMUST00000157363 100 ntBASIC1,18□□□□□ -2,22
Trim55G3X8Y1 Gm23900-201ENSMUST00000157569 108 ntBASIC1,18□□□□□ -2,22
Trim55G3X8Y1 Gm25014-201ENSMUST00000158401 103 ntBASIC1,18□□□□□ -2,22
Trim55G3X8Y1 Mir3968-201ENSMUST00000175355 100 ntBASIC1,18□□□□□ -2,22
Trim55G3X8Y1 Gm37824-201ENSMUST00000193430 3236 ntBASIC1,18□□□□□ -2,22
Trim55G3X8Y1 Gm22030-201ENSMUST00000116942 63 ntBASIC1,17□□□□□ -2,22
Trim55G3X8Y1 Gm23661-201ENSMUST00000122630 87 ntBASIC1,17□□□□□ -2,22
Trim55G3X8Y1 Gm23416-201ENSMUST00000175520 95 ntBASIC1,17□□□□□ -2,22
Trim55G3X8Y1 Gm22544-201ENSMUST00000104349 127 ntBASIC1,16□□□□□ -2,22
Trim55G3X8Y1 Gm25393-201ENSMUST00000157336 285 ntBASIC1,16□□□□□ -2,22
Trim55G3X8Y1 Gm22541-201ENSMUST00000158165 127 ntBASIC1,16□□□□□ -2,22
Trim55G3X8Y1 Mir101a-201ENSMUST00000083517 83 ntBASIC1,16□□□□□ -2,22
Trim55G3X8Y1 Mir211-201ENSMUST00000083651 106 ntBASIC1,16□□□□□ -2,22
Trim55G3X8Y1 Gm25683-201ENSMUST00000083940 131 ntBASIC1,16□□□□□ -2,22
Trim55G3X8Y1 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1,16□□□□□ -2,22
Trim55G3X8Y1 Gm5581-201ENSMUST00000072940 2550 ntBASIC1,15□□□□□ -2,22
Trim55G3X8Y1 Gm23060-201ENSMUST00000102345 109 ntBASIC1,15□□□□□ -2,23
Trim55G3X8Y1 Gm26253-201ENSMUST00000122493 103 ntBASIC1,15□□□□□ -2,23
Trim55G3X8Y1 Gm24154-201ENSMUST00000175261 130 ntBASIC1,15□□□□□ -2,23
Trim55G3X8Y1 Gm27297-201ENSMUST00000183395 105 ntBASIC1,15□□□□□ -2,23
Trim55G3X8Y1 Gm24099-201ENSMUST00000083384 107 ntBASIC1,15□□□□□ -2,23
Trim55G3X8Y1 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC1,15□□□□□ -2,23
Trim55G3X8Y1 Gm14400-201ENSMUST00000117234 2135 ntBASIC1,14□□□□□ -2,23
Trim55G3X8Y1 Gm24009-201ENSMUST00000157734 93 ntBASIC1,14□□□□□ -2,23
Trim55G3X8Y1 Gm24399-201ENSMUST00000157869 74 ntBASIC1,14□□□□□ -2,23
Trim55G3X8Y1 Gm25974-201ENSMUST00000158701 94 ntBASIC1,14□□□□□ -2,23
Trim55G3X8Y1 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC1,14□□□□□ -2,23
Trim55G3X8Y1 Gm44211-201ENSMUST00000204867 145 ntBASIC1,14□□□□□ -2,23
Trim55G3X8Y1 mt-Tn-201ENSMUST00000082399 71 ntBASIC1,14□□□□□ -2,23
Trim55G3X8Y1 Gm25138-201ENSMUST00000083248 136 ntBASIC1,14□□□□□ -2,23
Trim55G3X8Y1 Gm23244-201ENSMUST00000083375 92 ntBASIC1,14□□□□□ -2,23
Trim55G3X8Y1 Gm23329-201ENSMUST00000157415 108 ntBASIC1,13□□□□□ -2,23
Trim55G3X8Y1 Mir7059-201ENSMUST00000184825 59 ntBASIC1,13□□□□□ -2,23
Trim55G3X8Y1 Gm26202-201ENSMUST00000082910 65 ntBASIC1,13□□□□□ -2,23
Trim55G3X8Y1 Snord35a-201ENSMUST00000083884 90 ntBASIC1,13□□□□□ -2,23
Trim55G3X8Y1 Scarna3a-201ENSMUST00000158911 140 ntBASIC1,12□□□□□ -2,23
Trim55G3X8Y1 Gm25635-201ENSMUST00000082675 131 ntBASIC1,12□□□□□ -2,23
Trim55G3X8Y1 Snord32a-201ENSMUST00000083285 83 ntBASIC1,12□□□□□ -2,23
Trim55G3X8Y1 Mir450b-201ENSMUST00000102095 82 ntBASIC1,11□□□□□ -2,23
Trim55G3X8Y1 Gm22780-201ENSMUST00000104084 132 ntBASIC1,11□□□□□ -2,23
Trim55G3X8Y1 Gm22673-201ENSMUST00000104415 131 ntBASIC1,11□□□□□ -2,23
Trim55G3X8Y1 Gm23989-201ENSMUST00000117030 66 ntBASIC1,11□□□□□ -2,23
Trim55G3X8Y1 Gm12432-201ENSMUST00000119540 186 ntBASIC1,11□□□□□ -2,23
Trim55G3X8Y1 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC1,11□□□□□ -2,23
Trim55G3X8Y1 Gm27419-201ENSMUST00000184576 109 ntBASIC1,11□□□□□ -2,23
Trim55G3X8Y1 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1,11□□□□□ -2,23
Trim55G3X8Y1 Mir33-201ENSMUST00000083531 69 ntBASIC1,11□□□□□ -2,23
Trim55G3X8Y1 Gm25274-201ENSMUST00000104296 135 ntBASIC1,1□□□□□ -2,23
Trim55G3X8Y1 Gm24650-201ENSMUST00000157105 103 ntBASIC1,1□□□□□ -2,23
Trim55G3X8Y1 Gm23893-201ENSMUST00000158106 134 ntBASIC1,1□□□□□ -2,23
Trim55G3X8Y1 AC132833.2-201ENSMUST00000228699 157 ntBASIC1,1□□□□□ -2,23
Trim55G3X8Y1 Mir377-201ENSMUST00000083504 68 ntBASIC1,1□□□□□ -2,23
Trim55G3X8Y1 Gm24252-201ENSMUST00000083700 132 ntBASIC1,1□□□□□ -2,23
Trim55G3X8Y1 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC1,09□□□□□ -2,23
Trim55G3X8Y1 n-R5s6-201ENSMUST00000122663 88 ntBASIC1,09□□□□□ -2,23
Trim55G3X8Y1 Gm24648-201ENSMUST00000157111 132 ntBASIC1,09□□□□□ -2,23
Trim55G3X8Y1 Gm26029-201ENSMUST00000158659 132 ntBASIC1,09□□□□□ -2,23
Trim55G3X8Y1 Mir6342-201ENSMUST00000183870 125 ntBASIC1,09□□□□□ -2,23
Trim55G3X8Y1 Mir7052-201ENSMUST00000184821 65 ntBASIC1,09□□□□□ -2,23
Trim55G3X8Y1 Gm26301-201ENSMUST00000104813 95 ntBASIC1,08□□□□□ -2,24
Trim55G3X8Y1 Gm23328-201ENSMUST00000157418 132 ntBASIC1,08□□□□□ -2,24
Trim55G3X8Y1 Gm22845-201ENSMUST00000157712 104 ntBASIC1,08□□□□□ -2,24
Trim55G3X8Y1 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC1,08□□□□□ -2,24
Trim55G3X8Y1 Gm23636-201ENSMUST00000175070 95 ntBASIC1,08□□□□□ -2,24
Trim55G3X8Y1 Mir3083-201ENSMUST00000175377 64 ntBASIC1,08□□□□□ -2,24
Trim55G3X8Y1 Mir8119-201ENSMUST00000183371 129 ntBASIC1,08□□□□□ -2,24
Trim55G3X8Y1 Mir6237-201ENSMUST00000183808 91 ntBASIC1,08□□□□□ -2,24
Trim55G3X8Y1 Mir7063-201ENSMUST00000184158 91 ntBASIC1,08□□□□□ -2,24
Retrieved 100 of 76,532 protein–RNA pairs in 11,5 ms