Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Gm22784-201ENSMUST00000104088 132 ntBASIC-0.99□□□□□ -2.57
Cspg4Q8VHY0 Gm11388-201ENSMUST00000120908 159 ntBASIC-0.99□□□□□ -2.57
Cspg4Q8VHY0 Gm23958-201ENSMUST00000157207 105 ntBASIC-0.99□□□□□ -2.57
Cspg4Q8VHY0 Gm24913-201ENSMUST00000157286 107 ntBASIC-0.99□□□□□ -2.57
Cspg4Q8VHY0 Gm25184-201ENSMUST00000157753 163 ntBASIC-0.99□□□□□ -2.57
Cspg4Q8VHY0 Mir23a-201ENSMUST00000083677 75 ntBASIC-0.99□□□□□ -2.57
Cspg4Q8VHY0 Gm24867-201ENSMUST00000104161 107 ntBASIC-0.99□□□□□ -2.57
Cspg4Q8VHY0 Gm22612-201ENSMUST00000158293 101 ntBASIC-0.99□□□□□ -2.57
Cspg4Q8VHY0 Gm23352-201ENSMUST00000158428 64 ntBASIC-0.99□□□□□ -2.57
Cspg4Q8VHY0 Gm24003-201ENSMUST00000158455 100 ntBASIC-0.99□□□□□ -2.57
Cspg4Q8VHY0 Gm23515-201ENSMUST00000082829 107 ntBASIC-0.99□□□□□ -2.57
Cspg4Q8VHY0 Gm23845-201ENSMUST00000083834 152 ntBASIC-0.99□□□□□ -2.57
Cspg4Q8VHY0 Gm22051-201ENSMUST00000117002 127 ntBASIC-1□□□□□ -2.57
Cspg4Q8VHY0 Gm12924-201ENSMUST00000121747 318 ntBASIC-1□□□□□ -2.57
Cspg4Q8VHY0 Gm26360-201ENSMUST00000158872 103 ntBASIC-1□□□□□ -2.57
Cspg4Q8VHY0 Gm38213-201ENSMUST00000193203 173 ntBASIC-1□□□□□ -2.57
Cspg4Q8VHY0 Gm43810-201ENSMUST00000201018 232 ntBASIC-1□□□□□ -2.57
Cspg4Q8VHY0 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC-1□□□□□ -2.57
Cspg4Q8VHY0 AC116589.3-202ENSMUST00000221770 649 ntBASIC-1□□□□□ -2.57
Cspg4Q8VHY0 AC116589.6-201ENSMUST00000222252 649 ntBASIC-1□□□□□ -2.57
Cspg4Q8VHY0 Gm26293-201ENSMUST00000104170 84 ntBASIC-1□□□□□ -2.57
Cspg4Q8VHY0 Gm22720-201ENSMUST00000122710 87 ntBASIC-1□□□□□ -2.57
Cspg4Q8VHY0 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC-1□□□□□ -2.57
Cspg4Q8VHY0 Mir1839-201ENSMUST00000175366 127 ntBASIC-1□□□□□ -2.57
Cspg4Q8VHY0 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC-1□□□□□ -2.57
Cspg4Q8VHY0 Gm24856-201ENSMUST00000082809 107 ntBASIC-1□□□□□ -2.57
Cspg4Q8VHY0 Gm24453-201ENSMUST00000083346 76 ntBASIC-1□□□□□ -2.57
Cspg4Q8VHY0 Gm24701-201ENSMUST00000101946 105 ntBASIC-1.01□□□□□ -2.57
Cspg4Q8VHY0 Gm25275-201ENSMUST00000104297 129 ntBASIC-1.01□□□□□ -2.57
Cspg4Q8VHY0 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC-1.01□□□□□ -2.57
Cspg4Q8VHY0 Gm42677-201ENSMUST00000196363 127 ntBASIC-1.01□□□□□ -2.57
Cspg4Q8VHY0 Gm29818-201ENSMUST00000218070 165 ntBASIC-1.01□□□□□ -2.57
Cspg4Q8VHY0 AC134601.1-201ENSMUST00000221058 109 ntBASIC-1.01□□□□□ -2.57
Cspg4Q8VHY0 Gm26164-201ENSMUST00000083793 104 ntBASIC-1.01□□□□□ -2.57
Cspg4Q8VHY0 Gm23941-201ENSMUST00000101953 107 ntBASIC-1.01□□□□□ -2.57
Cspg4Q8VHY0 Gm23320-201ENSMUST00000104462 127 ntBASIC-1.01□□□□□ -2.57
Cspg4Q8VHY0 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC-1.01□□□□□ -2.57
Cspg4Q8VHY0 Gm26478-201ENSMUST00000122611 133 ntBASIC-1.01□□□□□ -2.57
Cspg4Q8VHY0 Gm22638-201ENSMUST00000179674 107 ntBASIC-1.01□□□□□ -2.57
Cspg4Q8VHY0 Gm22079-201ENSMUST00000157592 106 ntBASIC-1.02□□□□□ -2.57
Cspg4Q8VHY0 Gm23145-201ENSMUST00000178912 79 ntBASIC-1.02□□□□□ -2.57
Cspg4Q8VHY0 Gm22571-201ENSMUST00000082984 70 ntBASIC-1.02□□□□□ -2.57
Cspg4Q8VHY0 Gm26482-201ENSMUST00000158015 62 ntBASIC-1.03□□□□□ -2.57
Cspg4Q8VHY0 Gm25653-201ENSMUST00000158473 138 ntBASIC-1.03□□□□□ -2.57
Cspg4Q8VHY0 Gm25364-201ENSMUST00000158851 107 ntBASIC-1.03□□□□□ -2.57
Cspg4Q8VHY0 Gm24315-201ENSMUST00000177835 127 ntBASIC-1.03□□□□□ -2.57
Cspg4Q8VHY0 Zfp950-206ENSMUST00000178819 171 ntBASIC-1.03□□□□□ -2.57
Cspg4Q8VHY0 AC132918.1-201ENSMUST00000227877 925 ntBASIC-1.03□□□□□ -2.57
Cspg4Q8VHY0 Snord16a-201ENSMUST00000083895 99 ntBASIC-1.03□□□□□ -2.57
Cspg4Q8VHY0 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC-1.03□□□□□ -2.57
Cspg4Q8VHY0 Mup-ps5-201ENSMUST00000118667 99 ntBASIC-1.03□□□□□ -2.57
Cspg4Q8VHY0 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC-1.03□□□□□ -2.57
Cspg4Q8VHY0 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC-1.03□□□□□ -2.57
Cspg4Q8VHY0 Mir6928-201ENSMUST00000185166 70 ntBASIC-1.03□□□□□ -2.57
Cspg4Q8VHY0 Mir489-201ENSMUST00000093599 107 ntBASIC-1.03□□□□□ -2.57
Cspg4Q8VHY0 Gm26420-201ENSMUST00000104273 103 ntBASIC-1.04□□□□□ -2.58
Cspg4Q8VHY0 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.04□□□□□ -2.58
Cspg4Q8VHY0 AC145736.2-201ENSMUST00000216305 365 ntBASIC-1.04□□□□□ -2.58
Cspg4Q8VHY0 AC192333.1-201ENSMUST00000224573 376 ntBASIC-1.04□□□□□ -2.58
Cspg4Q8VHY0 Gm24918-201ENSMUST00000083022 130 ntBASIC-1.04□□□□□ -2.58
Cspg4Q8VHY0 Gm23987-201ENSMUST00000117039 129 ntBASIC-1.04□□□□□ -2.58
Cspg4Q8VHY0 Gm23212-201ENSMUST00000122718 60 ntBASIC-1.04□□□□□ -2.58
Cspg4Q8VHY0 Gm27659-201ENSMUST00000183472 98 ntBASIC-1.04□□□□□ -2.58
Cspg4Q8VHY0 Gm22790-201ENSMUST00000157229 129 ntBASIC-1.05□□□□□ -2.58
Cspg4Q8VHY0 Mir509-201ENSMUST00000196089 75 ntBASIC-1.05□□□□□ -2.58
Cspg4Q8VHY0 Gm23344-201ENSMUST00000083818 68 ntBASIC-1.05□□□□□ -2.58
Cspg4Q8VHY0 Gm22212-201ENSMUST00000158096 106 ntBASIC-1.05□□□□□ -2.58
Cspg4Q8VHY0 Gm25223-201ENSMUST00000158200 110 ntBASIC-1.05□□□□□ -2.58
Cspg4Q8VHY0 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC-1.05□□□□□ -2.58
Cspg4Q8VHY0 Mir706-201ENSMUST00000102262 84 ntBASIC-1.06□□□□□ -2.58
Cspg4Q8VHY0 Mir190b-201ENSMUST00000104803 80 ntBASIC-1.06□□□□□ -2.58
Cspg4Q8VHY0 Gm22850-201ENSMUST00000157714 82 ntBASIC-1.06□□□□□ -2.58
Cspg4Q8VHY0 Gm22841-201ENSMUST00000158443 62 ntBASIC-1.06□□□□□ -2.58
Cspg4Q8VHY0 Gm24580-201ENSMUST00000103965 131 ntBASIC-1.06□□□□□ -2.58
Cspg4Q8VHY0 Mir669h-201ENSMUST00000116944 125 ntBASIC-1.06□□□□□ -2.58
Cspg4Q8VHY0 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC-1.06□□□□□ -2.58
Cspg4Q8VHY0 Gm25267-201ENSMUST00000158522 63 ntBASIC-1.06□□□□□ -2.58
Cspg4Q8VHY0 Gm27919-201ENSMUST00000185163 107 ntBASIC-1.06□□□□□ -2.58
Cspg4Q8VHY0 Mir466b-7-201ENSMUST00000103804 88 ntBASIC-1.07□□□□□ -2.58
Cspg4Q8VHY0 Mir466b-5-201ENSMUST00000103900 88 ntBASIC-1.07□□□□□ -2.58
Cspg4Q8VHY0 Gm24232-201ENSMUST00000104314 132 ntBASIC-1.07□□□□□ -2.58
Cspg4Q8VHY0 Gm23494-201ENSMUST00000116830 126 ntBASIC-1.07□□□□□ -2.58
Cspg4Q8VHY0 Gm16362-201ENSMUST00000135189 214 ntBASIC-1.07□□□□□ -2.58
Cspg4Q8VHY0 Gm24111-201ENSMUST00000175491 97 ntBASIC-1.07□□□□□ -2.58
Cspg4Q8VHY0 AL603630.1-201ENSMUST00000214781 147 ntBASIC-1.07□□□□□ -2.58
Cspg4Q8VHY0 Gm23722-201ENSMUST00000083002 130 ntBASIC-1.07□□□□□ -2.58
Cspg4Q8VHY0 Gm26104-201ENSMUST00000157250 108 ntBASIC-1.07□□□□□ -2.58
Cspg4Q8VHY0 Gm23500-201ENSMUST00000157735 98 ntBASIC-1.07□□□□□ -2.58
Cspg4Q8VHY0 Mir582-201ENSMUST00000103758 81 ntBASIC-1.08□□□□□ -2.58
Cspg4Q8VHY0 Gm23214-201ENSMUST00000122716 157 ntBASIC-1.08□□□□□ -2.58
Cspg4Q8VHY0 Gm25024-201ENSMUST00000179667 104 ntBASIC-1.08□□□□□ -2.58
Cspg4Q8VHY0 Gm27285-201ENSMUST00000183875 127 ntBASIC-1.08□□□□□ -2.58
Cspg4Q8VHY0 Gm44589-201ENSMUST00000207025 115 ntBASIC-1.08□□□□□ -2.58
Cspg4Q8VHY0 Gm22305-201ENSMUST00000082690 108 ntBASIC-1.08□□□□□ -2.58
Cspg4Q8VHY0 Gm23909-201ENSMUST00000104598 131 ntBASIC-1.09□□□□□ -2.58
Cspg4Q8VHY0 Gm12584-201ENSMUST00000117109 1105 ntBASIC-1.09□□□□□ -2.58
Cspg4Q8VHY0 Gm24204-201ENSMUST00000082950 107 ntBASIC-1.09□□□□□ -2.58
Cspg4Q8VHY0 Gm23097-201ENSMUST00000083448 105 ntBASIC-1.09□□□□□ -2.58
Cspg4Q8VHY0 Gm12748-201ENSMUST00000120763 504 ntBASIC-1.09□□□□□ -2.58
Cspg4Q8VHY0 Gm25314-201ENSMUST00000178810 79 ntBASIC-1.09□□□□□ -2.58
Retrieved 100 of 76,532 protein–RNA pairs in 139.6 ms