Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm20734-201ENSMUST00000216939 193 ntBASIC0.67□□□□□ -2.3
Ddx56Q9D0R4 Gm29535-201ENSMUST00000185723 109 ntBASIC0.66□□□□□ -2.3
Ddx56Q9D0R4 Gm28143-201ENSMUST00000191082 109 ntBASIC0.66□□□□□ -2.3
Ddx56Q9D0R4 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC0.66□□□□□ -2.3
Ddx56Q9D0R4 Gm22673-201ENSMUST00000104415 131 ntBASIC0.65□□□□□ -2.31
Ddx56Q9D0R4 Gm22520-201ENSMUST00000158269 129 ntBASIC0.65□□□□□ -2.31
Ddx56Q9D0R4 Gm25976-201ENSMUST00000158695 130 ntBASIC0.65□□□□□ -2.31
Ddx56Q9D0R4 Gm25071-201ENSMUST00000175232 70 ntBASIC0.65□□□□□ -2.31
Ddx56Q9D0R4 Gm23922-201ENSMUST00000178792 79 ntBASIC0.65□□□□□ -2.31
Ddx56Q9D0R4 Gm24657-201ENSMUST00000180085 79 ntBASIC0.65□□□□□ -2.31
Ddx56Q9D0R4 Gm22996-201ENSMUST00000180236 79 ntBASIC0.65□□□□□ -2.31
Ddx56Q9D0R4 Mir1949-202ENSMUST00000199259 70 ntBASIC0.65□□□□□ -2.31
Ddx56Q9D0R4 Gm13065-201ENSMUST00000119178 141 ntBASIC0.64□□□□□ -2.31
Ddx56Q9D0R4 Gm16265-201ENSMUST00000134558 108 ntBASIC0.64□□□□□ -2.31
Ddx56Q9D0R4 Gm22708-201ENSMUST00000158987 103 ntBASIC0.64□□□□□ -2.31
Ddx56Q9D0R4 Gm24920-201ENSMUST00000083018 85 ntBASIC0.64□□□□□ -2.31
Ddx56Q9D0R4 Gm27851-201ENSMUST00000183529 63 ntBASIC0.63□□□□□ -2.31
Ddx56Q9D0R4 Gm26202-201ENSMUST00000082910 65 ntBASIC0.63□□□□□ -2.31
Ddx56Q9D0R4 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.63□□□□□ -2.31
Ddx56Q9D0R4 n-R5s39-201ENSMUST00000122613 108 ntBASIC0.62□□□□□ -2.31
Ddx56Q9D0R4 Gm25623-201ENSMUST00000157216 108 ntBASIC0.62□□□□□ -2.31
Ddx56Q9D0R4 Gm22565-201ENSMUST00000175540 69 ntBASIC0.62□□□□□ -2.31
Ddx56Q9D0R4 Gm44308-201ENSMUST00000197080 99 ntBASIC0.62□□□□□ -2.31
Ddx56Q9D0R4 Gm45265-201ENSMUST00000210852 2497 ntBASIC0.61□□□□□ -2.31
Ddx56Q9D0R4 Gm23578-201ENSMUST00000103943 104 ntBASIC0.61□□□□□ -2.31
Ddx56Q9D0R4 Gm25170-201ENSMUST00000104191 129 ntBASIC0.61□□□□□ -2.31
Ddx56Q9D0R4 Gm16186-201ENSMUST00000120132 216 ntBASIC0.61□□□□□ -2.31
Ddx56Q9D0R4 Gm24379-201ENSMUST00000122695 86 ntBASIC0.6□□□□□ -2.31
Ddx56Q9D0R4 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.6□□□□□ -2.31
Ddx56Q9D0R4 Mirlet7g-201ENSMUST00000083506 88 ntBASIC0.6□□□□□ -2.31
Ddx56Q9D0R4 Gm24449-201ENSMUST00000083985 106 ntBASIC0.6□□□□□ -2.31
Ddx56Q9D0R4 Gm25393-201ENSMUST00000157336 285 ntBASIC0.59□□□□□ -2.31
Ddx56Q9D0R4 Gm25974-201ENSMUST00000158701 94 ntBASIC0.59□□□□□ -2.31
Ddx56Q9D0R4 Gm26236-201ENSMUST00000175536 137 ntBASIC0.59□□□□□ -2.31
Ddx56Q9D0R4 Gm27297-201ENSMUST00000183395 105 ntBASIC0.59□□□□□ -2.31
Ddx56Q9D0R4 AC124687.1-201ENSMUST00000221868 189 ntBASIC0.59□□□□□ -2.31
Ddx56Q9D0R4 Gm22652-201ENSMUST00000083207 131 ntBASIC0.59□□□□□ -2.31
Ddx56Q9D0R4 Gm26168-201ENSMUST00000083787 112 ntBASIC0.59□□□□□ -2.31
Ddx56Q9D0R4 Gm22003-201ENSMUST00000101885 107 ntBASIC0.58□□□□□ -2.32
Ddx56Q9D0R4 Gm24323-201ENSMUST00000175342 77 ntBASIC0.58□□□□□ -2.32
Ddx56Q9D0R4 Gm24321-201ENSMUST00000175348 80 ntBASIC0.58□□□□□ -2.32
Ddx56Q9D0R4 Gm8034-201ENSMUST00000178853 132 ntBASIC0.58□□□□□ -2.32
Ddx56Q9D0R4 Gm23410-201ENSMUST00000179967 107 ntBASIC0.58□□□□□ -2.32
Ddx56Q9D0R4 Gm22756-201ENSMUST00000180118 107 ntBASIC0.58□□□□□ -2.32
Ddx56Q9D0R4 Gm27717-201ENSMUST00000183933 151 ntBASIC0.58□□□□□ -2.32
Ddx56Q9D0R4 mt-Tt-201ENSMUST00000082422 67 ntBASIC0.58□□□□□ -2.32
Ddx56Q9D0R4 Snora75-201ENSMUST00000082903 133 ntBASIC0.58□□□□□ -2.32
Ddx56Q9D0R4 Gm22505-201ENSMUST00000082956 108 ntBASIC0.58□□□□□ -2.32
Ddx56Q9D0R4 Gm22363-201ENSMUST00000083100 108 ntBASIC0.58□□□□□ -2.32
Ddx56Q9D0R4 Gm23814-201ENSMUST00000083230 102 ntBASIC0.58□□□□□ -2.32
Ddx56Q9D0R4 Gm23095-201ENSMUST00000083446 107 ntBASIC0.58□□□□□ -2.32
Ddx56Q9D0R4 Gm10813-201ENSMUST00000099936 90 ntBASIC0.58□□□□□ -2.32
Ddx56Q9D0R4 Gm25040-201ENSMUST00000103877 66 ntBASIC0.57□□□□□ -2.32
Ddx56Q9D0R4 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC0.57□□□□□ -2.32
Ddx56Q9D0R4 Mir6905-201ENSMUST00000184228 70 ntBASIC0.57□□□□□ -2.32
Ddx56Q9D0R4 Gm42506-201ENSMUST00000202009 150 ntBASIC0.57□□□□□ -2.32
Ddx56Q9D0R4 Gm23986-201ENSMUST00000157144 63 ntBASIC0.56□□□□□ -2.32
Ddx56Q9D0R4 Gm26498-201ENSMUST00000177799 79 ntBASIC0.56□□□□□ -2.32
Ddx56Q9D0R4 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC0.56□□□□□ -2.32
Ddx56Q9D0R4 Gm26230-201ENSMUST00000180141 79 ntBASIC0.56□□□□□ -2.32
Ddx56Q9D0R4 Gm44455-201ENSMUST00000200061 82 ntBASIC0.56□□□□□ -2.32
Ddx56Q9D0R4 Gm45541-201ENSMUST00000210443 54 ntBASIC0.56□□□□□ -2.32
Ddx56Q9D0R4 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
Ddx56Q9D0R4 Gm23991-201ENSMUST00000117033 93 ntBASIC0.55□□□□□ -2.32
Ddx56Q9D0R4 Gm11694-201ENSMUST00000118637 159 ntBASIC0.55□□□□□ -2.32
Ddx56Q9D0R4 Gm24649-201ENSMUST00000157106 134 ntBASIC0.55□□□□□ -2.32
Ddx56Q9D0R4 Mir7229-201ENSMUST00000197062 53 ntBASIC0.55□□□□□ -2.32
Ddx56Q9D0R4 Gm22302-201ENSMUST00000082657 106 ntBASIC0.55□□□□□ -2.32
Ddx56Q9D0R4 Gm25894-201ENSMUST00000083458 75 ntBASIC0.55□□□□□ -2.32
Ddx56Q9D0R4 Mir764-201ENSMUST00000103259 108 ntBASIC0.54□□□□□ -2.32
Ddx56Q9D0R4 Gm24278-201ENSMUST00000104239 127 ntBASIC0.54□□□□□ -2.32
Ddx56Q9D0R4 Gm25274-201ENSMUST00000104296 135 ntBASIC0.54□□□□□ -2.32
Ddx56Q9D0R4 Gm14400-201ENSMUST00000117234 2135 ntBASIC0.54□□□□□ -2.32
Ddx56Q9D0R4 Gm24842-201ENSMUST00000158681 54 ntBASIC0.54□□□□□ -2.32
Ddx56Q9D0R4 Gm44602-201ENSMUST00000205948 132 ntBASIC0.54□□□□□ -2.32
Ddx56Q9D0R4 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.54□□□□□ -2.32
Ddx56Q9D0R4 Gm24233-201ENSMUST00000104317 122 ntBASIC0.53□□□□□ -2.32
Ddx56Q9D0R4 Gm22196-201ENSMUST00000116865 109 ntBASIC0.53□□□□□ -2.32
Ddx56Q9D0R4 Gm25680-201ENSMUST00000116917 126 ntBASIC0.53□□□□□ -2.32
Ddx56Q9D0R4 Gm22635-201ENSMUST00000116962 126 ntBASIC0.53□□□□□ -2.32
Ddx56Q9D0R4 Gm22336-201ENSMUST00000157719 107 ntBASIC0.53□□□□□ -2.32
Ddx56Q9D0R4 Gm44457-201ENSMUST00000198109 76 ntBASIC0.53□□□□□ -2.32
Ddx56Q9D0R4 Mir802-201ENSMUST00000103258 97 ntBASIC0.52□□□□□ -2.33
Ddx56Q9D0R4 Snord64-201ENSMUST00000104003 67 ntBASIC0.52□□□□□ -2.33
Ddx56Q9D0R4 Gm22983-201ENSMUST00000158308 104 ntBASIC0.52□□□□□ -2.33
Ddx56Q9D0R4 Mir6394-201ENSMUST00000184738 99 ntBASIC0.52□□□□□ -2.33
Ddx56Q9D0R4 Gm38298-201ENSMUST00000193578 118 ntBASIC0.52□□□□□ -2.33
Ddx56Q9D0R4 AC164561.1-201ENSMUST00000220414 115 ntBASIC0.52□□□□□ -2.33
Ddx56Q9D0R4 Gm23661-201ENSMUST00000122630 87 ntBASIC0.51□□□□□ -2.33
Ddx56Q9D0R4 Gm23601-201ENSMUST00000157259 131 ntBASIC0.51□□□□□ -2.33
Ddx56Q9D0R4 Gm24009-201ENSMUST00000157734 93 ntBASIC0.51□□□□□ -2.33
Ddx56Q9D0R4 Gm23678-201ENSMUST00000083157 107 ntBASIC0.51□□□□□ -2.33
Ddx56Q9D0R4 Gm22297-201ENSMUST00000083312 106 ntBASIC0.51□□□□□ -2.33
Ddx56Q9D0R4 Gm25416-201ENSMUST00000104221 107 ntBASIC0.5□□□□□ -2.33
Ddx56Q9D0R4 Gm22558-201ENSMUST00000157326 95 ntBASIC0.5□□□□□ -2.33
Ddx56Q9D0R4 Gm22638-201ENSMUST00000179674 107 ntBASIC0.5□□□□□ -2.33
Ddx56Q9D0R4 Mir6985-201ENSMUST00000184641 61 ntBASIC0.5□□□□□ -2.33
Ddx56Q9D0R4 Gm43927-201ENSMUST00000204599 117 ntBASIC0.5□□□□□ -2.33
Ddx56Q9D0R4 Gm25006-201ENSMUST00000083813 107 ntBASIC0.5□□□□□ -2.33
Ddx56Q9D0R4 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC0.49□□□□□ -2.33
Retrieved 100 of 76,532 protein–RNA pairs in 165.5 ms