Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm24793-201ENSMUST00000104289 132 ntBASIC-0.49□□□□□ -2.49
Trem1Q9JKE2 Gm11694-201ENSMUST00000118637 159 ntBASIC-0.49□□□□□ -2.49
Trem1Q9JKE2 Gm24843-201ENSMUST00000158682 76 ntBASIC-0.49□□□□□ -2.49
Trem1Q9JKE2 Gm25797-201ENSMUST00000082640 107 ntBASIC-0.49□□□□□ -2.49
Trem1Q9JKE2 Mir302d-201ENSMUST00000083513 66 ntBASIC-0.49□□□□□ -2.49
Trem1Q9JKE2 Gm26712-201ENSMUST00000180813 217 ntBASIC-0.5□□□□□ -2.49
Trem1Q9JKE2 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC-0.5□□□□□ -2.49
Trem1Q9JKE2 Gm23654-201ENSMUST00000116758 126 ntBASIC-0.51□□□□□ -2.49
Trem1Q9JKE2 Gm24467-201ENSMUST00000157887 126 ntBASIC-0.51□□□□□ -2.49
Trem1Q9JKE2 Gm26007-201ENSMUST00000158798 120 ntBASIC-0.51□□□□□ -2.49
Trem1Q9JKE2 AC124739.2-201ENSMUST00000222201 109 ntBASIC-0.51□□□□□ -2.49
Trem1Q9JKE2 AC125190.3-201ENSMUST00000223224 121 ntBASIC-0.51□□□□□ -2.49
Trem1Q9JKE2 Gm25135-201ENSMUST00000082648 143 ntBASIC-0.51□□□□□ -2.49
Trem1Q9JKE2 Gm23347-201ENSMUST00000083823 82 ntBASIC-0.51□□□□□ -2.49
Trem1Q9JKE2 Gm25654-201ENSMUST00000158467 88 ntBASIC-0.52□□□□□ -2.49
Trem1Q9JKE2 Gm25160-201ENSMUST00000158914 102 ntBASIC-0.52□□□□□ -2.49
Trem1Q9JKE2 Gm27792-201ENSMUST00000184031 115 ntBASIC-0.52□□□□□ -2.49
Trem1Q9JKE2 Mir7038-201ENSMUST00000184833 71 ntBASIC-0.52□□□□□ -2.49
Trem1Q9JKE2 AL606472.1-201ENSMUST00000224628 275 ntBASIC-0.52□□□□□ -2.49
Trem1Q9JKE2 Gm23690-201ENSMUST00000083036 94 ntBASIC-0.52□□□□□ -2.49
Trem1Q9JKE2 Gm23012-201ENSMUST00000104149 83 ntBASIC-0.53□□□□□ -2.49
Trem1Q9JKE2 Gm13339-201ENSMUST00000120651 510 ntBASIC-0.53□□□□□ -2.49
Trem1Q9JKE2 Gm25749-201ENSMUST00000175485 111 ntBASIC-0.53□□□□□ -2.49
Trem1Q9JKE2 AC109214.2-201ENSMUST00000220089 358 ntBASIC-0.53□□□□□ -2.49
Trem1Q9JKE2 mt-Ta-201ENSMUST00000082398 69 ntBASIC-0.53□□□□□ -2.49
Trem1Q9JKE2 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC-0.54□□□□□ -2.5
Trem1Q9JKE2 Gm22148-201ENSMUST00000104445 107 ntBASIC-0.54□□□□□ -2.5
Trem1Q9JKE2 Gm25184-201ENSMUST00000157753 163 ntBASIC-0.54□□□□□ -2.5
Trem1Q9JKE2 Gm23545-201ENSMUST00000158205 104 ntBASIC-0.54□□□□□ -2.5
Trem1Q9JKE2 Gm25366-201ENSMUST00000158845 124 ntBASIC-0.54□□□□□ -2.5
Trem1Q9JKE2 Gm22476-201ENSMUST00000158902 100 ntBASIC-0.54□□□□□ -2.5
Trem1Q9JKE2 Gm24823-201ENSMUST00000175092 91 ntBASIC-0.54□□□□□ -2.5
Trem1Q9JKE2 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC-0.54□□□□□ -2.5
Trem1Q9JKE2 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC-0.54□□□□□ -2.5
Trem1Q9JKE2 Snora16a-202ENSMUST00000196061 137 ntBASIC-0.54□□□□□ -2.5
Trem1Q9JKE2 AC124687.1-201ENSMUST00000221868 189 ntBASIC-0.54□□□□□ -2.5
Trem1Q9JKE2 Gm25802-201ENSMUST00000082639 77 ntBASIC-0.54□□□□□ -2.5
Trem1Q9JKE2 Snord61-201ENSMUST00000083176 71 ntBASIC-0.54□□□□□ -2.5
Trem1Q9JKE2 Gm28925-201ENSMUST00000188586 168 ntBASIC-0.55□□□□□ -2.5
Trem1Q9JKE2 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC-0.56□□□□□ -2.5
Trem1Q9JKE2 Gm44489-201ENSMUST00000104619 97 ntBASIC-0.56□□□□□ -2.5
Trem1Q9JKE2 Gm24724-201ENSMUST00000158230 107 ntBASIC-0.56□□□□□ -2.5
Trem1Q9JKE2 Snora15-201ENSMUST00000177461 131 ntBASIC-0.56□□□□□ -2.5
Trem1Q9JKE2 Gm23141-201ENSMUST00000178682 94 ntBASIC-0.56□□□□□ -2.5
Trem1Q9JKE2 Mir7651-201ENSMUST00000184154 64 ntBASIC-0.56□□□□□ -2.5
Trem1Q9JKE2 Gm42623-201ENSMUST00000197225 379 ntBASIC-0.56□□□□□ -2.5
Trem1Q9JKE2 Gm24868-201ENSMUST00000157265 136 ntBASIC-0.57□□□□□ -2.5
Trem1Q9JKE2 Gm24077-201ENSMUST00000158183 136 ntBASIC-0.57□□□□□ -2.5
Trem1Q9JKE2 n-R5s96-201ENSMUST00000082574 124 ntBASIC-0.57□□□□□ -2.5
Trem1Q9JKE2 Mir488-201ENSMUST00000093595 109 ntBASIC-0.57□□□□□ -2.5
Trem1Q9JKE2 Gm24232-201ENSMUST00000104314 132 ntBASIC-0.58□□□□□ -2.5
Trem1Q9JKE2 Gm25497-201ENSMUST00000104425 132 ntBASIC-0.58□□□□□ -2.5
Trem1Q9JKE2 Gm25390-201ENSMUST00000157341 103 ntBASIC-0.58□□□□□ -2.5
Trem1Q9JKE2 AC154245.1-201ENSMUST00000224615 601 ntBASIC-0.58□□□□□ -2.5
Trem1Q9JKE2 Gm23483-201ENSMUST00000104179 108 ntBASIC-0.59□□□□□ -2.5
Trem1Q9JKE2 Gm24132-201ENSMUST00000104745 91 ntBASIC-0.59□□□□□ -2.5
Trem1Q9JKE2 Mir1a-2-201ENSMUST00000198520 72 ntBASIC-0.59□□□□□ -2.5
Trem1Q9JKE2 Gm44490-201ENSMUST00000198566 127 ntBASIC-0.59□□□□□ -2.5
Trem1Q9JKE2 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC-0.59□□□□□ -2.5
Trem1Q9JKE2 Gm25772-201ENSMUST00000158574 56 ntBASIC-0.6□□□□□ -2.51
Trem1Q9JKE2 Gm43907-201ENSMUST00000203128 117 ntBASIC-0.6□□□□□ -2.51
Trem1Q9JKE2 Gm23987-201ENSMUST00000117039 129 ntBASIC-0.61□□□□□ -2.51
Trem1Q9JKE2 Snord2-201ENSMUST00000157899 69 ntBASIC-0.61□□□□□ -2.51
Trem1Q9JKE2 Gm25834-201ENSMUST00000158916 101 ntBASIC-0.61□□□□□ -2.51
Trem1Q9JKE2 Gm27803-201ENSMUST00000183763 119 ntBASIC-0.61□□□□□ -2.51
Trem1Q9JKE2 Mir141-201ENSMUST00000083540 72 ntBASIC-0.61□□□□□ -2.51
Trem1Q9JKE2 Mir764-201ENSMUST00000103259 108 ntBASIC-0.62□□□□□ -2.51
Trem1Q9JKE2 Snord67-201ENSMUST00000104033 111 ntBASIC-0.62□□□□□ -2.51
Trem1Q9JKE2 Gm26081-201ENSMUST00000104068 132 ntBASIC-0.62□□□□□ -2.51
Trem1Q9JKE2 Gm11936-201ENSMUST00000118323 160 ntBASIC-0.62□□□□□ -2.51
Trem1Q9JKE2 Gm25985-201ENSMUST00000122677 107 ntBASIC-0.62□□□□□ -2.51
Trem1Q9JKE2 Gm22542-201ENSMUST00000158166 95 ntBASIC-0.62□□□□□ -2.51
Trem1Q9JKE2 Gm25249-201ENSMUST00000175471 78 ntBASIC-0.62□□□□□ -2.51
Trem1Q9JKE2 Gm38295-201ENSMUST00000191951 151 ntBASIC-0.62□□□□□ -2.51
Trem1Q9JKE2 Gm24524-201ENSMUST00000082925 170 ntBASIC-0.62□□□□□ -2.51
Trem1Q9JKE2 Mir669a-7-201ENSMUST00000180364 87 ntBASIC-0.63□□□□□ -2.51
Trem1Q9JKE2 Mir669a-6-201ENSMUST00000196127 87 ntBASIC-0.63□□□□□ -2.51
Trem1Q9JKE2 Mir669a-12-201ENSMUST00000197274 87 ntBASIC-0.63□□□□□ -2.51
Trem1Q9JKE2 Mir669a-5-201ENSMUST00000197439 87 ntBASIC-0.63□□□□□ -2.51
Trem1Q9JKE2 Mir669a-10-201ENSMUST00000197745 87 ntBASIC-0.63□□□□□ -2.51
Trem1Q9JKE2 Mir669a-11-201ENSMUST00000197952 87 ntBASIC-0.63□□□□□ -2.51
Trem1Q9JKE2 Mir669a-4-201ENSMUST00000198665 87 ntBASIC-0.63□□□□□ -2.51
Trem1Q9JKE2 Mir669a-9-201ENSMUST00000200087 87 ntBASIC-0.63□□□□□ -2.51
Trem1Q9JKE2 Mir669a-8-201ENSMUST00000200268 87 ntBASIC-0.63□□□□□ -2.51
Trem1Q9JKE2 Gm23303-201ENSMUST00000082714 152 ntBASIC-0.63□□□□□ -2.51
Trem1Q9JKE2 Gm27579-201ENSMUST00000158113 63 ntBASIC-0.64□□□□□ -2.51
Trem1Q9JKE2 Traj61-201ENSMUST00000165025 72 ntBASIC-0.64□□□□□ -2.51
Trem1Q9JKE2 Mir183-201ENSMUST00000083685 70 ntBASIC-0.64□□□□□ -2.51
Trem1Q9JKE2 Mir466f-2-201ENSMUST00000104805 94 ntBASIC-0.65□□□□□ -2.51
Trem1Q9JKE2 Gm11116-201ENSMUST00000113257 54 ntAPPRIS P1 TSL 5 BASIC-0.65□□□□□ -2.51
Trem1Q9JKE2 Gm14001-201ENSMUST00000118847 247 ntBASIC-0.65□□□□□ -2.51
Trem1Q9JKE2 Gm14838-201ENSMUST00000118913 248 ntBASIC-0.65□□□□□ -2.51
Trem1Q9JKE2 Ighv15-1-201ENSMUST00000194450 276 ntBASIC-0.65□□□□□ -2.51
Trem1Q9JKE2 mt-Tl1-201ENSMUST00000082391 75 ntBASIC-0.65□□□□□ -2.51
Trem1Q9JKE2 Snord49b-201ENSMUST00000082503 72 ntBASIC-0.65□□□□□ -2.51
Trem1Q9JKE2 Mir103-1-201ENSMUST00000083619 86 ntBASIC-0.65□□□□□ -2.51
Trem1Q9JKE2 Gm24374-201ENSMUST00000104394 106 ntBASIC-0.66□□□□□ -2.52
Trem1Q9JKE2 Gm25055-201ENSMUST00000157369 76 ntBASIC-0.66□□□□□ -2.52
Trem1Q9JKE2 Gm25993-201ENSMUST00000175391 80 ntBASIC-0.66□□□□□ -2.52
Trem1Q9JKE2 Gm25596-201ENSMUST00000178368 107 ntBASIC-0.66□□□□□ -2.52
Retrieved 100 of 76,532 protein–RNA pairs in 297.5 ms