Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Gm24686-201ENSMUST00000157755 93 ntBASIC-2.59□□□□□ -2.82
Scn11aQ9R053 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC-2.59□□□□□ -2.82
Scn11aQ9R053 Gm10780-201ENSMUST00000099459 285 ntBASIC-2.59□□□□□ -2.82
Scn11aQ9R053 Gm23142-201ENSMUST00000101848 105 ntBASIC-2.59□□□□□ -2.82
Scn11aQ9R053 Gm26240-201ENSMUST00000101893 105 ntBASIC-2.59□□□□□ -2.82
Scn11aQ9R053 Gm26402-201ENSMUST00000158499 113 ntBASIC-2.59□□□□□ -2.82
Scn11aQ9R053 Gm37763-201ENSMUST00000193445 120 ntBASIC-2.59□□□□□ -2.82
Scn11aQ9R053 AL772265.1-201ENSMUST00000214379 305 ntBASIC-2.59□□□□□ -2.82
Scn11aQ9R053 Gm22186-201ENSMUST00000157822 122 ntBASIC-2.6□□□□□ -2.83
Scn11aQ9R053 Gm44923-201ENSMUST00000206673 85 ntBASIC-2.6□□□□□ -2.83
Scn11aQ9R053 Gm23567-201ENSMUST00000178005 107 ntBASIC-2.61□□□□□ -2.83
Scn11aQ9R053 Gm23982-201ENSMUST00000157141 106 ntBASIC-2.61□□□□□ -2.83
Scn11aQ9R053 Gm23261-201ENSMUST00000158316 136 ntBASIC-2.61□□□□□ -2.83
Scn11aQ9R053 AC122327.1-201ENSMUST00000220778 108 ntBASIC-2.61□□□□□ -2.83
Scn11aQ9R053 Gm24232-201ENSMUST00000104314 132 ntBASIC-2.62□□□□□ -2.83
Scn11aQ9R053 Gm22790-201ENSMUST00000157229 129 ntBASIC-2.62□□□□□ -2.83
Scn11aQ9R053 Gm22598-201ENSMUST00000157600 127 ntBASIC-2.62□□□□□ -2.83
Scn11aQ9R053 Gm25909-201ENSMUST00000157619 121 ntBASIC-2.62□□□□□ -2.83
Scn11aQ9R053 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC-2.62□□□□□ -2.83
Scn11aQ9R053 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC-2.63□□□□□ -2.83
Scn11aQ9R053 Mir496b-201ENSMUST00000184935 113 ntBASIC-2.64□□□□□ -2.83
Scn11aQ9R053 Gm24490-201ENSMUST00000083803 98 ntBASIC-2.64□□□□□ -2.83
Scn11aQ9R053 Gm22216-201ENSMUST00000157557 114 ntBASIC-2.64□□□□□ -2.83
Scn11aQ9R053 Gm22406-201ENSMUST00000174923 93 ntBASIC-2.64□□□□□ -2.83
Scn11aQ9R053 Gm25615-201ENSMUST00000177836 94 ntBASIC-2.64□□□□□ -2.83
Scn11aQ9R053 Mir1969-201ENSMUST00000157623 94 ntBASIC-2.65□□□□□ -2.83
Scn11aQ9R053 Gm26293-201ENSMUST00000104170 84 ntBASIC-2.66□□□□□ -2.83
Scn11aQ9R053 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC-2.66□□□□□ -2.83
Scn11aQ9R053 Gm25014-201ENSMUST00000158401 103 ntBASIC-2.66□□□□□ -2.83
Scn11aQ9R053 Gm22051-201ENSMUST00000117002 127 ntBASIC-2.66□□□□□ -2.84
Scn11aQ9R053 Gm26084-201ENSMUST00000157903 104 ntBASIC-2.66□□□□□ -2.84
Scn11aQ9R053 Gm24962-201ENSMUST00000157917 109 ntBASIC-2.66□□□□□ -2.84
Scn11aQ9R053 Gm22212-201ENSMUST00000158096 106 ntBASIC-2.66□□□□□ -2.84
Scn11aQ9R053 AC102369.1-201ENSMUST00000218415 373 ntBASIC-2.66□□□□□ -2.84
Scn11aQ9R053 Mir9-2-201ENSMUST00000083490 72 ntBASIC-2.66□□□□□ -2.84
Scn11aQ9R053 Gm26482-201ENSMUST00000158015 62 ntBASIC-2.67□□□□□ -2.84
Scn11aQ9R053 Gm25024-201ENSMUST00000179667 104 ntBASIC-2.67□□□□□ -2.84
Scn11aQ9R053 Gm23637-201ENSMUST00000175075 94 ntBASIC-2.68□□□□□ -2.84
Scn11aQ9R053 Gm27410-201ENSMUST00000183851 115 ntBASIC-2.68□□□□□ -2.84
Scn11aQ9R053 Gm23515-201ENSMUST00000082829 107 ntBASIC-2.68□□□□□ -2.84
Scn11aQ9R053 Gm24202-201ENSMUST00000082948 103 ntBASIC-2.68□□□□□ -2.84
Scn11aQ9R053 Mir764-201ENSMUST00000103259 108 ntBASIC-2.69□□□□□ -2.84
Scn11aQ9R053 Gm44959-201ENSMUST00000209127 231 ntBASIC-2.69□□□□□ -2.84
Scn11aQ9R053 Gm23474-201ENSMUST00000158884 75 ntBASIC-2.69□□□□□ -2.84
Scn11aQ9R053 AC159896.1-201ENSMUST00000215264 215 ntBASIC-2.69□□□□□ -2.84
Scn11aQ9R053 AC154390.1-201ENSMUST00000225629 277 ntBASIC-2.69□□□□□ -2.84
Scn11aQ9R053 Gm25684-201ENSMUST00000083941 107 ntBASIC-2.69□□□□□ -2.84
Scn11aQ9R053 Gm24717-201ENSMUST00000157522 124 ntBASIC-2.7□□□□□ -2.84
Scn11aQ9R053 Gm28849-201ENSMUST00000188127 174 ntBASIC-2.7□□□□□ -2.84
Scn11aQ9R053 Gm25859-201ENSMUST00000083710 91 ntBASIC-2.7□□□□□ -2.84
Scn11aQ9R053 Gm24399-201ENSMUST00000157869 74 ntBASIC-2.71□□□□□ -2.84
Scn11aQ9R053 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC-2.71□□□□□ -2.84
Scn11aQ9R053 Gm29665-201ENSMUST00000191457 528 ntBASIC-2.71□□□□□ -2.84
Scn11aQ9R053 Gm23500-201ENSMUST00000157735 98 ntBASIC-2.72□□□□□ -2.84
Scn11aQ9R053 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC-2.72□□□□□ -2.85
Scn11aQ9R053 Gm24775-201ENSMUST00000157377 99 ntBASIC-2.72□□□□□ -2.85
Scn11aQ9R053 Gm25267-201ENSMUST00000158522 63 ntBASIC-2.72□□□□□ -2.85
Scn11aQ9R053 Gm44377-201ENSMUST00000199039 87 ntBASIC-2.72□□□□□ -2.85
Scn11aQ9R053 Gm43976-201ENSMUST00000203637 235 ntBASIC-2.73□□□□□ -2.85
Scn11aQ9R053 Mir122-201ENSMUST00000083468 66 ntBASIC-2.73□□□□□ -2.85
Scn11aQ9R053 AC154213.2-201ENSMUST00000227138 187 ntBASIC-2.74□□□□□ -2.85
Scn11aQ9R053 Gm25131-201ENSMUST00000082653 151 ntBASIC-2.74□□□□□ -2.85
Scn11aQ9R053 Gm25634-201ENSMUST00000082667 105 ntBASIC-2.74□□□□□ -2.85
Scn11aQ9R053 Rny3-201ENSMUST00000083011 102 ntBASIC-2.74□□□□□ -2.85
Scn11aQ9R053 Gm14574-201ENSMUST00000120644 279 ntBASIC-2.74□□□□□ -2.85
Scn11aQ9R053 Gm16362-201ENSMUST00000135189 214 ntBASIC-2.74□□□□□ -2.85
Scn11aQ9R053 Gm22571-201ENSMUST00000082984 70 ntBASIC-2.74□□□□□ -2.85
Scn11aQ9R053 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC-2.75□□□□□ -2.85
Scn11aQ9R053 Gm25619-201ENSMUST00000122621 104 ntBASIC-2.75□□□□□ -2.85
Scn11aQ9R053 Gm24204-201ENSMUST00000082950 107 ntBASIC-2.75□□□□□ -2.85
Scn11aQ9R053 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC-2.76□□□□□ -2.85
Scn11aQ9R053 Gm26160-201ENSMUST00000158965 63 ntBASIC-2.76□□□□□ -2.85
Scn11aQ9R053 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC-2.76□□□□□ -2.85
Scn11aQ9R053 Mir466b-7-201ENSMUST00000103804 88 ntBASIC-2.77□□□□□ -2.85
Scn11aQ9R053 Mir466b-5-201ENSMUST00000103900 88 ntBASIC-2.77□□□□□ -2.85
Scn11aQ9R053 Gm6897-201ENSMUST00000117714 138 ntBASIC-2.77□□□□□ -2.85
Scn11aQ9R053 Gm14758-201ENSMUST00000119104 138 ntBASIC-2.77□□□□□ -2.85
Scn11aQ9R053 Gm25899-201ENSMUST00000082672 141 ntBASIC-2.77□□□□□ -2.85
Scn11aQ9R053 Mir465c-2-201ENSMUST00000104757 81 ntBASIC-2.77□□□□□ -2.85
Scn11aQ9R053 Mir21c-201ENSMUST00000184910 78 ntBASIC-2.77□□□□□ -2.85
Scn11aQ9R053 Mir3535-201ENSMUST00000197651 147 ntBASIC-2.77□□□□□ -2.85
Scn11aQ9R053 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC-2.77□□□□□ -2.85
Scn11aQ9R053 Mir465c-1-201ENSMUST00000093560 81 ntBASIC-2.77□□□□□ -2.85
Scn11aQ9R053 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC-2.78□□□□□ -2.85
Scn11aQ9R053 Gm27699-201ENSMUST00000183553 180 ntBASIC-2.78□□□□□ -2.85
Scn11aQ9R053 Gm43324-201ENSMUST00000197482 289 ntBASIC-2.78□□□□□ -2.85
Scn11aQ9R053 Gm44351-201ENSMUST00000200090 95 ntBASIC-2.78□□□□□ -2.85
Scn11aQ9R053 Mir494-201ENSMUST00000093632 85 ntBASIC-2.79□□□□□ -2.86
Scn11aQ9R053 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC-2.79□□□□□ -2.86
Scn11aQ9R053 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC-2.79□□□□□ -2.86
Scn11aQ9R053 Gm22733-201ENSMUST00000158094 91 ntBASIC-2.79□□□□□ -2.86
Scn11aQ9R053 Gm23660-201ENSMUST00000178362 79 ntBASIC-2.79□□□□□ -2.86
Scn11aQ9R053 Gm24088-201ENSMUST00000179100 79 ntBASIC-2.79□□□□□ -2.86
Scn11aQ9R053 Gm29818-201ENSMUST00000218070 165 ntBASIC-2.79□□□□□ -2.86
Scn11aQ9R053 Gm9973-202ENSMUST00000220926 166 ntBASIC-2.79□□□□□ -2.86
Scn11aQ9R053 Gm22591-201ENSMUST00000104243 106 ntBASIC-2.8□□□□□ -2.86
Scn11aQ9R053 Gm11204-201ENSMUST00000122438 147 ntBASIC-2.8□□□□□ -2.86
Scn11aQ9R053 Mir509-201ENSMUST00000196089 75 ntBASIC-2.8□□□□□ -2.86
Scn11aQ9R053 Gm24374-201ENSMUST00000104394 106 ntBASIC-2.81□□□□□ -2.86
Scn11aQ9R053 Gm23320-201ENSMUST00000104462 127 ntBASIC-2.81□□□□□ -2.86
Retrieved 100 of 76,532 protein–RNA pairs in 157.5 ms