Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm27943-201ENSMUST00000184844 116 ntBASIC0.23□□□□□ -2.37
Smc1aQ9CU62 Gm25136-201ENSMUST00000083253 115 ntBASIC0.23□□□□□ -2.37
Smc1aQ9CU62 Gm24833-201ENSMUST00000116775 120 ntBASIC0.22□□□□□ -2.37
Smc1aQ9CU62 Gm24131-201ENSMUST00000158539 107 ntBASIC0.22□□□□□ -2.37
Smc1aQ9CU62 Gm27717-201ENSMUST00000183933 151 ntBASIC0.22□□□□□ -2.37
Smc1aQ9CU62 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC0.22□□□□□ -2.37
Smc1aQ9CU62 Gm45265-201ENSMUST00000210852 2497 ntBASIC0.21□□□□□ -2.38
Smc1aQ9CU62 Snord70-201ENSMUST00000104157 87 ntBASIC0.21□□□□□ -2.38
Smc1aQ9CU62 Gm25885-201ENSMUST00000157779 109 ntBASIC0.21□□□□□ -2.38
Smc1aQ9CU62 Gm24054-201ENSMUST00000158619 105 ntBASIC0.21□□□□□ -2.38
Smc1aQ9CU62 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
Smc1aQ9CU62 Gm44338-201ENSMUST00000198614 110 ntBASIC0.21□□□□□ -2.38
Smc1aQ9CU62 Mir1949-202ENSMUST00000199259 70 ntBASIC0.21□□□□□ -2.38
Smc1aQ9CU62 Gm44853-201ENSMUST00000209070 250 ntBASIC0.21□□□□□ -2.38
Smc1aQ9CU62 Gm23445-201ENSMUST00000082800 107 ntBASIC0.21□□□□□ -2.38
Smc1aQ9CU62 Gm23509-201ENSMUST00000083080 160 ntBASIC0.21□□□□□ -2.38
Smc1aQ9CU62 Mirlet7g-201ENSMUST00000083506 88 ntBASIC0.21□□□□□ -2.38
Smc1aQ9CU62 Gm24278-201ENSMUST00000104239 127 ntBASIC0.2□□□□□ -2.38
Smc1aQ9CU62 Gm22337-201ENSMUST00000157721 132 ntBASIC0.2□□□□□ -2.38
Smc1aQ9CU62 Scarna8-201ENSMUST00000158333 131 ntBASIC0.2□□□□□ -2.38
Smc1aQ9CU62 Gm25600-201ENSMUST00000158357 106 ntBASIC0.2□□□□□ -2.38
Smc1aQ9CU62 Gm22699-201ENSMUST00000175376 105 ntBASIC0.2□□□□□ -2.38
Smc1aQ9CU62 Gm22373-201ENSMUST00000104584 89 ntBASIC0.19□□□□□ -2.38
Smc1aQ9CU62 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC0.19□□□□□ -2.38
Smc1aQ9CU62 Mir3105-201ENSMUST00000175480 85 ntBASIC0.19□□□□□ -2.38
Smc1aQ9CU62 Gm37545-201ENSMUST00000186512 148 ntBASIC0.19□□□□□ -2.38
Smc1aQ9CU62 Gm13065-201ENSMUST00000119178 141 ntBASIC0.18□□□□□ -2.38
Smc1aQ9CU62 Gm23253-201ENSMUST00000157441 104 ntBASIC0.18□□□□□ -2.38
Smc1aQ9CU62 Mir1966-201ENSMUST00000158807 108 ntBASIC0.18□□□□□ -2.38
Smc1aQ9CU62 Gm26290-201ENSMUST00000158891 145 ntBASIC0.18□□□□□ -2.38
Smc1aQ9CU62 Gm25599-201ENSMUST00000157816 103 ntBASIC0.17□□□□□ -2.38
Smc1aQ9CU62 Gm24129-201ENSMUST00000158537 97 ntBASIC0.17□□□□□ -2.38
Smc1aQ9CU62 Gm25716-201ENSMUST00000158628 104 ntBASIC0.17□□□□□ -2.38
Smc1aQ9CU62 Mir3108-201ENSMUST00000175500 79 ntBASIC0.17□□□□□ -2.38
Smc1aQ9CU62 Gm23864-201ENSMUST00000177607 107 ntBASIC0.17□□□□□ -2.38
Smc1aQ9CU62 Mir376b-201ENSMUST00000195930 82 ntBASIC0.17□□□□□ -2.38
Smc1aQ9CU62 Snord47-201ENSMUST00000083034 77 ntBASIC0.17□□□□□ -2.38
Smc1aQ9CU62 Gm23947-201ENSMUST00000093636 107 ntBASIC0.17□□□□□ -2.38
Smc1aQ9CU62 Gm23337-201ENSMUST00000158959 118 ntBASIC0.16□□□□□ -2.38
Smc1aQ9CU62 Gm26398-201ENSMUST00000179015 127 ntBASIC0.16□□□□□ -2.38
Smc1aQ9CU62 Snora75-201ENSMUST00000082903 133 ntBASIC0.16□□□□□ -2.38
Smc1aQ9CU62 Gm26011-201ENSMUST00000104410 104 ntBASIC0.15□□□□□ -2.39
Smc1aQ9CU62 Gm23990-201ENSMUST00000117031 117 ntBASIC0.15□□□□□ -2.39
Smc1aQ9CU62 Gm23761-201ENSMUST00000158347 104 ntBASIC0.15□□□□□ -2.39
Smc1aQ9CU62 Mir670-201ENSMUST00000102380 100 ntBASIC0.14□□□□□ -2.39
Smc1aQ9CU62 Gm25040-201ENSMUST00000103877 66 ntBASIC0.14□□□□□ -2.39
Smc1aQ9CU62 Snord90-201ENSMUST00000104568 111 ntBASIC0.14□□□□□ -2.39
Smc1aQ9CU62 Gm16186-201ENSMUST00000120132 216 ntBASIC0.14□□□□□ -2.39
Smc1aQ9CU62 Mir3089-201ENSMUST00000175350 84 ntBASIC0.14□□□□□ -2.39
Smc1aQ9CU62 Gm25408-201ENSMUST00000104104 133 ntBASIC0.13□□□□□ -2.39
Smc1aQ9CU62 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC0.13□□□□□ -2.39
Smc1aQ9CU62 Gm26225-201ENSMUST00000082508 135 ntBASIC0.13□□□□□ -2.39
Smc1aQ9CU62 Gm22303-201ENSMUST00000082686 122 ntBASIC0.13□□□□□ -2.39
Smc1aQ9CU62 Gm24233-201ENSMUST00000104317 122 ntBASIC0.12□□□□□ -2.39
Smc1aQ9CU62 Gm25974-201ENSMUST00000158701 94 ntBASIC0.12□□□□□ -2.39
Smc1aQ9CU62 Gm23020-201ENSMUST00000158766 253 ntBASIC0.12□□□□□ -2.39
Smc1aQ9CU62 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC0.12□□□□□ -2.39
Smc1aQ9CU62 Gm25316-201ENSMUST00000116826 118 ntBASIC0.11□□□□□ -2.39
Smc1aQ9CU62 Gm23821-201ENSMUST00000158738 106 ntBASIC0.11□□□□□ -2.39
Smc1aQ9CU62 Gm25952-201ENSMUST00000175329 74 ntBASIC0.11□□□□□ -2.39
Smc1aQ9CU62 Gm28001-201ENSMUST00000183561 117 ntBASIC0.11□□□□□ -2.39
Smc1aQ9CU62 Gm25797-201ENSMUST00000082640 107 ntBASIC0.11□□□□□ -2.39
Smc1aQ9CU62 Gm22973-201ENSMUST00000083298 191 ntBASIC0.11□□□□□ -2.39
Smc1aQ9CU62 Gm24793-201ENSMUST00000104289 132 ntBASIC0.1□□□□□ -2.39
Smc1aQ9CU62 Gm24246-201ENSMUST00000157315 132 ntBASIC0.1□□□□□ -2.39
Smc1aQ9CU62 Gm44602-201ENSMUST00000205948 132 ntBASIC0.1□□□□□ -2.39
Smc1aQ9CU62 Gm22169-201ENSMUST00000083229 107 ntBASIC0.1□□□□□ -2.39
Smc1aQ9CU62 Gm25060-201ENSMUST00000157374 130 ntBASIC0.09□□□□□ -2.4
Smc1aQ9CU62 Gm24461-201ENSMUST00000082735 103 ntBASIC0.09□□□□□ -2.4
Smc1aQ9CU62 Gm22652-201ENSMUST00000083207 131 ntBASIC0.09□□□□□ -2.4
Smc1aQ9CU62 Gm24750-201ENSMUST00000157843 104 ntBASIC0.08□□□□□ -2.4
Smc1aQ9CU62 Gm23504-201ENSMUST00000158988 95 ntBASIC0.08□□□□□ -2.4
Smc1aQ9CU62 Traj61-201ENSMUST00000165025 72 ntBASIC0.08□□□□□ -2.4
Smc1aQ9CU62 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC0.08□□□□□ -2.4
Smc1aQ9CU62 Gm26202-201ENSMUST00000082910 65 ntBASIC0.08□□□□□ -2.4
Smc1aQ9CU62 Mir141-201ENSMUST00000083540 72 ntBASIC0.08□□□□□ -2.4
Smc1aQ9CU62 Gm25629-201ENSMUST00000084001 107 ntBASIC0.08□□□□□ -2.4
Smc1aQ9CU62 Gm23749-201ENSMUST00000104223 131 ntBASIC0.07□□□□□ -2.4
Smc1aQ9CU62 Gm23661-201ENSMUST00000122630 87 ntBASIC0.07□□□□□ -2.4
Smc1aQ9CU62 Gm24718-201ENSMUST00000157521 136 ntBASIC0.07□□□□□ -2.4
Smc1aQ9CU62 Gm24903-201ENSMUST00000158131 126 ntBASIC0.07□□□□□ -2.4
Smc1aQ9CU62 Gm24106-201ENSMUST00000175498 127 ntBASIC0.07□□□□□ -2.4
Smc1aQ9CU62 Gm25410-201ENSMUST00000083758 137 ntBASIC0.07□□□□□ -2.4
Smc1aQ9CU62 Gm22195-201ENSMUST00000116861 108 ntBASIC0.06□□□□□ -2.4
Smc1aQ9CU62 Gm11694-201ENSMUST00000118637 159 ntBASIC0.06□□□□□ -2.4
Smc1aQ9CU62 Gm26091-201ENSMUST00000122704 82 ntBASIC0.06□□□□□ -2.4
Smc1aQ9CU62 Gm23036-201ENSMUST00000157885 99 ntBASIC0.06□□□□□ -2.4
Smc1aQ9CU62 Ighv15-1-201ENSMUST00000194450 276 ntBASIC0.06□□□□□ -2.4
Smc1aQ9CU62 Gm18502-201ENSMUST00000218679 199 ntBASIC0.06□□□□□ -2.4
Smc1aQ9CU62 Gm25056-201ENSMUST00000157372 62 ntBASIC0.05□□□□□ -2.4
Smc1aQ9CU62 Gm27297-201ENSMUST00000183395 105 ntBASIC0.05□□□□□ -2.4
Smc1aQ9CU62 Mir8107-201ENSMUST00000184024 117 ntBASIC0.05□□□□□ -2.4
Smc1aQ9CU62 Gm44345-201ENSMUST00000199560 135 ntBASIC0.05□□□□□ -2.4
Smc1aQ9CU62 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC0.05□□□□□ -2.4
Smc1aQ9CU62 Snord95-201ENSMUST00000082846 68 ntBASIC0.05□□□□□ -2.4
Smc1aQ9CU62 Mir764-201ENSMUST00000103259 108 ntBASIC0.04□□□□□ -2.4
Smc1aQ9CU62 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
Smc1aQ9CU62 Gm24009-201ENSMUST00000157734 93 ntBASIC0.04□□□□□ -2.4
Smc1aQ9CU62 Gm45197-201ENSMUST00000205288 151 ntBASIC0.04□□□□□ -2.4
Smc1aQ9CU62 Mir18-201ENSMUST00000083469 96 ntBASIC0.04□□□□□ -2.4
Retrieved 100 of 76,532 protein–RNA pairs in 7.2 ms