Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm26398-201ENSMUST00000179015 127 ntBASIC-0.47□□□□□ -2.48
Lima1Q9ERG0 AL603630.1-201ENSMUST00000214781 147 ntBASIC-0.47□□□□□ -2.48
Lima1Q9ERG0 Mir363-201ENSMUST00000093598 75 ntBASIC-0.47□□□□□ -2.48
Lima1Q9ERG0 Gm23661-201ENSMUST00000122630 87 ntBASIC-0.48□□□□□ -2.49
Lima1Q9ERG0 Gm22966-201ENSMUST00000157957 129 ntBASIC-0.48□□□□□ -2.49
Lima1Q9ERG0 Gm25032-201ENSMUST00000175411 84 ntBASIC-0.48□□□□□ -2.49
Lima1Q9ERG0 Gm27297-201ENSMUST00000183395 105 ntBASIC-0.48□□□□□ -2.49
Lima1Q9ERG0 Gm37750-201ENSMUST00000193563 129 ntBASIC-0.48□□□□□ -2.49
Lima1Q9ERG0 Gm22287-201ENSMUST00000083197 107 ntBASIC-0.48□□□□□ -2.49
Lima1Q9ERG0 Gm22744-201ENSMUST00000083444 65 ntBASIC-0.48□□□□□ -2.49
Lima1Q9ERG0 AC154506.4-201ENSMUST00000224898 3416 ntBASIC-0.49□□□□□ -2.49
Lima1Q9ERG0 Gm25056-201ENSMUST00000157372 62 ntBASIC-0.49□□□□□ -2.49
Lima1Q9ERG0 Mir3094-201ENSMUST00000175121 64 ntBASIC-0.49□□□□□ -2.49
Lima1Q9ERG0 Gm25629-201ENSMUST00000084001 107 ntBASIC-0.49□□□□□ -2.49
Lima1Q9ERG0 Gm14502-201ENSMUST00000118154 113 ntBASIC-0.5□□□□□ -2.49
Lima1Q9ERG0 Gm23080-201ENSMUST00000157846 103 ntBASIC-0.5□□□□□ -2.49
Lima1Q9ERG0 Gm22788-201ENSMUST00000157876 61 ntBASIC-0.5□□□□□ -2.49
Lima1Q9ERG0 Gm23892-201ENSMUST00000158105 130 ntBASIC-0.5□□□□□ -2.49
Lima1Q9ERG0 Gm27934-201ENSMUST00000158795 63 ntBASIC-0.5□□□□□ -2.49
Lima1Q9ERG0 Gm23442-201ENSMUST00000082919 134 ntBASIC-0.5□□□□□ -2.49
Lima1Q9ERG0 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC-0.51□□□□□ -2.49
Lima1Q9ERG0 Gm14947-201ENSMUST00000133704 303 ntBASIC-0.51□□□□□ -2.49
Lima1Q9ERG0 Gm24009-201ENSMUST00000157734 93 ntBASIC-0.51□□□□□ -2.49
Lima1Q9ERG0 Gm25328-201ENSMUST00000175013 107 ntBASIC-0.51□□□□□ -2.49
Lima1Q9ERG0 Mir344-2-201ENSMUST00000175446 80 ntBASIC-0.51□□□□□ -2.49
Lima1Q9ERG0 AC153646.2-201ENSMUST00000220516 109 ntBASIC-0.51□□□□□ -2.49
Lima1Q9ERG0 AC122320.1-201ENSMUST00000227233 105 ntBASIC-0.51□□□□□ -2.49
Lima1Q9ERG0 Gm25108-201ENSMUST00000122473 78 ntBASIC-0.52□□□□□ -2.49
Lima1Q9ERG0 Gm22675-201ENSMUST00000158430 104 ntBASIC-0.52□□□□□ -2.49
Lima1Q9ERG0 Mir302d-201ENSMUST00000083513 66 ntBASIC-0.52□□□□□ -2.49
Lima1Q9ERG0 Mir145a-201ENSMUST00000083658 70 ntBASIC-0.52□□□□□ -2.49
Lima1Q9ERG0 Gm26011-201ENSMUST00000104410 104 ntBASIC-0.53□□□□□ -2.49
Lima1Q9ERG0 Gm11694-201ENSMUST00000118637 159 ntBASIC-0.53□□□□□ -2.49
Lima1Q9ERG0 Gm25654-201ENSMUST00000158467 88 ntBASIC-0.53□□□□□ -2.49
Lima1Q9ERG0 Gm24843-201ENSMUST00000158682 76 ntBASIC-0.53□□□□□ -2.49
Lima1Q9ERG0 Gm26712-201ENSMUST00000180813 217 ntBASIC-0.53□□□□□ -2.49
Lima1Q9ERG0 Gm43381-201ENSMUST00000198553 165 ntBASIC-0.53□□□□□ -2.49
Lima1Q9ERG0 Gm25135-201ENSMUST00000082648 143 ntBASIC-0.53□□□□□ -2.49
Lima1Q9ERG0 Gm22489-201ENSMUST00000116813 62 ntBASIC-0.54□□□□□ -2.5
Lima1Q9ERG0 n-R5s39-201ENSMUST00000122613 108 ntBASIC-0.54□□□□□ -2.5
Lima1Q9ERG0 Gm27610-201ENSMUST00000184026 74 ntBASIC-0.54□□□□□ -2.5
Lima1Q9ERG0 Gm27792-201ENSMUST00000184031 115 ntBASIC-0.54□□□□□ -2.5
Lima1Q9ERG0 AC124739.2-201ENSMUST00000222201 109 ntBASIC-0.54□□□□□ -2.5
Lima1Q9ERG0 Gm25797-201ENSMUST00000082640 107 ntBASIC-0.54□□□□□ -2.5
Lima1Q9ERG0 Gm26081-201ENSMUST00000104068 132 ntBASIC-0.55□□□□□ -2.5
Lima1Q9ERG0 Gm24372-201ENSMUST00000104400 110 ntBASIC-0.55□□□□□ -2.5
Lima1Q9ERG0 Gm23654-201ENSMUST00000116758 126 ntBASIC-0.55□□□□□ -2.5
Lima1Q9ERG0 Gm26007-201ENSMUST00000158798 120 ntBASIC-0.55□□□□□ -2.5
Lima1Q9ERG0 Gm25160-201ENSMUST00000158914 102 ntBASIC-0.55□□□□□ -2.5
Lima1Q9ERG0 Gm27884-201ENSMUST00000183865 76 ntBASIC-0.55□□□□□ -2.5
Lima1Q9ERG0 AC109214.2-201ENSMUST00000220089 358 ntBASIC-0.55□□□□□ -2.5
Lima1Q9ERG0 Mir103-1-201ENSMUST00000083619 86 ntBASIC-0.55□□□□□ -2.5
Lima1Q9ERG0 Mir574-201ENSMUST00000103854 78 ntBASIC-0.56□□□□□ -2.5
Lima1Q9ERG0 Gm13339-201ENSMUST00000120651 510 ntBASIC-0.56□□□□□ -2.5
Lima1Q9ERG0 AC125190.3-201ENSMUST00000223224 121 ntBASIC-0.56□□□□□ -2.5
Lima1Q9ERG0 mt-Ta-201ENSMUST00000082398 69 ntBASIC-0.56□□□□□ -2.5
Lima1Q9ERG0 Gm23012-201ENSMUST00000104149 83 ntBASIC-0.57□□□□□ -2.5
Lima1Q9ERG0 Gm22148-201ENSMUST00000104445 107 ntBASIC-0.57□□□□□ -2.5
Lima1Q9ERG0 Gm23545-201ENSMUST00000158205 104 ntBASIC-0.57□□□□□ -2.5
Lima1Q9ERG0 Gm25749-201ENSMUST00000175485 111 ntBASIC-0.57□□□□□ -2.5
Lima1Q9ERG0 Mir7038-201ENSMUST00000184833 71 ntBASIC-0.57□□□□□ -2.5
Lima1Q9ERG0 Gm25184-201ENSMUST00000157753 163 ntBASIC-0.58□□□□□ -2.5
Lima1Q9ERG0 Gm22476-201ENSMUST00000158902 100 ntBASIC-0.58□□□□□ -2.5
Lima1Q9ERG0 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC-0.58□□□□□ -2.5
Lima1Q9ERG0 Gm23141-201ENSMUST00000178682 94 ntBASIC-0.58□□□□□ -2.5
Lima1Q9ERG0 Gm28925-201ENSMUST00000188586 168 ntBASIC-0.58□□□□□ -2.5
Lima1Q9ERG0 AL606472.1-201ENSMUST00000224628 275 ntBASIC-0.58□□□□□ -2.5
Lima1Q9ERG0 Snord61-201ENSMUST00000083176 71 ntBASIC-0.58□□□□□ -2.5
Lima1Q9ERG0 Gm44489-201ENSMUST00000104619 97 ntBASIC-0.59□□□□□ -2.5
Lima1Q9ERG0 Gm24724-201ENSMUST00000158230 107 ntBASIC-0.59□□□□□ -2.5
Lima1Q9ERG0 Gm25366-201ENSMUST00000158845 124 ntBASIC-0.59□□□□□ -2.5
Lima1Q9ERG0 Gm22234-201ENSMUST00000174906 65 ntBASIC-0.59□□□□□ -2.5
Lima1Q9ERG0 Snora15-201ENSMUST00000177461 131 ntBASIC-0.59□□□□□ -2.5
Lima1Q9ERG0 Gm27977-201ENSMUST00000185159 111 ntBASIC-0.59□□□□□ -2.5
Lima1Q9ERG0 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC-0.59□□□□□ -2.5
Lima1Q9ERG0 AC124687.1-201ENSMUST00000221868 189 ntBASIC-0.59□□□□□ -2.5
Lima1Q9ERG0 Mir183-201ENSMUST00000083685 70 ntBASIC-0.59□□□□□ -2.5
Lima1Q9ERG0 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC-0.6□□□□□ -2.51
Lima1Q9ERG0 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC-0.6□□□□□ -2.51
Lima1Q9ERG0 Gm25390-201ENSMUST00000157341 103 ntBASIC-0.61□□□□□ -2.51
Lima1Q9ERG0 Mir488-201ENSMUST00000093595 109 ntBASIC-0.61□□□□□ -2.51
Lima1Q9ERG0 Gm24232-201ENSMUST00000104314 132 ntBASIC-0.62□□□□□ -2.51
Lima1Q9ERG0 Gm24296-201ENSMUST00000158297 106 ntBASIC-0.62□□□□□ -2.51
Lima1Q9ERG0 Mir669m-1-201ENSMUST00000158945 98 ntBASIC-0.62□□□□□ -2.51
Lima1Q9ERG0 Mir7651-201ENSMUST00000184154 64 ntBASIC-0.62□□□□□ -2.51
Lima1Q9ERG0 Mir344h-1-201ENSMUST00000174922 60 ntBASIC-0.63□□□□□ -2.51
Lima1Q9ERG0 Mir344h-2-201ENSMUST00000175612 60 ntBASIC-0.63□□□□□ -2.51
Lima1Q9ERG0 Mir145b-201ENSMUST00000184434 75 ntBASIC-0.63□□□□□ -2.51
Lima1Q9ERG0 Gm44338-201ENSMUST00000198614 110 ntBASIC-0.63□□□□□ -2.51
Lima1Q9ERG0 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC-0.63□□□□□ -2.51
Lima1Q9ERG0 AC154245.1-201ENSMUST00000224615 601 ntBASIC-0.63□□□□□ -2.51
Lima1Q9ERG0 Gm23483-201ENSMUST00000104179 108 ntBASIC-0.64□□□□□ -2.51
Lima1Q9ERG0 Gm24132-201ENSMUST00000104745 91 ntBASIC-0.64□□□□□ -2.51
Lima1Q9ERG0 Gm23987-201ENSMUST00000117039 129 ntBASIC-0.64□□□□□ -2.51
Lima1Q9ERG0 Gm25060-201ENSMUST00000157374 130 ntBASIC-0.64□□□□□ -2.51
Lima1Q9ERG0 Mir7043-201ENSMUST00000184219 70 ntBASIC-0.64□□□□□ -2.51
Lima1Q9ERG0 Mir1a-2-201ENSMUST00000198520 72 ntBASIC-0.64□□□□□ -2.51
Lima1Q9ERG0 Gm25985-201ENSMUST00000122677 107 ntBASIC-0.65□□□□□ -2.51
Lima1Q9ERG0 Gm25834-201ENSMUST00000158916 101 ntBASIC-0.65□□□□□ -2.51
Lima1Q9ERG0 Mir669a-7-201ENSMUST00000180364 87 ntBASIC-0.65□□□□□ -2.51
Retrieved 100 of 76,532 protein–RNA pairs in 170.3 ms