Protein–RNA interactions for Protein: Q91Y21

Pcdha1, Protocadherin alpha 1, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1Q91Y21 Gm23130-201ENSMUST00000104252 74 ntBASIC1.5□□□□□ -2.17
Pcdha1Q91Y21 Gm23881-201ENSMUST00000116872 66 ntBASIC1.5□□□□□ -2.17
Pcdha1Q91Y21 Gm23221-201ENSMUST00000158118 93 ntBASIC1.5□□□□□ -2.17
Pcdha1Q91Y21 Gm25901-201ENSMUST00000158494 130 ntBASIC1.5□□□□□ -2.17
Pcdha1Q91Y21 Gm24547-201ENSMUST00000158649 149 ntBASIC1.5□□□□□ -2.17
Pcdha1Q91Y21 Gm27493-201ENSMUST00000184128 78 ntBASIC1.5□□□□□ -2.17
Pcdha1Q91Y21 Gm25899-201ENSMUST00000082672 141 ntBASIC1.5□□□□□ -2.17
Pcdha1Q91Y21 Gm25110-201ENSMUST00000116684 121 ntBASIC1.49□□□□□ -2.17
Pcdha1Q91Y21 Gm25775-201ENSMUST00000116716 121 ntBASIC1.49□□□□□ -2.17
Pcdha1Q91Y21 Gm24795-201ENSMUST00000116737 121 ntBASIC1.49□□□□□ -2.17
Pcdha1Q91Y21 Gm25171-201ENSMUST00000116926 121 ntBASIC1.49□□□□□ -2.17
Pcdha1Q91Y21 Gm26253-201ENSMUST00000122493 103 ntBASIC1.49□□□□□ -2.17
Pcdha1Q91Y21 Gm24808-201ENSMUST00000157993 118 ntBASIC1.49□□□□□ -2.17
Pcdha1Q91Y21 Gm23339-201ENSMUST00000158962 139 ntBASIC1.49□□□□□ -2.17
Pcdha1Q91Y21 Gm22862-201ENSMUST00000178593 121 ntBASIC1.49□□□□□ -2.17
Pcdha1Q91Y21 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.49□□□□□ -2.17
Pcdha1Q91Y21 Gm23766-201ENSMUST00000103894 80 ntBASIC1.48□□□□□ -2.17
Pcdha1Q91Y21 Gm16265-201ENSMUST00000134558 108 ntBASIC1.48□□□□□ -2.17
Pcdha1Q91Y21 Gm22706-201ENSMUST00000157907 112 ntBASIC1.48□□□□□ -2.17
Pcdha1Q91Y21 Gm27265-201ENSMUST00000183559 77 ntBASIC1.48□□□□□ -2.17
Pcdha1Q91Y21 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.48□□□□□ -2.17
Pcdha1Q91Y21 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC1.47□□□□□ -2.17
Pcdha1Q91Y21 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.47□□□□□ -2.17
Pcdha1Q91Y21 Gm24476-201ENSMUST00000157437 131 ntBASIC1.47□□□□□ -2.17
Pcdha1Q91Y21 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Pcdha1Q91Y21 Gm43911-201ENSMUST00000203097 76 ntBASIC1.47□□□□□ -2.17
Pcdha1Q91Y21 AC166341.8-201ENSMUST00000221267 108 ntBASIC1.47□□□□□ -2.17
Pcdha1Q91Y21 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Pcdha1Q91Y21 Gm23336-201ENSMUST00000117023 123 ntBASIC1.46□□□□□ -2.18
Pcdha1Q91Y21 Mir6390-201ENSMUST00000184405 129 ntBASIC1.46□□□□□ -2.18
Pcdha1Q91Y21 AC140930.2-201ENSMUST00000221803 109 ntBASIC1.46□□□□□ -2.18
Pcdha1Q91Y21 Gm25851-201ENSMUST00000082794 107 ntBASIC1.46□□□□□ -2.18
Pcdha1Q91Y21 Gm26109-201ENSMUST00000083970 70 ntBASIC1.46□□□□□ -2.18
Pcdha1Q91Y21 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Pcdha1Q91Y21 Gm12469-201ENSMUST00000117623 207 ntBASIC1.45□□□□□ -2.18
Pcdha1Q91Y21 Gm24895-201ENSMUST00000122742 74 ntBASIC1.45□□□□□ -2.18
Pcdha1Q91Y21 Mir3083-201ENSMUST00000175377 64 ntBASIC1.45□□□□□ -2.18
Pcdha1Q91Y21 Gm27645-201ENSMUST00000183348 77 ntBASIC1.45□□□□□ -2.18
Pcdha1Q91Y21 Mir7665-201ENSMUST00000184907 63 ntBASIC1.45□□□□□ -2.18
Pcdha1Q91Y21 Gm22429-201ENSMUST00000158553 130 ntBASIC1.44□□□□□ -2.18
Pcdha1Q91Y21 Gm25618-201ENSMUST00000179484 107 ntBASIC1.44□□□□□ -2.18
Pcdha1Q91Y21 Gm36956-201ENSMUST00000193830 214 ntBASIC1.44□□□□□ -2.18
Pcdha1Q91Y21 Gm23344-201ENSMUST00000083818 68 ntBASIC1.44□□□□□ -2.18
Pcdha1Q91Y21 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.43□□□□□ -2.18
Pcdha1Q91Y21 Mir1933-201ENSMUST00000158930 88 ntBASIC1.43□□□□□ -2.18
Pcdha1Q91Y21 Gm10548-202ENSMUST00000165672 272 ntBASIC1.43□□□□□ -2.18
Pcdha1Q91Y21 Mir3098-201ENSMUST00000175416 87 ntBASIC1.43□□□□□ -2.18
Pcdha1Q91Y21 Gm27894-201ENSMUST00000184177 92 ntBASIC1.43□□□□□ -2.18
Pcdha1Q91Y21 Gm44469-201ENSMUST00000198558 79 ntBASIC1.43□□□□□ -2.18
Pcdha1Q91Y21 Gm26062-201ENSMUST00000083379 107 ntBASIC1.43□□□□□ -2.18
Pcdha1Q91Y21 Gm22753-201ENSMUST00000083657 107 ntBASIC1.43□□□□□ -2.18
Pcdha1Q91Y21 Gm25337-201ENSMUST00000083723 104 ntBASIC1.43□□□□□ -2.18
Pcdha1Q91Y21 Gm24271-201ENSMUST00000102327 111 ntBASIC1.42□□□□□ -2.18
Pcdha1Q91Y21 Gm25992-201ENSMUST00000102437 109 ntBASIC1.42□□□□□ -2.18
Pcdha1Q91Y21 Gm26274-201ENSMUST00000157103 321 ntBASIC1.42□□□□□ -2.18
Pcdha1Q91Y21 Gm22770-201ENSMUST00000158368 67 ntBASIC1.42□□□□□ -2.18
Pcdha1Q91Y21 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
Pcdha1Q91Y21 Gm25629-201ENSMUST00000084001 107 ntBASIC1.42□□□□□ -2.18
Pcdha1Q91Y21 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
Pcdha1Q91Y21 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Pcdha1Q91Y21 Gm11694-201ENSMUST00000118637 159 ntBASIC1.41□□□□□ -2.18
Pcdha1Q91Y21 Gm14884-201ENSMUST00000120456 196 ntBASIC1.41□□□□□ -2.18
Pcdha1Q91Y21 Mir8116-201ENSMUST00000184134 97 ntBASIC1.41□□□□□ -2.18
Pcdha1Q91Y21 Mir6962-201ENSMUST00000199512 63 ntBASIC1.41□□□□□ -2.18
Pcdha1Q91Y21 Gm44602-201ENSMUST00000205948 132 ntBASIC1.41□□□□□ -2.18
Pcdha1Q91Y21 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.18
Pcdha1Q91Y21 Gm26082-201ENSMUST00000104070 127 ntBASIC1.4□□□□□ -2.19
Pcdha1Q91Y21 Gm25289-201ENSMUST00000122799 119 ntBASIC1.4□□□□□ -2.19
Pcdha1Q91Y21 Gm22233-201ENSMUST00000157464 114 ntBASIC1.4□□□□□ -2.19
Pcdha1Q91Y21 Gm25868-201ENSMUST00000158253 114 ntBASIC1.4□□□□□ -2.19
Pcdha1Q91Y21 Gm27419-201ENSMUST00000184576 109 ntBASIC1.4□□□□□ -2.19
Pcdha1Q91Y21 Gm44488-201ENSMUST00000199467 119 ntBASIC1.4□□□□□ -2.19
Pcdha1Q91Y21 AC132833.2-201ENSMUST00000228699 157 ntBASIC1.4□□□□□ -2.19
Pcdha1Q91Y21 Gm25495-201ENSMUST00000104431 131 ntBASIC1.39□□□□□ -2.19
Pcdha1Q91Y21 Gm25968-201ENSMUST00000157167 100 ntBASIC1.39□□□□□ -2.19
Pcdha1Q91Y21 Gm23857-201ENSMUST00000158379 111 ntBASIC1.39□□□□□ -2.19
Pcdha1Q91Y21 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC1.39□□□□□ -2.19
Pcdha1Q91Y21 Gm14400-201ENSMUST00000117234 2135 ntBASIC1.39□□□□□ -2.19
Pcdha1Q91Y21 Mir343-201ENSMUST00000102360 75 ntBASIC1.38□□□□□ -2.19
Pcdha1Q91Y21 Gm11857-201ENSMUST00000119817 324 ntBASIC1.38□□□□□ -2.19
Pcdha1Q91Y21 Gm24399-201ENSMUST00000157869 74 ntBASIC1.38□□□□□ -2.19
Pcdha1Q91Y21 Gm25014-201ENSMUST00000158401 103 ntBASIC1.38□□□□□ -2.19
Pcdha1Q91Y21 Gm24129-201ENSMUST00000158537 97 ntBASIC1.38□□□□□ -2.19
Pcdha1Q91Y21 Gm26466-201ENSMUST00000179615 79 ntBASIC1.38□□□□□ -2.19
Pcdha1Q91Y21 Gm27993-201ENSMUST00000184362 85 ntBASIC1.38□□□□□ -2.19
Pcdha1Q91Y21 mt-Tc-201ENSMUST00000082400 66 ntBASIC1.38□□□□□ -2.19
Pcdha1Q91Y21 Gm24311-201ENSMUST00000082570 104 ntBASIC1.38□□□□□ -2.19
Pcdha1Q91Y21 Gm25128-201ENSMUST00000083339 76 ntBASIC1.38□□□□□ -2.19
Pcdha1Q91Y21 Gm22544-201ENSMUST00000104349 127 ntBASIC1.37□□□□□ -2.19
Pcdha1Q91Y21 n-R5s157-201ENSMUST00000122543 121 ntBASIC1.37□□□□□ -2.19
Pcdha1Q91Y21 Gm23900-201ENSMUST00000157569 108 ntBASIC1.37□□□□□ -2.19
Pcdha1Q91Y21 Gm22515-201ENSMUST00000158273 305 ntBASIC1.37□□□□□ -2.19
Pcdha1Q91Y21 Mir6240-201ENSMUST00000184281 117 ntBASIC1.37□□□□□ -2.19
Pcdha1Q91Y21 Gm43944-201ENSMUST00000205220 120 ntBASIC1.37□□□□□ -2.19
Pcdha1Q91Y21 Gm23790-201ENSMUST00000083013 107 ntBASIC1.37□□□□□ -2.19
Pcdha1Q91Y21 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
Pcdha1Q91Y21 Gm23482-201ENSMUST00000104172 122 ntBASIC1.36□□□□□ -2.19
Pcdha1Q91Y21 Gm24379-201ENSMUST00000122695 86 ntBASIC1.36□□□□□ -2.19
Pcdha1Q91Y21 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC1.36□□□□□ -2.19
Pcdha1Q91Y21 Gm26133-201ENSMUST00000157363 100 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 138.6 ms