Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm23654-201ENSMUST00000116758 126 ntBASIC-0.31□□□□□ -2.46
Scn3aA2ASI5 n-R5s39-201ENSMUST00000122613 108 ntBASIC-0.31□□□□□ -2.46
Scn3aA2ASI5 Gm24718-201ENSMUST00000157521 136 ntBASIC-0.31□□□□□ -2.46
Scn3aA2ASI5 Gm27792-201ENSMUST00000184031 115 ntBASIC-0.31□□□□□ -2.46
Scn3aA2ASI5 Mir327-201ENSMUST00000199328 69 ntBASIC-0.31□□□□□ -2.46
Scn3aA2ASI5 Gm44922-201ENSMUST00000206690 90 ntBASIC-0.31□□□□□ -2.46
Scn3aA2ASI5 Snord2-201ENSMUST00000157899 69 ntBASIC-0.32□□□□□ -2.46
Scn3aA2ASI5 Mir1966-201ENSMUST00000158807 108 ntBASIC-0.32□□□□□ -2.46
Scn3aA2ASI5 Gm22169-201ENSMUST00000083229 107 ntBASIC-0.32□□□□□ -2.46
Scn3aA2ASI5 Mir126a-201ENSMUST00000083606 73 ntBASIC-0.32□□□□□ -2.46
Scn3aA2ASI5 Gm25338-201ENSMUST00000116849 120 ntBASIC-0.32□□□□□ -2.46
Scn3aA2ASI5 Gm23260-201ENSMUST00000158317 172 ntBASIC-0.32□□□□□ -2.46
Scn3aA2ASI5 Gm22348-201ENSMUST00000178674 79 ntBASIC-0.32□□□□□ -2.46
Scn3aA2ASI5 Gm22813-201ENSMUST00000199948 123 ntBASIC-0.32□□□□□ -2.46
Scn3aA2ASI5 AC158982.2-201ENSMUST00000226283 184 ntBASIC-0.32□□□□□ -2.46
Scn3aA2ASI5 Gm14502-201ENSMUST00000118154 113 ntBASIC-0.33□□□□□ -2.46
Scn3aA2ASI5 Gm26133-201ENSMUST00000157363 100 ntBASIC-0.33□□□□□ -2.46
Scn3aA2ASI5 Gm23258-201ENSMUST00000158319 106 ntBASIC-0.33□□□□□ -2.46
Scn3aA2ASI5 Gm22838-201ENSMUST00000158437 99 ntBASIC-0.33□□□□□ -2.46
Scn3aA2ASI5 Gm22139-201ENSMUST00000158747 105 ntBASIC-0.33□□□□□ -2.46
Scn3aA2ASI5 Gm17020-201ENSMUST00000172274 274 ntBASIC-0.33□□□□□ -2.46
Scn3aA2ASI5 Gm25756-201ENSMUST00000103990 136 ntBASIC-0.34□□□□□ -2.46
Scn3aA2ASI5 Gm24223-201ENSMUST00000158827 90 ntBASIC-0.34□□□□□ -2.46
Scn3aA2ASI5 Gm23337-201ENSMUST00000158959 118 ntBASIC-0.34□□□□□ -2.46
Scn3aA2ASI5 Gm23159-201ENSMUST00000175088 77 ntBASIC-0.34□□□□□ -2.46
Scn3aA2ASI5 Gm38295-201ENSMUST00000191951 151 ntBASIC-0.34□□□□□ -2.46
Scn3aA2ASI5 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.34□□□□□ -2.46
Scn3aA2ASI5 Gm24461-201ENSMUST00000082735 103 ntBASIC-0.34□□□□□ -2.46
Scn3aA2ASI5 Gm23601-201ENSMUST00000157259 131 ntBASIC-0.34□□□□□ -2.46
Scn3aA2ASI5 Gm25160-201ENSMUST00000158914 102 ntBASIC-0.34□□□□□ -2.46
Scn3aA2ASI5 Gm25328-201ENSMUST00000175013 107 ntBASIC-0.34□□□□□ -2.46
Scn3aA2ASI5 Gm23661-201ENSMUST00000122630 87 ntBASIC-0.35□□□□□ -2.47
Scn3aA2ASI5 Gm14947-201ENSMUST00000133704 303 ntBASIC-0.35□□□□□ -2.47
Scn3aA2ASI5 Gm24843-201ENSMUST00000158682 76 ntBASIC-0.35□□□□□ -2.47
Scn3aA2ASI5 Gm23504-201ENSMUST00000158988 95 ntBASIC-0.35□□□□□ -2.47
Scn3aA2ASI5 Traj61-201ENSMUST00000165025 72 ntBASIC-0.35□□□□□ -2.47
Scn3aA2ASI5 Gm25618-201ENSMUST00000179484 107 ntBASIC-0.35□□□□□ -2.47
Scn3aA2ASI5 Gm45688-201ENSMUST00000210002 101 ntBASIC-0.35□□□□□ -2.47
Scn3aA2ASI5 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC-0.36□□□□□ -2.47
Scn3aA2ASI5 Gm14838-201ENSMUST00000118913 248 ntBASIC-0.36□□□□□ -2.47
Scn3aA2ASI5 Mir7038-201ENSMUST00000184833 71 ntBASIC-0.36□□□□□ -2.47
Scn3aA2ASI5 mt-Tl1-201ENSMUST00000082391 75 ntBASIC-0.36□□□□□ -2.47
Scn3aA2ASI5 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC-0.36□□□□□ -2.47
Scn3aA2ASI5 Gm12013-201ENSMUST00000121971 155 ntBASIC-0.36□□□□□ -2.47
Scn3aA2ASI5 Gm22324-201ENSMUST00000158903 114 ntBASIC-0.36□□□□□ -2.47
Scn3aA2ASI5 Snora16a-202ENSMUST00000196061 137 ntBASIC-0.36□□□□□ -2.47
Scn3aA2ASI5 mt-Tw-201ENSMUST00000082397 67 ntBASIC-0.36□□□□□ -2.47
Scn3aA2ASI5 Gm26403-201ENSMUST00000158500 105 ntBASIC-0.37□□□□□ -2.47
Scn3aA2ASI5 Gm23918-201ENSMUST00000175253 106 ntBASIC-0.37□□□□□ -2.47
Scn3aA2ASI5 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC-0.37□□□□□ -2.47
Scn3aA2ASI5 Gm11694-201ENSMUST00000118637 159 ntBASIC-0.38□□□□□ -2.47
Scn3aA2ASI5 Gm26210-201ENSMUST00000158680 91 ntBASIC-0.38□□□□□ -2.47
Scn3aA2ASI5 Mir3094-201ENSMUST00000175121 64 ntBASIC-0.38□□□□□ -2.47
Scn3aA2ASI5 Mir466b-1-201ENSMUST00000177988 82 ntBASIC-0.38□□□□□ -2.47
Scn3aA2ASI5 Gm27884-201ENSMUST00000183865 76 ntBASIC-0.38□□□□□ -2.47
Scn3aA2ASI5 Gm26207-201ENSMUST00000082909 104 ntBASIC-0.38□□□□□ -2.47
Scn3aA2ASI5 Gm25056-201ENSMUST00000157372 62 ntBASIC-0.38□□□□□ -2.47
Scn3aA2ASI5 Gm24399-201ENSMUST00000157869 74 ntBASIC-0.38□□□□□ -2.47
Scn3aA2ASI5 Mir487b-201ENSMUST00000102265 82 ntBASIC-0.39□□□□□ -2.47
Scn3aA2ASI5 Mir669b-201ENSMUST00000102172 97 ntBASIC-0.4□□□□□ -2.47
Scn3aA2ASI5 Gm11644-201ENSMUST00000119735 150 ntBASIC-0.4□□□□□ -2.47
Scn3aA2ASI5 Gm22451-201ENSMUST00000122803 151 ntBASIC-0.4□□□□□ -2.47
Scn3aA2ASI5 Gm25522-201ENSMUST00000158394 105 ntBASIC-0.4□□□□□ -2.47
Scn3aA2ASI5 AC157602.1-201ENSMUST00000197446 105 ntBASIC-0.4□□□□□ -2.47
Scn3aA2ASI5 Gm22708-201ENSMUST00000158987 103 ntBASIC-0.4□□□□□ -2.47
Scn3aA2ASI5 Gm24913-201ENSMUST00000157286 107 ntBASIC-0.41□□□□□ -2.48
Scn3aA2ASI5 Mir344-2-201ENSMUST00000175446 80 ntBASIC-0.41□□□□□ -2.48
Scn3aA2ASI5 Mir6375-201ENSMUST00000197176 95 ntBASIC-0.41□□□□□ -2.48
Scn3aA2ASI5 Gm25797-201ENSMUST00000082640 107 ntBASIC-0.41□□□□□ -2.48
Scn3aA2ASI5 Snord67-201ENSMUST00000104033 111 ntBASIC-0.42□□□□□ -2.48
Scn3aA2ASI5 Gm25599-201ENSMUST00000157816 103 ntBASIC-0.42□□□□□ -2.48
Scn3aA2ASI5 Gm25388-201ENSMUST00000157339 151 ntBASIC-0.42□□□□□ -2.48
Scn3aA2ASI5 Gm25366-201ENSMUST00000158845 124 ntBASIC-0.42□□□□□ -2.48
Scn3aA2ASI5 Gm24983-201ENSMUST00000104457 69 ntBASIC-0.43□□□□□ -2.48
Scn3aA2ASI5 Snora26-201ENSMUST00000175614 121 ntBASIC-0.43□□□□□ -2.48
Scn3aA2ASI5 Gm26498-201ENSMUST00000177799 79 ntBASIC-0.43□□□□□ -2.48
Scn3aA2ASI5 Gm26230-201ENSMUST00000180141 79 ntBASIC-0.43□□□□□ -2.48
Scn3aA2ASI5 Gm44853-201ENSMUST00000209070 250 ntBASIC-0.43□□□□□ -2.48
Scn3aA2ASI5 Gm22542-201ENSMUST00000158166 95 ntBASIC-0.44□□□□□ -2.48
Scn3aA2ASI5 Gm22606-201ENSMUST00000158290 103 ntBASIC-0.44□□□□□ -2.48
Scn3aA2ASI5 Gm25596-201ENSMUST00000178368 107 ntBASIC-0.44□□□□□ -2.48
Scn3aA2ASI5 Gm24054-201ENSMUST00000158619 105 ntBASIC-0.44□□□□□ -2.48
Scn3aA2ASI5 Gm22699-201ENSMUST00000175376 105 ntBASIC-0.44□□□□□ -2.48
Scn3aA2ASI5 Gm37746-201ENSMUST00000193249 198 ntBASIC-0.44□□□□□ -2.48
Scn3aA2ASI5 Gm24374-201ENSMUST00000104394 106 ntBASIC-0.45□□□□□ -2.48
Scn3aA2ASI5 Gm25060-201ENSMUST00000157374 130 ntBASIC-0.45□□□□□ -2.48
Scn3aA2ASI5 Gm22212-201ENSMUST00000158096 106 ntBASIC-0.45□□□□□ -2.48
Scn3aA2ASI5 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC-0.45□□□□□ -2.48
Scn3aA2ASI5 Gm24218-201ENSMUST00000180163 105 ntBASIC-0.45□□□□□ -2.48
Scn3aA2ASI5 Gm26097-201ENSMUST00000179642 93 ntBASIC-0.46□□□□□ -2.48
Scn3aA2ASI5 AC151902.2-201ENSMUST00000226419 301 ntBASIC-0.46□□□□□ -2.48
Scn3aA2ASI5 Gm22966-201ENSMUST00000157957 129 ntBASIC-0.46□□□□□ -2.48
Scn3aA2ASI5 Mir669j-201ENSMUST00000179023 121 ntBASIC-0.46□□□□□ -2.48
Scn3aA2ASI5 Gm27928-201ENSMUST00000183747 256 ntBASIC-0.46□□□□□ -2.48
Scn3aA2ASI5 Gm23461-201ENSMUST00000083265 107 ntBASIC-0.46□□□□□ -2.48
Scn3aA2ASI5 Gm37750-201ENSMUST00000193563 129 ntBASIC-0.47□□□□□ -2.48
Scn3aA2ASI5 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC-0.47□□□□□ -2.48
Scn3aA2ASI5 Gm18502-201ENSMUST00000218679 199 ntBASIC-0.47□□□□□ -2.48
Scn3aA2ASI5 Mir764-201ENSMUST00000103259 108 ntBASIC-0.48□□□□□ -2.49
Scn3aA2ASI5 Mir466h-201ENSMUST00000104748 81 ntBASIC-0.48□□□□□ -2.49
Retrieved 100 of 76,532 protein–RNA pairs in 227.8 ms