Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Gm27297-201ENSMUST00000183395 105 ntBASIC2.19□□□□□ -2.06
Nubp1Q9R060 Mir509-201ENSMUST00000196089 75 ntBASIC2.19□□□□□ -2.06
Nubp1Q9R060 Gm26207-201ENSMUST00000082909 104 ntBASIC2.19□□□□□ -2.06
Nubp1Q9R060 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC2.18□□□□□ -2.06
Nubp1Q9R060 Mir344e-201ENSMUST00000104677 66 ntBASIC2.18□□□□□ -2.06
Nubp1Q9R060 n-R5s70-201ENSMUST00000122650 116 ntBASIC2.18□□□□□ -2.06
Nubp1Q9R060 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Nubp1Q9R060 Gm24009-201ENSMUST00000157734 93 ntBASIC2.18□□□□□ -2.06
Nubp1Q9R060 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.18□□□□□ -2.06
Nubp1Q9R060 Mir322-201ENSMUST00000083484 95 ntBASIC2.18□□□□□ -2.06
Nubp1Q9R060 Gm10548-202ENSMUST00000165672 272 ntBASIC2.17□□□□□ -2.06
Nubp1Q9R060 Gm25870-201ENSMUST00000179845 79 ntBASIC2.17□□□□□ -2.06
Nubp1Q9R060 Mir7017-201ENSMUST00000184894 62 ntBASIC2.17□□□□□ -2.06
Nubp1Q9R060 Gm6293-201ENSMUST00000050339 195 ntBASIC2.17□□□□□ -2.06
Nubp1Q9R060 Gm26202-201ENSMUST00000082910 65 ntBASIC2.17□□□□□ -2.06
Nubp1Q9R060 Mir324-201ENSMUST00000083600 89 ntBASIC2.17□□□□□ -2.06
Nubp1Q9R060 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.16□□□□□ -2.06
Nubp1Q9R060 Mir6390-201ENSMUST00000184405 129 ntBASIC2.16□□□□□ -2.06
Nubp1Q9R060 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.16□□□□□ -2.06
Nubp1Q9R060 Gm44408-201ENSMUST00000200205 66 ntBASIC2.16□□□□□ -2.06
Nubp1Q9R060 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Nubp1Q9R060 Gm25068-201ENSMUST00000103895 110 ntBASIC2.15□□□□□ -2.07
Nubp1Q9R060 Gm23826-201ENSMUST00000157394 119 ntBASIC2.15□□□□□ -2.07
Nubp1Q9R060 Mir468-201ENSMUST00000197332 78 ntBASIC2.15□□□□□ -2.07
Nubp1Q9R060 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Nubp1Q9R060 Gm25110-201ENSMUST00000116684 121 ntBASIC2.14□□□□□ -2.07
Nubp1Q9R060 Gm25775-201ENSMUST00000116716 121 ntBASIC2.14□□□□□ -2.07
Nubp1Q9R060 Gm24795-201ENSMUST00000116737 121 ntBASIC2.14□□□□□ -2.07
Nubp1Q9R060 Gm25171-201ENSMUST00000116926 121 ntBASIC2.14□□□□□ -2.07
Nubp1Q9R060 Gm23857-201ENSMUST00000158379 111 ntBASIC2.14□□□□□ -2.07
Nubp1Q9R060 Gm22947-201ENSMUST00000158559 91 ntBASIC2.14□□□□□ -2.07
Nubp1Q9R060 Gm22862-201ENSMUST00000178593 121 ntBASIC2.14□□□□□ -2.07
Nubp1Q9R060 Gm26712-201ENSMUST00000180813 217 ntBASIC2.14□□□□□ -2.07
Nubp1Q9R060 Gm27993-201ENSMUST00000184362 85 ntBASIC2.14□□□□□ -2.07
Nubp1Q9R060 Gm24494-201ENSMUST00000083804 81 ntBASIC2.14□□□□□ -2.07
Nubp1Q9R060 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.13□□□□□ -2.07
Nubp1Q9R060 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Nubp1Q9R060 Gm24915-201ENSMUST00000157288 78 ntBASIC2.13□□□□□ -2.07
Nubp1Q9R060 Gm25600-201ENSMUST00000158357 106 ntBASIC2.13□□□□□ -2.07
Nubp1Q9R060 Gm24177-201ENSMUST00000158927 131 ntBASIC2.13□□□□□ -2.07
Nubp1Q9R060 Mir7225-201ENSMUST00000184178 54 ntBASIC2.13□□□□□ -2.07
Nubp1Q9R060 Gm36956-201ENSMUST00000193830 214 ntBASIC2.13□□□□□ -2.07
Nubp1Q9R060 Gm37579-201ENSMUST00000194291 142 ntBASIC2.13□□□□□ -2.07
Nubp1Q9R060 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Nubp1Q9R060 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.12□□□□□ -2.07
Nubp1Q9R060 Gm23950-201ENSMUST00000104026 129 ntBASIC2.12□□□□□ -2.07
Nubp1Q9R060 Snora36b-201ENSMUST00000104383 132 ntBASIC2.12□□□□□ -2.07
Nubp1Q9R060 Mir1961-201ENSMUST00000158643 112 ntBASIC2.12□□□□□ -2.07
Nubp1Q9R060 Mir6997-201ENSMUST00000184313 71 ntBASIC2.12□□□□□ -2.07
Nubp1Q9R060 CT025630.1-201ENSMUST00000227901 172 ntBASIC2.12□□□□□ -2.07
Nubp1Q9R060 Gm25402-201ENSMUST00000082966 131 ntBASIC2.12□□□□□ -2.07
Nubp1Q9R060 Gm23570-201ENSMUST00000083029 104 ntBASIC2.12□□□□□ -2.07
Nubp1Q9R060 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC2.12□□□□□ -2.07
Nubp1Q9R060 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
Nubp1Q9R060 Gm22785-201ENSMUST00000104087 132 ntBASIC2.11□□□□□ -2.07
Nubp1Q9R060 Gm24436-201ENSMUST00000157889 302 ntBASIC2.11□□□□□ -2.07
Nubp1Q9R060 Gm26089-201ENSMUST00000157898 107 ntBASIC2.11□□□□□ -2.07
Nubp1Q9R060 Gm24547-201ENSMUST00000158649 149 ntBASIC2.11□□□□□ -2.07
Nubp1Q9R060 Gm26158-201ENSMUST00000158973 119 ntBASIC2.11□□□□□ -2.07
Nubp1Q9R060 Gm22095-201ENSMUST00000158984 150 ntBASIC2.11□□□□□ -2.07
Nubp1Q9R060 Gm25950-201ENSMUST00000175331 100 ntBASIC2.11□□□□□ -2.07
Nubp1Q9R060 Gm43944-201ENSMUST00000205220 120 ntBASIC2.11□□□□□ -2.07
Nubp1Q9R060 Gm24406-201ENSMUST00000083026 128 ntBASIC2.11□□□□□ -2.07
Nubp1Q9R060 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Nubp1Q9R060 Gm15692-201ENSMUST00000152173 352 ntBASIC2.1□□□□□ -2.07
Nubp1Q9R060 Gm25974-201ENSMUST00000158701 94 ntBASIC2.1□□□□□ -2.07
Nubp1Q9R060 Gm25160-201ENSMUST00000158914 102 ntBASIC2.1□□□□□ -2.07
Nubp1Q9R060 Mir7026-201ENSMUST00000184384 67 ntBASIC2.1□□□□□ -2.07
Nubp1Q9R060 mt-Tl2-201ENSMUST00000082417 71 ntBASIC2.1□□□□□ -2.07
Nubp1Q9R060 Gm23376-201ENSMUST00000082938 160 ntBASIC2.1□□□□□ -2.07
Nubp1Q9R060 Gm22753-201ENSMUST00000083657 107 ntBASIC2.1□□□□□ -2.07
Nubp1Q9R060 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC2.09□□□□□ -2.07
Nubp1Q9R060 Gm26411-201ENSMUST00000157668 107 ntBASIC2.09□□□□□ -2.07
Nubp1Q9R060 Gm38295-201ENSMUST00000191951 151 ntBASIC2.09□□□□□ -2.07
Nubp1Q9R060 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.09□□□□□ -2.07
Nubp1Q9R060 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.09□□□□□ -2.07
Nubp1Q9R060 Gm25622-201ENSMUST00000157217 104 ntBASIC2.08□□□□□ -2.08
Nubp1Q9R060 Gm24476-201ENSMUST00000157437 131 ntBASIC2.08□□□□□ -2.08
Nubp1Q9R060 Gm22164-201ENSMUST00000158413 106 ntBASIC2.08□□□□□ -2.08
Nubp1Q9R060 Gm27898-201ENSMUST00000183987 80 ntBASIC2.08□□□□□ -2.08
Nubp1Q9R060 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Nubp1Q9R060 Gm44488-201ENSMUST00000199467 119 ntBASIC2.08□□□□□ -2.08
Nubp1Q9R060 Gm43927-201ENSMUST00000204599 117 ntBASIC2.08□□□□□ -2.08
Nubp1Q9R060 AC168062.3-201ENSMUST00000227025 165 ntBASIC2.08□□□□□ -2.08
Nubp1Q9R060 Gm22723-201ENSMUST00000083820 129 ntBASIC2.08□□□□□ -2.08
Nubp1Q9R060 Gm22752-201ENSMUST00000102083 109 ntBASIC2.07□□□□□ -2.08
Nubp1Q9R060 Gm25693-201ENSMUST00000175443 85 ntBASIC2.07□□□□□ -2.08
Nubp1Q9R060 Gm44384-201ENSMUST00000200208 114 ntBASIC2.07□□□□□ -2.08
Nubp1Q9R060 Mir7217-201ENSMUST00000200304 62 ntBASIC2.07□□□□□ -2.08
Nubp1Q9R060 Gm45654-201ENSMUST00000210980 123 ntBASIC2.07□□□□□ -2.08
Nubp1Q9R060 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC2.06□□□□□ -2.08
Nubp1Q9R060 Gm23010-201ENSMUST00000104151 126 ntBASIC2.06□□□□□ -2.08
Nubp1Q9R060 Gm25847-201ENSMUST00000116793 96 ntBASIC2.06□□□□□ -2.08
Nubp1Q9R060 Gm24290-201ENSMUST00000157634 96 ntBASIC2.06□□□□□ -2.08
Nubp1Q9R060 Gm24212-201ENSMUST00000158258 132 ntBASIC2.06□□□□□ -2.08
Nubp1Q9R060 Gm24677-201ENSMUST00000158755 150 ntBASIC2.06□□□□□ -2.08
Nubp1Q9R060 Gm26499-201ENSMUST00000178544 79 ntBASIC2.06□□□□□ -2.08
Nubp1Q9R060 Gm26096-201ENSMUST00000179084 79 ntBASIC2.06□□□□□ -2.08
Nubp1Q9R060 Gm24208-201ENSMUST00000082783 135 ntBASIC2.06□□□□□ -2.08
Nubp1Q9R060 Gm24918-201ENSMUST00000083022 130 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 168.8 ms