Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 Gm45197-201ENSMUST00000205288 151 ntBASIC0.05□□□□□ -2.4
Scn4aQ9ER60 Gm25006-201ENSMUST00000083813 107 ntBASIC0.05□□□□□ -2.4
Scn4aQ9ER60 Gm25629-201ENSMUST00000084001 107 ntBASIC0.05□□□□□ -2.4
Scn4aQ9ER60 Gm24290-201ENSMUST00000157634 96 ntBASIC0.03□□□□□ -2.4
Scn4aQ9ER60 Gm27803-201ENSMUST00000183763 119 ntBASIC0.03□□□□□ -2.4
Scn4aQ9ER60 mt-Td-201ENSMUST00000082404 70 ntBASIC0.03□□□□□ -2.4
Scn4aQ9ER60 Gm24233-201ENSMUST00000104317 122 ntBASIC0.03□□□□□ -2.4
Scn4aQ9ER60 Gm24500-201ENSMUST00000158447 124 ntBASIC0.03□□□□□ -2.4
Scn4aQ9ER60 Gm23821-201ENSMUST00000158738 106 ntBASIC0.03□□□□□ -2.4
Scn4aQ9ER60 Mir6342-201ENSMUST00000183870 125 ntBASIC0.03□□□□□ -2.4
Scn4aQ9ER60 Mir214-201ENSMUST00000083582 110 ntBASIC0.03□□□□□ -2.4
Scn4aQ9ER60 Ighv15-1-201ENSMUST00000194450 276 ntBASIC0.02□□□□□ -2.41
Scn4aQ9ER60 Gm22981-201ENSMUST00000082611 75 ntBASIC0.02□□□□□ -2.41
Scn4aQ9ER60 Gm25136-201ENSMUST00000083253 115 ntBASIC0.02□□□□□ -2.41
Scn4aQ9ER60 Snord85-201ENSMUST00000083262 73 ntBASIC0.02□□□□□ -2.41
Scn4aQ9ER60 Gm24232-201ENSMUST00000104314 132 ntBASIC0.01□□□□□ -2.41
Scn4aQ9ER60 Gm23917-201ENSMUST00000175256 98 ntBASIC0.01□□□□□ -2.41
Scn4aQ9ER60 Gm27297-201ENSMUST00000183395 105 ntBASIC0.01□□□□□ -2.41
Scn4aQ9ER60 Gm24833-201ENSMUST00000116775 120 ntBASIC0.01□□□□□ -2.41
Scn4aQ9ER60 Snora16a-202ENSMUST00000196061 137 ntBASIC0.01□□□□□ -2.41
Scn4aQ9ER60 Snora75-201ENSMUST00000082903 133 ntBASIC0.01□□□□□ -2.41
Scn4aQ9ER60 Mir302d-201ENSMUST00000083513 66 ntBASIC0.01□□□□□ -2.41
Scn4aQ9ER60 Gm25329-201ENSMUST00000158041 126 ntBASIC0□□□□□ -2.41
Scn4aQ9ER60 Gm37545-201ENSMUST00000186512 148 ntBASIC-0.01□□□□□ -2.41
Scn4aQ9ER60 Mir3065-201ENSMUST00000198674 87 ntBASIC-0.01□□□□□ -2.41
Scn4aQ9ER60 Gm25703-201ENSMUST00000083123 151 ntBASIC-0.01□□□□□ -2.41
Scn4aQ9ER60 Gm25980-201ENSMUST00000157176 218 ntBASIC-0.01□□□□□ -2.41
Scn4aQ9ER60 Mir8107-201ENSMUST00000184024 117 ntBASIC-0.01□□□□□ -2.41
Scn4aQ9ER60 Gm22509-201ENSMUST00000082775 107 ntBASIC-0.01□□□□□ -2.41
Scn4aQ9ER60 Mir20b-201ENSMUST00000102087 80 ntBASIC-0.02□□□□□ -2.41
Scn4aQ9ER60 Gm25408-201ENSMUST00000104104 133 ntBASIC-0.02□□□□□ -2.41
Scn4aQ9ER60 Gm26290-201ENSMUST00000158891 145 ntBASIC-0.02□□□□□ -2.41
Scn4aQ9ER60 Gm38208-201ENSMUST00000192476 114 ntBASIC-0.02□□□□□ -2.41
Scn4aQ9ER60 Gm23320-201ENSMUST00000104462 127 ntBASIC-0.03□□□□□ -2.41
Scn4aQ9ER60 Mir6928-201ENSMUST00000185166 70 ntBASIC-0.03□□□□□ -2.41
Scn4aQ9ER60 Mir6375-201ENSMUST00000197176 95 ntBASIC-0.03□□□□□ -2.41
Scn4aQ9ER60 Gm25482-201ENSMUST00000083225 107 ntBASIC-0.03□□□□□ -2.41
Scn4aQ9ER60 Gm25184-201ENSMUST00000157753 163 ntBASIC-0.03□□□□□ -2.42
Scn4aQ9ER60 Gm25654-201ENSMUST00000158467 88 ntBASIC-0.03□□□□□ -2.42
Scn4aQ9ER60 Gm22327-201ENSMUST00000158899 108 ntBASIC-0.03□□□□□ -2.42
Scn4aQ9ER60 Gm25309-201ENSMUST00000116728 126 ntBASIC-0.04□□□□□ -2.42
Scn4aQ9ER60 Gm26426-201ENSMUST00000177866 123 ntBASIC-0.04□□□□□ -2.42
Scn4aQ9ER60 Gm26060-201ENSMUST00000180094 123 ntBASIC-0.04□□□□□ -2.42
Scn4aQ9ER60 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC-0.04□□□□□ -2.42
Scn4aQ9ER60 Gm23258-201ENSMUST00000158319 106 ntBASIC-0.05□□□□□ -2.42
Scn4aQ9ER60 Mir3105-201ENSMUST00000175480 85 ntBASIC-0.05□□□□□ -2.42
Scn4aQ9ER60 Gm23977-201ENSMUST00000177871 74 ntBASIC-0.05□□□□□ -2.42
Scn4aQ9ER60 Mir672-201ENSMUST00000102331 100 ntBASIC-0.06□□□□□ -2.42
Scn4aQ9ER60 Gm22087-201ENSMUST00000158339 88 ntBASIC-0.06□□□□□ -2.42
Scn4aQ9ER60 Gm23788-201ENSMUST00000122535 106 ntBASIC-0.06□□□□□ -2.42
Scn4aQ9ER60 Gm14838-201ENSMUST00000118913 248 ntBASIC-0.07□□□□□ -2.42
Scn4aQ9ER60 Gm25716-201ENSMUST00000158628 104 ntBASIC-0.07□□□□□ -2.42
Scn4aQ9ER60 Gm22973-201ENSMUST00000083298 191 ntBASIC-0.07□□□□□ -2.42
Scn4aQ9ER60 Mir382-201ENSMUST00000083494 76 ntBASIC-0.07□□□□□ -2.42
Scn4aQ9ER60 Mir487b-201ENSMUST00000102265 82 ntBASIC-0.08□□□□□ -2.42
Scn4aQ9ER60 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC-0.08□□□□□ -2.42
Scn4aQ9ER60 Gm24091-201ENSMUST00000082550 83 ntBASIC-0.08□□□□□ -2.42
Scn4aQ9ER60 Mir142b-201ENSMUST00000083486 115 ntBASIC-0.08□□□□□ -2.42
Scn4aQ9ER60 Gm23711-201ENSMUST00000083856 83 ntBASIC-0.08□□□□□ -2.42
Scn4aQ9ER60 Gm24415-201ENSMUST00000180218 107 ntBASIC-0.08□□□□□ -2.42
Scn4aQ9ER60 Gm25040-201ENSMUST00000103877 66 ntBASIC-0.09□□□□□ -2.42
Scn4aQ9ER60 Gm23482-201ENSMUST00000104172 122 ntBASIC-0.09□□□□□ -2.42
Scn4aQ9ER60 Gm22077-201ENSMUST00000157594 93 ntBASIC-0.09□□□□□ -2.42
Scn4aQ9ER60 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC-0.1□□□□□ -2.43
Scn4aQ9ER60 Snord91a-201ENSMUST00000104305 93 ntBASIC-0.1□□□□□ -2.43
Scn4aQ9ER60 Gm26398-201ENSMUST00000179015 127 ntBASIC-0.1□□□□□ -2.43
Scn4aQ9ER60 Gm44338-201ENSMUST00000198614 110 ntBASIC-0.1□□□□□ -2.43
Scn4aQ9ER60 Gm44602-201ENSMUST00000205948 132 ntBASIC-0.1□□□□□ -2.43
Scn4aQ9ER60 Gm25974-201ENSMUST00000158701 94 ntBASIC-0.1□□□□□ -2.43
Scn4aQ9ER60 Snord90-201ENSMUST00000104568 111 ntBASIC-0.11□□□□□ -2.43
Scn4aQ9ER60 Gm22259-201ENSMUST00000178926 107 ntBASIC-0.11□□□□□ -2.43
Scn4aQ9ER60 Gm18665-201ENSMUST00000189783 270 ntBASIC-0.11□□□□□ -2.43
Scn4aQ9ER60 Mir18-201ENSMUST00000083469 96 ntBASIC-0.11□□□□□ -2.43
Scn4aQ9ER60 Gm44489-201ENSMUST00000104619 97 ntBASIC-0.12□□□□□ -2.43
Scn4aQ9ER60 Gm29432-201ENSMUST00000185397 139 ntBASIC-0.12□□□□□ -2.43
Scn4aQ9ER60 Gm6607-201ENSMUST00000215035 328 ntBASIC-0.12□□□□□ -2.43
Scn4aQ9ER60 Gm21940-201ENSMUST00000204940 2278 ntBASIC-0.12□□□□□ -2.43
Scn4aQ9ER60 Gm23253-201ENSMUST00000157441 104 ntBASIC-0.13□□□□□ -2.43
Scn4aQ9ER60 Gm14502-201ENSMUST00000118154 113 ntBASIC-0.13□□□□□ -2.43
Scn4aQ9ER60 Gm26403-201ENSMUST00000158500 105 ntBASIC-0.13□□□□□ -2.43
Scn4aQ9ER60 Gm23291-201ENSMUST00000175611 78 ntBASIC-0.13□□□□□ -2.43
Scn4aQ9ER60 Mir21c-201ENSMUST00000184910 78 ntBASIC-0.13□□□□□ -2.43
Scn4aQ9ER60 Gm42845-201ENSMUST00000197766 105 ntBASIC-0.13□□□□□ -2.43
Scn4aQ9ER60 AC124687.1-201ENSMUST00000221868 189 ntBASIC-0.13□□□□□ -2.43
Scn4aQ9ER60 Gm23509-201ENSMUST00000083080 160 ntBASIC-0.13□□□□□ -2.43
Scn4aQ9ER60 Mir145a-201ENSMUST00000083658 70 ntBASIC-0.13□□□□□ -2.43
Scn4aQ9ER60 Gm26084-201ENSMUST00000157903 104 ntBASIC-0.14□□□□□ -2.43
Scn4aQ9ER60 Gm44803-201ENSMUST00000204384 156 ntBASIC-0.14□□□□□ -2.43
Scn4aQ9ER60 Gm24372-201ENSMUST00000104400 110 ntBASIC-0.15□□□□□ -2.43
Scn4aQ9ER60 Gm13065-201ENSMUST00000119178 141 ntBASIC-0.15□□□□□ -2.43
Scn4aQ9ER60 Gm24648-201ENSMUST00000157111 132 ntBASIC-0.15□□□□□ -2.43
Scn4aQ9ER60 Gm24009-201ENSMUST00000157734 93 ntBASIC-0.15□□□□□ -2.43
Scn4aQ9ER60 Mir1966-201ENSMUST00000158807 108 ntBASIC-0.15□□□□□ -2.43
Scn4aQ9ER60 Gm25307-201ENSMUST00000158885 106 ntBASIC-0.15□□□□□ -2.43
Scn4aQ9ER60 Gm22348-201ENSMUST00000178674 79 ntBASIC-0.15□□□□□ -2.43
Scn4aQ9ER60 Gm44922-201ENSMUST00000206690 90 ntBASIC-0.15□□□□□ -2.43
Scn4aQ9ER60 Gm22105-201ENSMUST00000116734 116 ntBASIC-0.15□□□□□ -2.43
Scn4aQ9ER60 Gm17020-201ENSMUST00000172274 274 ntBASIC-0.15□□□□□ -2.43
Scn4aQ9ER60 Gm23303-201ENSMUST00000082714 152 ntBASIC-0.15□□□□□ -2.43
Scn4aQ9ER60 Gm22788-201ENSMUST00000157876 61 ntBASIC-0.16□□□□□ -2.44
Retrieved 100 of 76,532 protein–RNA pairs in 174.4 ms