Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Gm12013-201ENSMUST00000121971 155 ntBASIC0.49□□□□□ -2.33
H2afb1S4R1E0 Gm25600-201ENSMUST00000158357 106 ntBASIC0.49□□□□□ -2.33
H2afb1S4R1E0 Gm26398-201ENSMUST00000179015 127 ntBASIC0.49□□□□□ -2.33
H2afb1S4R1E0 Gm37330-201ENSMUST00000192606 153 ntBASIC0.49□□□□□ -2.33
H2afb1S4R1E0 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.49□□□□□ -2.33
H2afb1S4R1E0 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC0.49□□□□□ -2.33
H2afb1S4R1E0 Mir802-201ENSMUST00000103258 97 ntBASIC0.48□□□□□ -2.33
H2afb1S4R1E0 Gm22030-201ENSMUST00000116942 63 ntBASIC0.48□□□□□ -2.33
H2afb1S4R1E0 Gm14775-201ENSMUST00000122089 310 ntBASIC0.48□□□□□ -2.33
H2afb1S4R1E0 Gm22520-201ENSMUST00000158269 129 ntBASIC0.48□□□□□ -2.33
H2afb1S4R1E0 Gm23351-201ENSMUST00000158427 125 ntBASIC0.48□□□□□ -2.33
H2afb1S4R1E0 Mir3968-201ENSMUST00000175355 100 ntBASIC0.48□□□□□ -2.33
H2afb1S4R1E0 Gm23714-201ENSMUST00000179259 105 ntBASIC0.48□□□□□ -2.33
H2afb1S4R1E0 Gm22638-201ENSMUST00000179674 107 ntBASIC0.48□□□□□ -2.33
H2afb1S4R1E0 Mir8090-201ENSMUST00000185078 136 ntBASIC0.48□□□□□ -2.33
H2afb1S4R1E0 Gm44455-201ENSMUST00000200061 82 ntBASIC0.48□□□□□ -2.33
H2afb1S4R1E0 Gm25894-201ENSMUST00000083458 75 ntBASIC0.48□□□□□ -2.33
H2afb1S4R1E0 Gm22772-201ENSMUST00000104451 121 ntBASIC0.47□□□□□ -2.33
H2afb1S4R1E0 Gm12086-201ENSMUST00000120863 228 ntBASIC0.47□□□□□ -2.33
H2afb1S4R1E0 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC0.47□□□□□ -2.33
H2afb1S4R1E0 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC0.47□□□□□ -2.33
H2afb1S4R1E0 Gm22558-201ENSMUST00000157326 95 ntBASIC0.47□□□□□ -2.33
H2afb1S4R1E0 Gm27851-201ENSMUST00000183529 63 ntBASIC0.47□□□□□ -2.33
H2afb1S4R1E0 Gm29535-201ENSMUST00000185723 109 ntBASIC0.47□□□□□ -2.33
H2afb1S4R1E0 Gm28143-201ENSMUST00000191082 109 ntBASIC0.47□□□□□ -2.33
H2afb1S4R1E0 Gm43324-201ENSMUST00000197482 289 ntBASIC0.47□□□□□ -2.33
H2afb1S4R1E0 Gm22469-201ENSMUST00000104118 133 ntBASIC0.46□□□□□ -2.34
H2afb1S4R1E0 Gm23661-201ENSMUST00000122630 87 ntBASIC0.46□□□□□ -2.34
H2afb1S4R1E0 Gm26484-201ENSMUST00000158018 106 ntBASIC0.46□□□□□ -2.34
H2afb1S4R1E0 Mir7010-201ENSMUST00000183464 63 ntBASIC0.46□□□□□ -2.34
H2afb1S4R1E0 Mir7014-201ENSMUST00000183853 63 ntBASIC0.46□□□□□ -2.34
H2afb1S4R1E0 Gm25899-201ENSMUST00000082672 141 ntBASIC0.46□□□□□ -2.34
H2afb1S4R1E0 Snord64-201ENSMUST00000104003 67 ntBASIC0.45□□□□□ -2.34
H2afb1S4R1E0 Gm23482-201ENSMUST00000104172 122 ntBASIC0.45□□□□□ -2.34
H2afb1S4R1E0 Gm11694-201ENSMUST00000118637 159 ntBASIC0.45□□□□□ -2.34
H2afb1S4R1E0 Gm25056-201ENSMUST00000157372 62 ntBASIC0.45□□□□□ -2.34
H2afb1S4R1E0 Gm24524-201ENSMUST00000082925 170 ntBASIC0.45□□□□□ -2.34
H2afb1S4R1E0 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC0.45□□□□□ -2.34
H2afb1S4R1E0 Gm26301-201ENSMUST00000104813 95 ntBASIC0.44□□□□□ -2.34
H2afb1S4R1E0 Gm23986-201ENSMUST00000157144 63 ntBASIC0.44□□□□□ -2.34
H2afb1S4R1E0 Gm22011-201ENSMUST00000158790 123 ntBASIC0.44□□□□□ -2.34
H2afb1S4R1E0 AC124687.1-201ENSMUST00000221868 189 ntBASIC0.44□□□□□ -2.34
H2afb1S4R1E0 mt-Tt-201ENSMUST00000082422 67 ntBASIC0.44□□□□□ -2.34
H2afb1S4R1E0 Gm10813-201ENSMUST00000099936 90 ntBASIC0.44□□□□□ -2.34
H2afb1S4R1E0 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.44□□□□□ -2.34
H2afb1S4R1E0 Gm24649-201ENSMUST00000157106 134 ntBASIC0.43□□□□□ -2.34
H2afb1S4R1E0 Gm26369-201ENSMUST00000157825 100 ntBASIC0.43□□□□□ -2.34
H2afb1S4R1E0 Gm23350-201ENSMUST00000158429 103 ntBASIC0.43□□□□□ -2.34
H2afb1S4R1E0 Gm24323-201ENSMUST00000175342 77 ntBASIC0.43□□□□□ -2.34
H2afb1S4R1E0 Mir1949-202ENSMUST00000199259 70 ntBASIC0.43□□□□□ -2.34
H2afb1S4R1E0 Gm24920-201ENSMUST00000083018 85 ntBASIC0.43□□□□□ -2.34
H2afb1S4R1E0 Gm25393-201ENSMUST00000157336 285 ntBASIC0.42□□□□□ -2.34
H2afb1S4R1E0 Gm24129-201ENSMUST00000158537 97 ntBASIC0.42□□□□□ -2.34
H2afb1S4R1E0 Gm23384-201ENSMUST00000158593 103 ntBASIC0.42□□□□□ -2.34
H2afb1S4R1E0 Gm25974-201ENSMUST00000158701 94 ntBASIC0.42□□□□□ -2.34
H2afb1S4R1E0 Gm23966-201ENSMUST00000179823 107 ntBASIC0.42□□□□□ -2.34
H2afb1S4R1E0 Mir7009-201ENSMUST00000184519 64 ntBASIC0.42□□□□□ -2.34
H2afb1S4R1E0 Mir7229-201ENSMUST00000197062 53 ntBASIC0.42□□□□□ -2.34
H2afb1S4R1E0 Snora75-201ENSMUST00000082903 133 ntBASIC0.42□□□□□ -2.34
H2afb1S4R1E0 Gm23507-201ENSMUST00000083078 107 ntBASIC0.42□□□□□ -2.34
H2afb1S4R1E0 Gm22541-201ENSMUST00000158165 127 ntBASIC0.41□□□□□ -2.34
H2afb1S4R1E0 Gm24073-201ENSMUST00000158177 106 ntBASIC0.41□□□□□ -2.34
H2afb1S4R1E0 Gm24676-201ENSMUST00000158758 75 ntBASIC0.41□□□□□ -2.34
H2afb1S4R1E0 Gm24321-201ENSMUST00000175348 80 ntBASIC0.41□□□□□ -2.34
H2afb1S4R1E0 Gm26498-201ENSMUST00000177799 79 ntBASIC0.41□□□□□ -2.34
H2afb1S4R1E0 Gm26230-201ENSMUST00000180141 79 ntBASIC0.41□□□□□ -2.34
H2afb1S4R1E0 Gm43432-201ENSMUST00000196352 121 ntBASIC0.41□□□□□ -2.34
H2afb1S4R1E0 Gm44457-201ENSMUST00000198109 76 ntBASIC0.41□□□□□ -2.34
H2afb1S4R1E0 Gm45197-201ENSMUST00000205288 151 ntBASIC0.41□□□□□ -2.34
H2afb1S4R1E0 Gm26454-201ENSMUST00000082682 107 ntBASIC0.41□□□□□ -2.34
H2afb1S4R1E0 Gm25812-201ENSMUST00000082751 103 ntBASIC0.41□□□□□ -2.34
H2afb1S4R1E0 Gm45265-201ENSMUST00000210852 2497 ntBASIC0.41□□□□□ -2.34
H2afb1S4R1E0 Gm24009-201ENSMUST00000157734 93 ntBASIC0.4□□□□□ -2.35
H2afb1S4R1E0 Gm45541-201ENSMUST00000210443 54 ntBASIC0.4□□□□□ -2.35
H2afb1S4R1E0 Mir1a-1-201ENSMUST00000093635 77 ntBASIC0.4□□□□□ -2.35
H2afb1S4R1E0 Gm23065-201ENSMUST00000158236 130 ntBASIC0.39□□□□□ -2.35
H2afb1S4R1E0 Gm27656-201ENSMUST00000185055 80 ntBASIC0.39□□□□□ -2.35
H2afb1S4R1E0 Gm22031-201ENSMUST00000116945 126 ntBASIC0.38□□□□□ -2.35
H2afb1S4R1E0 Gm13065-201ENSMUST00000119178 141 ntBASIC0.38□□□□□ -2.35
H2afb1S4R1E0 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC0.38□□□□□ -2.35
H2afb1S4R1E0 Gm28270-201ENSMUST00000188550 109 ntBASIC0.38□□□□□ -2.35
H2afb1S4R1E0 Gm28328-201ENSMUST00000188869 109 ntBASIC0.38□□□□□ -2.35
H2afb1S4R1E0 Mir376b-201ENSMUST00000195930 82 ntBASIC0.38□□□□□ -2.35
H2afb1S4R1E0 Gm45429-201ENSMUST00000209527 172 ntBASIC0.38□□□□□ -2.35
H2afb1S4R1E0 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
H2afb1S4R1E0 Gm14400-201ENSMUST00000117234 2135 ntBASIC0.37□□□□□ -2.35
H2afb1S4R1E0 Gm23991-201ENSMUST00000117033 93 ntBASIC0.37□□□□□ -2.35
H2afb1S4R1E0 Gm22706-201ENSMUST00000157907 112 ntBASIC0.37□□□□□ -2.35
H2afb1S4R1E0 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC0.37□□□□□ -2.35
H2afb1S4R1E0 Mir216b-201ENSMUST00000102363 86 ntBASIC0.36□□□□□ -2.35
H2afb1S4R1E0 Gm25040-201ENSMUST00000103877 66 ntBASIC0.36□□□□□ -2.35
H2afb1S4R1E0 Gm26303-201ENSMUST00000116845 119 ntBASIC0.36□□□□□ -2.35
H2afb1S4R1E0 Gm23044-201ENSMUST00000157891 100 ntBASIC0.36□□□□□ -2.35
H2afb1S4R1E0 Gm22089-201ENSMUST00000158336 102 ntBASIC0.36□□□□□ -2.35
H2afb1S4R1E0 Gm22239-201ENSMUST00000175220 103 ntBASIC0.36□□□□□ -2.35
H2afb1S4R1E0 Mir6389-201ENSMUST00000183661 102 ntBASIC0.36□□□□□ -2.35
H2afb1S4R1E0 Gm26202-201ENSMUST00000082910 65 ntBASIC0.36□□□□□ -2.35
H2afb1S4R1E0 Mir200a-201ENSMUST00000083466 90 ntBASIC0.36□□□□□ -2.35
H2afb1S4R1E0 Mir448-201ENSMUST00000083516 112 ntBASIC0.36□□□□□ -2.35
H2afb1S4R1E0 Gm25006-201ENSMUST00000083813 107 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms