Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.76□□□□□ -2.29
Trim54Q9ERP3 Gm10548-202ENSMUST00000165672 272 ntBASIC0.76□□□□□ -2.29
Trim54Q9ERP3 Gm20386-201ENSMUST00000174010 132 ntBASIC0.76□□□□□ -2.29
Trim54Q9ERP3 Gm25071-201ENSMUST00000175232 70 ntBASIC0.76□□□□□ -2.29
Trim54Q9ERP3 Mir219b-201ENSMUST00000198317 65 ntBASIC0.76□□□□□ -2.29
Trim54Q9ERP3 Gm25091-201ENSMUST00000103997 71 ntBASIC0.75□□□□□ -2.29
Trim54Q9ERP3 Gm25378-201ENSMUST00000104333 129 ntBASIC0.75□□□□□ -2.29
Trim54Q9ERP3 Gm23651-201ENSMUST00000116755 120 ntBASIC0.75□□□□□ -2.29
Trim54Q9ERP3 Gm23989-201ENSMUST00000117030 66 ntBASIC0.75□□□□□ -2.29
Trim54Q9ERP3 Gm26158-201ENSMUST00000158973 119 ntBASIC0.75□□□□□ -2.29
Trim54Q9ERP3 Traj61-201ENSMUST00000165025 72 ntBASIC0.75□□□□□ -2.29
Trim54Q9ERP3 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC0.75□□□□□ -2.29
Trim54Q9ERP3 Gm23922-201ENSMUST00000178792 79 ntBASIC0.75□□□□□ -2.29
Trim54Q9ERP3 Gm24657-201ENSMUST00000180085 79 ntBASIC0.75□□□□□ -2.29
Trim54Q9ERP3 Gm22996-201ENSMUST00000180236 79 ntBASIC0.75□□□□□ -2.29
Trim54Q9ERP3 Gm22842-201ENSMUST00000157709 118 ntBASIC0.74□□□□□ -2.29
Trim54Q9ERP3 Mir100-201ENSMUST00000175270 80 ntBASIC0.74□□□□□ -2.29
Trim54Q9ERP3 Gm38113-201ENSMUST00000193704 201 ntBASIC0.74□□□□□ -2.29
Trim54Q9ERP3 Gm24449-201ENSMUST00000083985 106 ntBASIC0.74□□□□□ -2.29
Trim54Q9ERP3 Gm6985-201ENSMUST00000121255 271 ntBASIC0.73□□□□□ -2.29
Trim54Q9ERP3 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC0.73□□□□□ -2.29
Trim54Q9ERP3 Gm23857-201ENSMUST00000158379 111 ntBASIC0.73□□□□□ -2.29
Trim54Q9ERP3 Gm26290-201ENSMUST00000158891 145 ntBASIC0.73□□□□□ -2.29
Trim54Q9ERP3 AC126939.1-201ENSMUST00000224943 226 ntBASIC0.73□□□□□ -2.29
Trim54Q9ERP3 Gm10351-201ENSMUST00000087694 125 ntBASIC0.73□□□□□ -2.29
Trim54Q9ERP3 Gm24555-201ENSMUST00000104548 124 ntBASIC0.72□□□□□ -2.29
Trim54Q9ERP3 Gm23917-201ENSMUST00000175256 98 ntBASIC0.72□□□□□ -2.29
Trim54Q9ERP3 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.72□□□□□ -2.29
Trim54Q9ERP3 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.72□□□□□ -2.29
Trim54Q9ERP3 Gm23708-201ENSMUST00000104367 123 ntBASIC0.71□□□□□ -2.3
Trim54Q9ERP3 Gm16186-201ENSMUST00000120132 216 ntBASIC0.71□□□□□ -2.3
Trim54Q9ERP3 Gm24500-201ENSMUST00000158447 124 ntBASIC0.71□□□□□ -2.3
Trim54Q9ERP3 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.71□□□□□ -2.3
Trim54Q9ERP3 Gm23678-201ENSMUST00000083157 107 ntBASIC0.71□□□□□ -2.3
Trim54Q9ERP3 Gm25693-201ENSMUST00000175443 85 ntBASIC0.7□□□□□ -2.3
Trim54Q9ERP3 Mir7010-201ENSMUST00000183464 63 ntBASIC0.7□□□□□ -2.3
Trim54Q9ERP3 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
Trim54Q9ERP3 AC164561.1-201ENSMUST00000220414 115 ntBASIC0.7□□□□□ -2.3
Trim54Q9ERP3 mt-Ts2-201ENSMUST00000082416 59 ntBASIC0.7□□□□□ -2.3
Trim54Q9ERP3 Gm25623-201ENSMUST00000157216 108 ntBASIC0.69□□□□□ -2.3
Trim54Q9ERP3 Gm24913-201ENSMUST00000157286 107 ntBASIC0.69□□□□□ -2.3
Trim54Q9ERP3 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.69□□□□□ -2.3
Trim54Q9ERP3 Gm25300-201ENSMUST00000175284 84 ntBASIC0.69□□□□□ -2.3
Trim54Q9ERP3 Gm16265-201ENSMUST00000134558 108 ntBASIC0.68□□□□□ -2.3
Trim54Q9ERP3 Gm23605-201ENSMUST00000157255 127 ntBASIC0.68□□□□□ -2.3
Trim54Q9ERP3 Gm22708-201ENSMUST00000158987 103 ntBASIC0.68□□□□□ -2.3
Trim54Q9ERP3 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.68□□□□□ -2.3
Trim54Q9ERP3 Gm26168-201ENSMUST00000083787 112 ntBASIC0.68□□□□□ -2.3
Trim54Q9ERP3 Gm24290-201ENSMUST00000157634 96 ntBASIC0.67□□□□□ -2.3
Trim54Q9ERP3 Gm22541-201ENSMUST00000158165 127 ntBASIC0.67□□□□□ -2.3
Trim54Q9ERP3 Gm22431-201ENSMUST00000158545 107 ntBASIC0.67□□□□□ -2.3
Trim54Q9ERP3 Gm27289-201ENSMUST00000183341 82 ntBASIC0.67□□□□□ -2.3
Trim54Q9ERP3 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC0.67□□□□□ -2.3
Trim54Q9ERP3 Mir377-201ENSMUST00000083504 68 ntBASIC0.67□□□□□ -2.3
Trim54Q9ERP3 Gm24258-201ENSMUST00000083739 133 ntBASIC0.67□□□□□ -2.3
Trim54Q9ERP3 Gm25629-201ENSMUST00000084001 107 ntBASIC0.67□□□□□ -2.3
Trim54Q9ERP3 Gm12013-201ENSMUST00000121971 155 ntBASIC0.66□□□□□ -2.3
Trim54Q9ERP3 Gm22384-201ENSMUST00000158187 104 ntBASIC0.66□□□□□ -2.3
Trim54Q9ERP3 Gm25247-201ENSMUST00000175475 90 ntBASIC0.66□□□□□ -2.3
Trim54Q9ERP3 Mir21c-201ENSMUST00000184910 78 ntBASIC0.66□□□□□ -2.3
Trim54Q9ERP3 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.66□□□□□ -2.3
Trim54Q9ERP3 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.66□□□□□ -2.3
Trim54Q9ERP3 Gm26421-201ENSMUST00000104279 132 ntBASIC0.65□□□□□ -2.31
Trim54Q9ERP3 Gm26236-201ENSMUST00000175536 137 ntBASIC0.65□□□□□ -2.31
Trim54Q9ERP3 Gm27851-201ENSMUST00000183529 63 ntBASIC0.65□□□□□ -2.31
Trim54Q9ERP3 Gm10813-201ENSMUST00000099936 90 ntBASIC0.65□□□□□ -2.31
Trim54Q9ERP3 Gm22030-201ENSMUST00000116942 63 ntBASIC0.64□□□□□ -2.31
Trim54Q9ERP3 Gm25600-201ENSMUST00000158357 106 ntBASIC0.64□□□□□ -2.31
Trim54Q9ERP3 Gm23350-201ENSMUST00000158429 103 ntBASIC0.64□□□□□ -2.31
Trim54Q9ERP3 Gm24772-201ENSMUST00000158507 110 ntBASIC0.64□□□□□ -2.31
Trim54Q9ERP3 Gm24129-201ENSMUST00000158537 97 ntBASIC0.64□□□□□ -2.31
Trim54Q9ERP3 Gm24842-201ENSMUST00000158681 54 ntBASIC0.64□□□□□ -2.31
Trim54Q9ERP3 Gm8034-201ENSMUST00000178853 132 ntBASIC0.64□□□□□ -2.31
Trim54Q9ERP3 Gm22297-201ENSMUST00000083312 106 ntBASIC0.64□□□□□ -2.31
Trim54Q9ERP3 n-R5s39-201ENSMUST00000122613 108 ntBASIC0.63□□□□□ -2.31
Trim54Q9ERP3 Gm22522-201ENSMUST00000158271 151 ntBASIC0.63□□□□□ -2.31
Trim54Q9ERP3 Gm26285-201ENSMUST00000177923 107 ntBASIC0.63□□□□□ -2.31
Trim54Q9ERP3 Gm27607-201ENSMUST00000185162 122 ntBASIC0.63□□□□□ -2.31
Trim54Q9ERP3 mt-Tt-201ENSMUST00000082422 67 ntBASIC0.63□□□□□ -2.31
Trim54Q9ERP3 Gm23622-201ENSMUST00000082460 107 ntBASIC0.63□□□□□ -2.31
Trim54Q9ERP3 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC0.62□□□□□ -2.31
Trim54Q9ERP3 Gm25375-201ENSMUST00000158157 135 ntBASIC0.62□□□□□ -2.31
Trim54Q9ERP3 Gm38298-201ENSMUST00000193578 118 ntBASIC0.62□□□□□ -2.31
Trim54Q9ERP3 AC124687.1-201ENSMUST00000221868 189 ntBASIC0.62□□□□□ -2.31
Trim54Q9ERP3 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
Trim54Q9ERP3 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC0.61□□□□□ -2.31
Trim54Q9ERP3 Gm25680-201ENSMUST00000116917 126 ntBASIC0.61□□□□□ -2.31
Trim54Q9ERP3 Gm22635-201ENSMUST00000116962 126 ntBASIC0.61□□□□□ -2.31
Trim54Q9ERP3 Gm14884-201ENSMUST00000120456 196 ntBASIC0.61□□□□□ -2.31
Trim54Q9ERP3 Mir6389-201ENSMUST00000183661 102 ntBASIC0.61□□□□□ -2.31
Trim54Q9ERP3 Mir6342-201ENSMUST00000183870 125 ntBASIC0.61□□□□□ -2.31
Trim54Q9ERP3 Mir216a-201ENSMUST00000083605 72 ntBASIC0.61□□□□□ -2.31
Trim54Q9ERP3 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC0.61□□□□□ -2.31
Trim54Q9ERP3 Gm22196-201ENSMUST00000116865 109 ntBASIC0.6□□□□□ -2.31
Trim54Q9ERP3 Gm25633-201ENSMUST00000178565 107 ntBASIC0.6□□□□□ -2.31
Trim54Q9ERP3 Gm29535-201ENSMUST00000185723 109 ntBASIC0.6□□□□□ -2.31
Trim54Q9ERP3 Gm28143-201ENSMUST00000191082 109 ntBASIC0.6□□□□□ -2.31
Trim54Q9ERP3 Mir764-201ENSMUST00000103259 108 ntBASIC0.59□□□□□ -2.31
Trim54Q9ERP3 Gm26484-201ENSMUST00000158018 106 ntBASIC0.59□□□□□ -2.31
Trim54Q9ERP3 Gm22520-201ENSMUST00000158269 129 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 148.9 ms