Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm16550-201ENSMUST00000162550 126 ntBASIC2.1□□□□□ -2.07
Usp40Q8BWR4 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC2.1□□□□□ -2.07
Usp40Q8BWR4 Gm24783-201ENSMUST00000157639 100 ntBASIC2.09□□□□□ -2.07
Usp40Q8BWR4 Gm25014-201ENSMUST00000158401 103 ntBASIC2.09□□□□□ -2.07
Usp40Q8BWR4 Gm20477-201ENSMUST00000174028 280 ntBASIC2.09□□□□□ -2.07
Usp40Q8BWR4 Gm23726-201ENSMUST00000178937 67 ntBASIC2.09□□□□□ -2.07
Usp40Q8BWR4 Gm27493-201ENSMUST00000184128 78 ntBASIC2.09□□□□□ -2.07
Usp40Q8BWR4 Gm43865-201ENSMUST00000204721 127 ntBASIC2.09□□□□□ -2.07
Usp40Q8BWR4 Gm24406-201ENSMUST00000083026 128 ntBASIC2.09□□□□□ -2.07
Usp40Q8BWR4 Gm22884-201ENSMUST00000083127 140 ntBASIC2.09□□□□□ -2.07
Usp40Q8BWR4 Mir532-201ENSMUST00000093630 96 ntBASIC2.09□□□□□ -2.07
Usp40Q8BWR4 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC2.09□□□□□ -2.08
Usp40Q8BWR4 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Usp40Q8BWR4 Mir20b-201ENSMUST00000102087 80 ntBASIC2.08□□□□□ -2.08
Usp40Q8BWR4 Gm25011-201ENSMUST00000158398 126 ntBASIC2.08□□□□□ -2.08
Usp40Q8BWR4 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.08□□□□□ -2.08
Usp40Q8BWR4 Gm23306-201ENSMUST00000179058 105 ntBASIC2.08□□□□□ -2.08
Usp40Q8BWR4 Gm27248-201ENSMUST00000184004 166 ntBASIC2.08□□□□□ -2.08
Usp40Q8BWR4 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC2.08□□□□□ -2.08
Usp40Q8BWR4 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC2.08□□□□□ -2.08
Usp40Q8BWR4 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC2.08□□□□□ -2.08
Usp40Q8BWR4 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC2.08□□□□□ -2.08
Usp40Q8BWR4 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC2.08□□□□□ -2.08
Usp40Q8BWR4 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC2.08□□□□□ -2.08
Usp40Q8BWR4 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC2.08□□□□□ -2.08
Usp40Q8BWR4 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC2.08□□□□□ -2.08
Usp40Q8BWR4 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC2.08□□□□□ -2.08
Usp40Q8BWR4 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC2.08□□□□□ -2.08
Usp40Q8BWR4 Gm26062-201ENSMUST00000083379 107 ntBASIC2.08□□□□□ -2.08
Usp40Q8BWR4 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Usp40Q8BWR4 Gm19194-201ENSMUST00000192015 3774 ntBASIC2.08□□□□□ -2.08
Usp40Q8BWR4 Gm24396-201ENSMUST00000116905 93 ntBASIC2.07□□□□□ -2.08
Usp40Q8BWR4 Gm23122-201ENSMUST00000157645 103 ntBASIC2.07□□□□□ -2.08
Usp40Q8BWR4 Gm25949-201ENSMUST00000175333 114 ntBASIC2.07□□□□□ -2.08
Usp40Q8BWR4 AC158537.2-201ENSMUST00000223575 150 ntBASIC2.07□□□□□ -2.08
Usp40Q8BWR4 AC164629.4-201ENSMUST00000218505 3247 ntBASIC2.07□□□□□ -2.08
Usp40Q8BWR4 Scarna9-201ENSMUST00000104318 70 ntBASIC2.06□□□□□ -2.08
Usp40Q8BWR4 Mir654-201ENSMUST00000104787 84 ntBASIC2.06□□□□□ -2.08
Usp40Q8BWR4 Gm24509-201ENSMUST00000157086 101 ntBASIC2.06□□□□□ -2.08
Usp40Q8BWR4 Gm25358-201ENSMUST00000157189 101 ntBASIC2.06□□□□□ -2.08
Usp40Q8BWR4 Gm25901-201ENSMUST00000158494 130 ntBASIC2.06□□□□□ -2.08
Usp40Q8BWR4 Gm24223-201ENSMUST00000158827 90 ntBASIC2.06□□□□□ -2.08
Usp40Q8BWR4 Snora24-201ENSMUST00000174989 130 ntBASIC2.06□□□□□ -2.08
Usp40Q8BWR4 Gm26499-201ENSMUST00000178544 79 ntBASIC2.06□□□□□ -2.08
Usp40Q8BWR4 Gm26096-201ENSMUST00000179084 79 ntBASIC2.06□□□□□ -2.08
Usp40Q8BWR4 Gm25798-201ENSMUST00000082641 107 ntBASIC2.06□□□□□ -2.08
Usp40Q8BWR4 Mir30d-201ENSMUST00000083503 82 ntBASIC2.06□□□□□ -2.08
Usp40Q8BWR4 AC139186.1-201ENSMUST00000197610 94 ntBASIC2.05□□□□□ -2.08
Usp40Q8BWR4 Gm23336-201ENSMUST00000117023 123 ntBASIC2.04□□□□□ -2.08
Usp40Q8BWR4 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC2.04□□□□□ -2.08
Usp40Q8BWR4 Gm25994-201ENSMUST00000175392 101 ntBASIC2.04□□□□□ -2.08
Usp40Q8BWR4 Gm27326-201ENSMUST00000183504 95 ntBASIC2.04□□□□□ -2.08
Usp40Q8BWR4 Gm28256-201ENSMUST00000188953 139 ntBASIC2.04□□□□□ -2.08
Usp40Q8BWR4 Gm28559-201ENSMUST00000190532 139 ntBASIC2.04□□□□□ -2.08
Usp40Q8BWR4 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Usp40Q8BWR4 Gm26207-201ENSMUST00000082909 104 ntBASIC2.04□□□□□ -2.08
Usp40Q8BWR4 Gm23482-201ENSMUST00000104172 122 ntBASIC2.03□□□□□ -2.08
Usp40Q8BWR4 Gm22494-201ENSMUST00000104495 128 ntBASIC2.03□□□□□ -2.08
Usp40Q8BWR4 Mir1191-201ENSMUST00000116883 120 ntBASIC2.03□□□□□ -2.08
Usp40Q8BWR4 Gm23469-201ENSMUST00000157131 104 ntBASIC2.03□□□□□ -2.08
Usp40Q8BWR4 Gm24686-201ENSMUST00000157755 93 ntBASIC2.03□□□□□ -2.08
Usp40Q8BWR4 Mir6351-201ENSMUST00000183826 99 ntBASIC2.03□□□□□ -2.08
Usp40Q8BWR4 Snord43-201ENSMUST00000199549 108 ntBASIC2.03□□□□□ -2.08
Usp40Q8BWR4 Mir151-201ENSMUST00000083678 68 ntBASIC2.03□□□□□ -2.08
Usp40Q8BWR4 Gm11694-201ENSMUST00000118637 159 ntBASIC2.02□□□□□ -2.09
Usp40Q8BWR4 Gm14039-201ENSMUST00000118705 101 ntBASIC2.02□□□□□ -2.09
Usp40Q8BWR4 Gm23900-201ENSMUST00000157569 108 ntBASIC2.02□□□□□ -2.09
Usp40Q8BWR4 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Usp40Q8BWR4 Gm21885-201ENSMUST00000178891 327 ntBASIC2.02□□□□□ -2.09
Usp40Q8BWR4 Gm25870-201ENSMUST00000179845 79 ntBASIC2.02□□□□□ -2.09
Usp40Q8BWR4 Mir7665-201ENSMUST00000184907 63 ntBASIC2.02□□□□□ -2.09
Usp40Q8BWR4 AC157602.1-201ENSMUST00000197446 105 ntBASIC2.02□□□□□ -2.09
Usp40Q8BWR4 Gm44602-201ENSMUST00000205948 132 ntBASIC2.02□□□□□ -2.09
Usp40Q8BWR4 Gm24588-201ENSMUST00000116696 83 ntBASIC2.01□□□□□ -2.09
Usp40Q8BWR4 Gm24378-201ENSMUST00000122699 106 ntBASIC2.01□□□□□ -2.09
Usp40Q8BWR4 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC2.01□□□□□ -2.09
Usp40Q8BWR4 Gm22944-201ENSMUST00000158662 133 ntBASIC2.01□□□□□ -2.09
Usp40Q8BWR4 Mir3086-201ENSMUST00000175072 87 ntBASIC2.01□□□□□ -2.09
Usp40Q8BWR4 Gm24366-201ENSMUST00000175383 86 ntBASIC2.01□□□□□ -2.09
Usp40Q8BWR4 Gm25068-201ENSMUST00000103895 110 ntBASIC2□□□□□ -2.09
Usp40Q8BWR4 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Usp40Q8BWR4 Mir1949-201ENSMUST00000157434 141 ntBASIC2□□□□□ -2.09
Usp40Q8BWR4 Gm23208-201ENSMUST00000158666 127 ntBASIC2□□□□□ -2.09
Usp40Q8BWR4 Gm26712-201ENSMUST00000180813 217 ntBASIC2□□□□□ -2.09
Usp40Q8BWR4 Mir6390-201ENSMUST00000184405 129 ntBASIC2□□□□□ -2.09
Usp40Q8BWR4 AC125488.1-201ENSMUST00000219586 212 ntBASIC2□□□□□ -2.09
Usp40Q8BWR4 Gm24523-201ENSMUST00000083965 132 ntBASIC2□□□□□ -2.09
Usp40Q8BWR4 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.99□□□□□ -2.09
Usp40Q8BWR4 Gm15692-201ENSMUST00000152173 352 ntBASIC1.99□□□□□ -2.09
Usp40Q8BWR4 Gm26358-201ENSMUST00000158215 97 ntBASIC1.99□□□□□ -2.09
Usp40Q8BWR4 Mir3064-201ENSMUST00000175532 67 ntBASIC1.99□□□□□ -2.09
Usp40Q8BWR4 Gm43927-201ENSMUST00000204599 117 ntBASIC1.99□□□□□ -2.09
Usp40Q8BWR4 Mir107-201ENSMUST00000083660 87 ntBASIC1.99□□□□□ -2.09
Usp40Q8BWR4 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Usp40Q8BWR4 Gm24701-201ENSMUST00000101946 105 ntBASIC1.98□□□□□ -2.09
Usp40Q8BWR4 Gm25992-201ENSMUST00000102437 109 ntBASIC1.98□□□□□ -2.09
Usp40Q8BWR4 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.98□□□□□ -2.09
Usp40Q8BWR4 Snord87-201ENSMUST00000175437 87 ntBASIC1.98□□□□□ -2.09
Usp40Q8BWR4 Gm27722-201ENSMUST00000183908 76 ntBASIC1.98□□□□□ -2.09
Usp40Q8BWR4 Mir6419-201ENSMUST00000184784 113 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 135.6 ms