Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm22973-201ENSMUST00000083298 191 ntBASIC0.38□□□□□ -2.35
Nup88Q8CEC0 Gm26011-201ENSMUST00000104410 104 ntBASIC0.37□□□□□ -2.35
Nup88Q8CEC0 Gm22195-201ENSMUST00000116861 108 ntBASIC0.37□□□□□ -2.35
Nup88Q8CEC0 Gm25885-201ENSMUST00000157779 109 ntBASIC0.37□□□□□ -2.35
Nup88Q8CEC0 Gm25716-201ENSMUST00000158628 104 ntBASIC0.37□□□□□ -2.35
Nup88Q8CEC0 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
Nup88Q8CEC0 Gm44338-201ENSMUST00000198614 110 ntBASIC0.37□□□□□ -2.35
Nup88Q8CEC0 Gm22541-201ENSMUST00000158165 127 ntBASIC0.36□□□□□ -2.35
Nup88Q8CEC0 Gm22239-201ENSMUST00000175220 103 ntBASIC0.36□□□□□ -2.35
Nup88Q8CEC0 Gm24321-201ENSMUST00000175348 80 ntBASIC0.36□□□□□ -2.35
Nup88Q8CEC0 Gm27943-201ENSMUST00000184844 116 ntBASIC0.36□□□□□ -2.35
Nup88Q8CEC0 Gm29535-201ENSMUST00000185723 109 ntBASIC0.36□□□□□ -2.35
Nup88Q8CEC0 Gm28143-201ENSMUST00000191082 109 ntBASIC0.36□□□□□ -2.35
Nup88Q8CEC0 Gm23445-201ENSMUST00000082800 107 ntBASIC0.36□□□□□ -2.35
Nup88Q8CEC0 Mir710-201ENSMUST00000102088 110 ntBASIC0.35□□□□□ -2.35
Nup88Q8CEC0 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC0.35□□□□□ -2.35
Nup88Q8CEC0 Gm23990-201ENSMUST00000117031 117 ntBASIC0.35□□□□□ -2.35
Nup88Q8CEC0 Gm26152-201ENSMUST00000157427 101 ntBASIC0.35□□□□□ -2.35
Nup88Q8CEC0 Gm23020-201ENSMUST00000158766 253 ntBASIC0.35□□□□□ -2.35
Nup88Q8CEC0 Gm25894-201ENSMUST00000083458 75 ntBASIC0.35□□□□□ -2.35
Nup88Q8CEC0 Mir141-201ENSMUST00000083540 72 ntBASIC0.35□□□□□ -2.35
Nup88Q8CEC0 Gm23947-201ENSMUST00000093636 107 ntBASIC0.35□□□□□ -2.35
Nup88Q8CEC0 Gm25316-201ENSMUST00000116826 118 ntBASIC0.34□□□□□ -2.36
Nup88Q8CEC0 Gm23253-201ENSMUST00000157441 104 ntBASIC0.34□□□□□ -2.36
Nup88Q8CEC0 Gm27475-201ENSMUST00000183420 61 ntBASIC0.34□□□□□ -2.36
Nup88Q8CEC0 Mir7065-201ENSMUST00000185110 61 ntBASIC0.34□□□□□ -2.36
Nup88Q8CEC0 Mirlet7g-201ENSMUST00000083506 88 ntBASIC0.34□□□□□ -2.36
Nup88Q8CEC0 Gm22030-201ENSMUST00000116942 63 ntBASIC0.33□□□□□ -2.36
Nup88Q8CEC0 Gm26398-201ENSMUST00000179015 127 ntBASIC0.33□□□□□ -2.36
Nup88Q8CEC0 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.33□□□□□ -2.36
Nup88Q8CEC0 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.33□□□□□ -2.36
Nup88Q8CEC0 Gm24750-201ENSMUST00000157843 104 ntBASIC0.32□□□□□ -2.36
Nup88Q8CEC0 Gm23337-201ENSMUST00000158959 118 ntBASIC0.32□□□□□ -2.36
Nup88Q8CEC0 Gm45265-201ENSMUST00000210852 2497 ntBASIC0.31□□□□□ -2.36
Nup88Q8CEC0 Gm25943-201ENSMUST00000103791 90 ntBASIC0.31□□□□□ -2.36
Nup88Q8CEC0 Mir466b-7-201ENSMUST00000103804 88 ntBASIC0.31□□□□□ -2.36
Nup88Q8CEC0 Mir466b-5-201ENSMUST00000103900 88 ntBASIC0.31□□□□□ -2.36
Nup88Q8CEC0 Gm25600-201ENSMUST00000158357 106 ntBASIC0.31□□□□□ -2.36
Nup88Q8CEC0 Gm26290-201ENSMUST00000158891 145 ntBASIC0.31□□□□□ -2.36
Nup88Q8CEC0 Mir466b-4-201ENSMUST00000178801 90 ntBASIC0.31□□□□□ -2.36
Nup88Q8CEC0 Gm25285-201ENSMUST00000178951 90 ntBASIC0.31□□□□□ -2.36
Nup88Q8CEC0 Mir466b-6-201ENSMUST00000180061 90 ntBASIC0.31□□□□□ -2.36
Nup88Q8CEC0 Mir466c-2-201ENSMUST00000180211 90 ntBASIC0.31□□□□□ -2.36
Nup88Q8CEC0 Mir1949-202ENSMUST00000199259 70 ntBASIC0.31□□□□□ -2.36
Nup88Q8CEC0 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.31□□□□□ -2.36
Nup88Q8CEC0 Snord90-201ENSMUST00000104568 111 ntBASIC0.3□□□□□ -2.36
Nup88Q8CEC0 Gm24106-201ENSMUST00000175498 127 ntBASIC0.3□□□□□ -2.36
Nup88Q8CEC0 Mir376b-201ENSMUST00000195930 82 ntBASIC0.3□□□□□ -2.36
Nup88Q8CEC0 Gm22169-201ENSMUST00000083229 107 ntBASIC0.3□□□□□ -2.36
Nup88Q8CEC0 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.29□□□□□ -2.36
Nup88Q8CEC0 Gm24246-201ENSMUST00000157315 132 ntBASIC0.29□□□□□ -2.36
Nup88Q8CEC0 Gm24278-201ENSMUST00000104239 127 ntBASIC0.28□□□□□ -2.36
Nup88Q8CEC0 Gm24833-201ENSMUST00000116775 120 ntBASIC0.28□□□□□ -2.36
Nup88Q8CEC0 Gm13065-201ENSMUST00000119178 141 ntBASIC0.28□□□□□ -2.36
Nup88Q8CEC0 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC0.28□□□□□ -2.36
Nup88Q8CEC0 Scarna8-201ENSMUST00000158333 131 ntBASIC0.28□□□□□ -2.36
Nup88Q8CEC0 Gm24793-201ENSMUST00000104289 132 ntBASIC0.27□□□□□ -2.37
Nup88Q8CEC0 Gm16186-201ENSMUST00000120132 216 ntBASIC0.27□□□□□ -2.37
Nup88Q8CEC0 Mir3105-201ENSMUST00000175480 85 ntBASIC0.27□□□□□ -2.37
Nup88Q8CEC0 Snora75-201ENSMUST00000082903 133 ntBASIC0.27□□□□□ -2.37
Nup88Q8CEC0 Gm25410-201ENSMUST00000083758 137 ntBASIC0.27□□□□□ -2.37
Nup88Q8CEC0 Gm27717-201ENSMUST00000183933 151 ntBASIC0.26□□□□□ -2.37
Nup88Q8CEC0 Gm26207-201ENSMUST00000082909 104 ntBASIC0.26□□□□□ -2.37
Nup88Q8CEC0 Gm24129-201ENSMUST00000158537 97 ntBASIC0.25□□□□□ -2.37
Nup88Q8CEC0 Gm23036-201ENSMUST00000157885 99 ntBASIC0.24□□□□□ -2.37
Nup88Q8CEC0 Mir3089-201ENSMUST00000175350 84 ntBASIC0.24□□□□□ -2.37
Nup88Q8CEC0 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC0.24□□□□□ -2.37
Nup88Q8CEC0 Gm23749-201ENSMUST00000104223 131 ntBASIC0.23□□□□□ -2.37
Nup88Q8CEC0 Gm24718-201ENSMUST00000157521 136 ntBASIC0.23□□□□□ -2.37
Nup88Q8CEC0 Mir6904-201ENSMUST00000183443 67 ntBASIC0.23□□□□□ -2.37
Nup88Q8CEC0 Gm25797-201ENSMUST00000082640 107 ntBASIC0.23□□□□□ -2.37
Nup88Q8CEC0 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC0.22□□□□□ -2.37
Nup88Q8CEC0 Gm24381-201ENSMUST00000122697 104 ntBASIC0.22□□□□□ -2.37
Nup88Q8CEC0 Mir6365-201ENSMUST00000183990 101 ntBASIC0.22□□□□□ -2.37
Nup88Q8CEC0 Ighv15-1-201ENSMUST00000194450 276 ntBASIC0.22□□□□□ -2.37
Nup88Q8CEC0 Gm25040-201ENSMUST00000103877 66 ntBASIC0.21□□□□□ -2.38
Nup88Q8CEC0 Gm26084-201ENSMUST00000157903 104 ntBASIC0.21□□□□□ -2.38
Nup88Q8CEC0 Traj61-201ENSMUST00000165025 72 ntBASIC0.21□□□□□ -2.38
Nup88Q8CEC0 Mir3108-201ENSMUST00000175500 79 ntBASIC0.21□□□□□ -2.38
Nup88Q8CEC0 Mir7116-201ENSMUST00000195956 70 ntBASIC0.21□□□□□ -2.38
Nup88Q8CEC0 Gm22303-201ENSMUST00000082686 122 ntBASIC0.21□□□□□ -2.38
Nup88Q8CEC0 Gm24461-201ENSMUST00000082735 103 ntBASIC0.21□□□□□ -2.38
Nup88Q8CEC0 Gm25629-201ENSMUST00000084001 107 ntBASIC0.21□□□□□ -2.38
Nup88Q8CEC0 Mir670-201ENSMUST00000102380 100 ntBASIC0.2□□□□□ -2.38
Nup88Q8CEC0 Snord72-201ENSMUST00000104549 81 ntBASIC0.2□□□□□ -2.38
Nup88Q8CEC0 Gm26091-201ENSMUST00000122704 82 ntBASIC0.2□□□□□ -2.38
Nup88Q8CEC0 Gm25056-201ENSMUST00000157372 62 ntBASIC0.2□□□□□ -2.38
Nup88Q8CEC0 Gm25060-201ENSMUST00000157374 130 ntBASIC0.2□□□□□ -2.38
Nup88Q8CEC0 Gm25974-201ENSMUST00000158701 94 ntBASIC0.2□□□□□ -2.38
Nup88Q8CEC0 Gm23504-201ENSMUST00000158988 95 ntBASIC0.2□□□□□ -2.38
Nup88Q8CEC0 Gm18502-201ENSMUST00000218679 199 ntBASIC0.2□□□□□ -2.38
Nup88Q8CEC0 Gm22652-201ENSMUST00000083207 131 ntBASIC0.2□□□□□ -2.38
Nup88Q8CEC0 Gm24233-201ENSMUST00000104317 122 ntBASIC0.19□□□□□ -2.38
Nup88Q8CEC0 Gm44602-201ENSMUST00000205948 132 ntBASIC0.19□□□□□ -2.38
Nup88Q8CEC0 Mir764-201ENSMUST00000103259 108 ntBASIC0.16□□□□□ -2.38
Nup88Q8CEC0 Gm25408-201ENSMUST00000104104 133 ntBASIC0.16□□□□□ -2.38
Nup88Q8CEC0 Gm25952-201ENSMUST00000175329 74 ntBASIC0.16□□□□□ -2.38
Nup88Q8CEC0 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC0.16□□□□□ -2.38
Nup88Q8CEC0 Snord95-201ENSMUST00000082846 68 ntBASIC0.16□□□□□ -2.38
Nup88Q8CEC0 Gm23661-201ENSMUST00000122630 87 ntBASIC0.15□□□□□ -2.39
Retrieved 100 of 76,532 protein–RNA pairs in 175.3 ms