Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Gm26395-201ENSMUST00000104094 132 ntBASIC-0.41□□□□□ -2.48
Ccdc43Q9CR29 Snord91a-201ENSMUST00000104305 93 ntBASIC-0.41□□□□□ -2.48
Ccdc43Q9CR29 Gm23661-201ENSMUST00000122630 87 ntBASIC-0.41□□□□□ -2.48
Ccdc43Q9CR29 Gm22942-201ENSMUST00000158563 124 ntBASIC-0.41□□□□□ -2.48
Ccdc43Q9CR29 Gm22951-201ENSMUST00000179471 107 ntBASIC-0.41□□□□□ -2.48
Ccdc43Q9CR29 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC-0.41□□□□□ -2.48
Ccdc43Q9CR29 Gm18665-201ENSMUST00000189783 270 ntBASIC-0.41□□□□□ -2.48
Ccdc43Q9CR29 n-R5s96-201ENSMUST00000082574 124 ntBASIC-0.41□□□□□ -2.48
Ccdc43Q9CR29 Mir302d-201ENSMUST00000083513 66 ntBASIC-0.41□□□□□ -2.48
Ccdc43Q9CR29 Gm25885-201ENSMUST00000157779 109 ntBASIC-0.42□□□□□ -2.48
Ccdc43Q9CR29 Gm24467-201ENSMUST00000157887 126 ntBASIC-0.42□□□□□ -2.48
Ccdc43Q9CR29 Gm22962-201ENSMUST00000157962 73 ntBASIC-0.42□□□□□ -2.48
Ccdc43Q9CR29 Gm26210-201ENSMUST00000158680 91 ntBASIC-0.42□□□□□ -2.48
Ccdc43Q9CR29 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC-0.42□□□□□ -2.48
Ccdc43Q9CR29 Mir6915-201ENSMUST00000198839 69 ntBASIC-0.42□□□□□ -2.48
Ccdc43Q9CR29 mt-Tc-201ENSMUST00000082400 66 ntBASIC-0.42□□□□□ -2.48
Ccdc43Q9CR29 Snord61-201ENSMUST00000083176 71 ntBASIC-0.42□□□□□ -2.48
Ccdc43Q9CR29 Mir214-201ENSMUST00000083582 110 ntBASIC-0.43□□□□□ -2.48
Ccdc43Q9CR29 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC-0.44□□□□□ -2.48
Ccdc43Q9CR29 Gm25756-201ENSMUST00000103990 136 ntBASIC-0.44□□□□□ -2.48
Ccdc43Q9CR29 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC-0.44□□□□□ -2.48
Ccdc43Q9CR29 Gm24793-201ENSMUST00000104289 132 ntBASIC-0.45□□□□□ -2.48
Ccdc43Q9CR29 Gm11694-201ENSMUST00000118637 159 ntBASIC-0.45□□□□□ -2.48
Ccdc43Q9CR29 Gm24009-201ENSMUST00000157734 93 ntBASIC-0.45□□□□□ -2.48
Ccdc43Q9CR29 Gm23159-201ENSMUST00000175088 77 ntBASIC-0.45□□□□□ -2.48
Ccdc43Q9CR29 Gm44489-201ENSMUST00000104619 97 ntBASIC-0.46□□□□□ -2.48
Ccdc43Q9CR29 Gm22087-201ENSMUST00000158339 88 ntBASIC-0.46□□□□□ -2.48
Ccdc43Q9CR29 Gm42623-201ENSMUST00000197225 379 ntBASIC-0.46□□□□□ -2.48
Ccdc43Q9CR29 Gm22788-201ENSMUST00000157876 61 ntBASIC-0.47□□□□□ -2.48
Ccdc43Q9CR29 Gm27285-201ENSMUST00000183875 127 ntBASIC-0.47□□□□□ -2.48
Ccdc43Q9CR29 Mir191-201ENSMUST00000196210 74 ntBASIC-0.47□□□□□ -2.48
Ccdc43Q9CR29 Gm25184-201ENSMUST00000157753 163 ntBASIC-0.48□□□□□ -2.49
Ccdc43Q9CR29 Gm24073-201ENSMUST00000158177 106 ntBASIC-0.48□□□□□ -2.49
Ccdc43Q9CR29 Gm27803-201ENSMUST00000183763 119 ntBASIC-0.48□□□□□ -2.49
Ccdc43Q9CR29 Gm25497-201ENSMUST00000104425 132 ntBASIC-0.49□□□□□ -2.49
Ccdc43Q9CR29 Gm25338-201ENSMUST00000116849 120 ntBASIC-0.49□□□□□ -2.49
Ccdc43Q9CR29 AL845349.1-201ENSMUST00000213794 78 ntBASIC-0.49□□□□□ -2.49
Ccdc43Q9CR29 Gm23378-201ENSMUST00000082942 107 ntBASIC-0.49□□□□□ -2.49
Ccdc43Q9CR29 Gm25149-201ENSMUST00000157119 82 ntBASIC-0.51□□□□□ -2.49
Ccdc43Q9CR29 Gm22838-201ENSMUST00000158437 99 ntBASIC-0.51□□□□□ -2.49
Ccdc43Q9CR29 Mir1298-201ENSMUST00000116681 98 ntBASIC-0.52□□□□□ -2.49
Ccdc43Q9CR29 Gm25056-201ENSMUST00000157372 62 ntBASIC-0.52□□□□□ -2.49
Ccdc43Q9CR29 Gm26403-201ENSMUST00000158500 105 ntBASIC-0.52□□□□□ -2.49
Ccdc43Q9CR29 Gm44375-201ENSMUST00000196657 150 ntBASIC-0.52□□□□□ -2.49
Ccdc43Q9CR29 Gm23303-201ENSMUST00000082714 152 ntBASIC-0.52□□□□□ -2.49
Ccdc43Q9CR29 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC-0.52□□□□□ -2.49
Ccdc43Q9CR29 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC-0.53□□□□□ -2.49
Ccdc43Q9CR29 Gm23654-201ENSMUST00000116758 126 ntBASIC-0.53□□□□□ -2.49
Ccdc43Q9CR29 Gm14947-201ENSMUST00000133704 303 ntBASIC-0.53□□□□□ -2.49
Ccdc43Q9CR29 Gm26007-201ENSMUST00000158798 120 ntBASIC-0.53□□□□□ -2.49
Ccdc43Q9CR29 Gm22324-201ENSMUST00000158903 114 ntBASIC-0.53□□□□□ -2.49
Ccdc43Q9CR29 Snord80-202ENSMUST00000199023 77 ntBASIC-0.53□□□□□ -2.49
Ccdc43Q9CR29 AC124687.1-201ENSMUST00000221868 189 ntBASIC-0.53□□□□□ -2.49
Ccdc43Q9CR29 Mir327-201ENSMUST00000199328 69 ntBASIC-0.54□□□□□ -2.5
Ccdc43Q9CR29 Gm44922-201ENSMUST00000206690 90 ntBASIC-0.54□□□□□ -2.5
Ccdc43Q9CR29 Mir363-201ENSMUST00000093598 75 ntBASIC-0.54□□□□□ -2.5
Ccdc43Q9CR29 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC-0.55□□□□□ -2.5
Ccdc43Q9CR29 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC-0.55□□□□□ -2.5
Ccdc43Q9CR29 Gm17020-201ENSMUST00000172274 274 ntBASIC-0.55□□□□□ -2.5
Ccdc43Q9CR29 Gm25328-201ENSMUST00000175013 107 ntBASIC-0.55□□□□□ -2.5
Ccdc43Q9CR29 Gm25032-201ENSMUST00000175411 84 ntBASIC-0.55□□□□□ -2.5
Ccdc43Q9CR29 Gm37750-201ENSMUST00000193563 129 ntBASIC-0.55□□□□□ -2.5
Ccdc43Q9CR29 Gm25797-201ENSMUST00000082640 107 ntBASIC-0.55□□□□□ -2.5
Ccdc43Q9CR29 Mir21b-201ENSMUST00000184317 108 ntBASIC-0.56□□□□□ -2.5
Ccdc43Q9CR29 n-R5s39-201ENSMUST00000122613 108 ntBASIC-0.57□□□□□ -2.5
Ccdc43Q9CR29 Gm22966-201ENSMUST00000157957 129 ntBASIC-0.57□□□□□ -2.5
Ccdc43Q9CR29 Gm17528-201ENSMUST00000171026 239 ntBASIC-0.57□□□□□ -2.5
Ccdc43Q9CR29 Mir344-2-201ENSMUST00000175446 80 ntBASIC-0.57□□□□□ -2.5
Ccdc43Q9CR29 Gm22348-201ENSMUST00000178674 79 ntBASIC-0.57□□□□□ -2.5
Ccdc43Q9CR29 Gm27465-201ENSMUST00000184290 91 ntBASIC-0.57□□□□□ -2.5
Ccdc43Q9CR29 Gm23442-201ENSMUST00000082919 134 ntBASIC-0.57□□□□□ -2.5
Ccdc43Q9CR29 Gm23012-201ENSMUST00000104149 83 ntBASIC-0.58□□□□□ -2.5
Ccdc43Q9CR29 Gm37889-201ENSMUST00000194174 251 ntBASIC-0.58□□□□□ -2.5
Ccdc43Q9CR29 Gm45002-201ENSMUST00000208045 120 ntBASIC-0.58□□□□□ -2.5
Ccdc43Q9CR29 Gm26204-201ENSMUST00000082906 107 ntBASIC-0.58□□□□□ -2.5
Ccdc43Q9CR29 Gm21940-201ENSMUST00000204940 2278 ntBASIC-0.59□□□□□ -2.5
Ccdc43Q9CR29 Gm22105-201ENSMUST00000116734 116 ntBASIC-0.59□□□□□ -2.5
Ccdc43Q9CR29 Gm11644-201ENSMUST00000119735 150 ntBASIC-0.59□□□□□ -2.5
Ccdc43Q9CR29 Gm23901-201ENSMUST00000157570 107 ntBASIC-0.59□□□□□ -2.5
Ccdc43Q9CR29 Gm24843-201ENSMUST00000158682 76 ntBASIC-0.6□□□□□ -2.51
Ccdc43Q9CR29 Gm25366-201ENSMUST00000158845 124 ntBASIC-0.6□□□□□ -2.51
Ccdc43Q9CR29 Traj61-201ENSMUST00000165025 72 ntBASIC-0.6□□□□□ -2.51
Ccdc43Q9CR29 Gm23918-201ENSMUST00000175253 106 ntBASIC-0.6□□□□□ -2.51
Ccdc43Q9CR29 Gm23445-201ENSMUST00000082800 107 ntBASIC-0.6□□□□□ -2.51
Ccdc43Q9CR29 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC-0.61□□□□□ -2.51
Ccdc43Q9CR29 Gm23253-201ENSMUST00000157441 104 ntBASIC-0.61□□□□□ -2.51
Ccdc43Q9CR29 AC125190.3-201ENSMUST00000223224 121 ntBASIC-0.61□□□□□ -2.51
Ccdc43Q9CR29 Gm24524-201ENSMUST00000082925 170 ntBASIC-0.61□□□□□ -2.51
Ccdc43Q9CR29 Mir466b-8-201ENSMUST00000103883 86 ntBASIC-0.62□□□□□ -2.51
Ccdc43Q9CR29 Gm25509-201ENSMUST00000116985 106 ntBASIC-0.62□□□□□ -2.51
Ccdc43Q9CR29 Mir21c-201ENSMUST00000184910 78 ntBASIC-0.62□□□□□ -2.51
Ccdc43Q9CR29 Gm38295-201ENSMUST00000191951 151 ntBASIC-0.62□□□□□ -2.51
Ccdc43Q9CR29 Gm44409-201ENSMUST00000198810 166 ntBASIC-0.62□□□□□ -2.51
Ccdc43Q9CR29 Mir466e-201ENSMUST00000198862 84 ntBASIC-0.62□□□□□ -2.51
Ccdc43Q9CR29 Mir466c-1-201ENSMUST00000200654 84 ntBASIC-0.62□□□□□ -2.51
Ccdc43Q9CR29 Gm6607-201ENSMUST00000215035 328 ntBASIC-0.62□□□□□ -2.51
Ccdc43Q9CR29 Gm25482-201ENSMUST00000083225 107 ntBASIC-0.62□□□□□ -2.51
Ccdc43Q9CR29 Gm26421-201ENSMUST00000104279 132 ntBASIC-0.63□□□□□ -2.51
Ccdc43Q9CR29 Gm24522-201ENSMUST00000083964 108 ntBASIC-0.63□□□□□ -2.51
Ccdc43Q9CR29 Gm24374-201ENSMUST00000104394 106 ntBASIC-0.64□□□□□ -2.51
Retrieved 100 of 76,532 protein–RNA pairs in 161.7 ms