Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm22966-201ENSMUST00000157957 129 ntBASIC-0.66□□□□□ -2.52
Ccdc40Q8BI79 mt-Tc-201ENSMUST00000082400 66 ntBASIC-0.66□□□□□ -2.52
Ccdc40Q8BI79 Gm22148-201ENSMUST00000104445 107 ntBASIC-0.67□□□□□ -2.52
Ccdc40Q8BI79 Gm24868-201ENSMUST00000157265 136 ntBASIC-0.67□□□□□ -2.52
Ccdc40Q8BI79 Gm24077-201ENSMUST00000158183 136 ntBASIC-0.67□□□□□ -2.52
Ccdc40Q8BI79 Gm24823-201ENSMUST00000175092 91 ntBASIC-0.67□□□□□ -2.52
Ccdc40Q8BI79 Gm42623-201ENSMUST00000197225 379 ntBASIC-0.67□□□□□ -2.52
Ccdc40Q8BI79 Gm23320-201ENSMUST00000104462 127 ntBASIC-0.68□□□□□ -2.52
Ccdc40Q8BI79 n-R5s39-201ENSMUST00000122613 108 ntBASIC-0.68□□□□□ -2.52
Ccdc40Q8BI79 Gm25056-201ENSMUST00000157372 62 ntBASIC-0.68□□□□□ -2.52
Ccdc40Q8BI79 Gm22788-201ENSMUST00000157876 61 ntBASIC-0.68□□□□□ -2.52
Ccdc40Q8BI79 Gm25654-201ENSMUST00000158467 88 ntBASIC-0.68□□□□□ -2.52
Ccdc40Q8BI79 Gm23690-201ENSMUST00000083036 94 ntBASIC-0.68□□□□□ -2.52
Ccdc40Q8BI79 Mir363-201ENSMUST00000093598 75 ntBASIC-0.68□□□□□ -2.52
Ccdc40Q8BI79 Gm26421-201ENSMUST00000104279 132 ntBASIC-0.69□□□□□ -2.52
Ccdc40Q8BI79 Gm22476-201ENSMUST00000158902 100 ntBASIC-0.69□□□□□ -2.52
Ccdc40Q8BI79 Snora15-201ENSMUST00000177461 131 ntBASIC-0.69□□□□□ -2.52
Ccdc40Q8BI79 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC-0.69□□□□□ -2.52
Ccdc40Q8BI79 AC125190.3-201ENSMUST00000223224 121 ntBASIC-0.69□□□□□ -2.52
Ccdc40Q8BI79 Gm11936-201ENSMUST00000118323 160 ntBASIC-0.7□□□□□ -2.52
Ccdc40Q8BI79 Gm23661-201ENSMUST00000122630 87 ntBASIC-0.7□□□□□ -2.52
Ccdc40Q8BI79 Gm24073-201ENSMUST00000158177 106 ntBASIC-0.7□□□□□ -2.52
Ccdc40Q8BI79 Mir3094-201ENSMUST00000175121 64 ntBASIC-0.7□□□□□ -2.52
Ccdc40Q8BI79 Gm23141-201ENSMUST00000178682 94 ntBASIC-0.7□□□□□ -2.52
Ccdc40Q8BI79 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC-0.71□□□□□ -2.52
Ccdc40Q8BI79 Gm25749-201ENSMUST00000175485 111 ntBASIC-0.71□□□□□ -2.52
Ccdc40Q8BI79 Gm25397-201ENSMUST00000176951 92 ntBASIC-0.71□□□□□ -2.52
Ccdc40Q8BI79 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC-0.71□□□□□ -2.52
Ccdc40Q8BI79 Mir1a-2-201ENSMUST00000198520 72 ntBASIC-0.71□□□□□ -2.52
Ccdc40Q8BI79 AL606472.1-201ENSMUST00000224628 275 ntBASIC-0.71□□□□□ -2.52
Ccdc40Q8BI79 Mir216b-201ENSMUST00000102363 86 ntBASIC-0.72□□□□□ -2.52
Ccdc40Q8BI79 Gm24009-201ENSMUST00000157734 93 ntBASIC-0.72□□□□□ -2.52
Ccdc40Q8BI79 Gm25772-201ENSMUST00000158574 56 ntBASIC-0.72□□□□□ -2.52
Ccdc40Q8BI79 Gm25596-201ENSMUST00000178368 107 ntBASIC-0.72□□□□□ -2.52
Ccdc40Q8BI79 Gm37750-201ENSMUST00000193563 129 ntBASIC-0.72□□□□□ -2.52
Ccdc40Q8BI79 Gm24232-201ENSMUST00000104314 132 ntBASIC-0.73□□□□□ -2.53
Ccdc40Q8BI79 Gm25328-201ENSMUST00000175013 107 ntBASIC-0.73□□□□□ -2.53
Ccdc40Q8BI79 Mir344-2-201ENSMUST00000175446 80 ntBASIC-0.73□□□□□ -2.53
Ccdc40Q8BI79 mt-Ta-201ENSMUST00000082398 69 ntBASIC-0.73□□□□□ -2.53
Ccdc40Q8BI79 Gm23442-201ENSMUST00000082919 134 ntBASIC-0.73□□□□□ -2.53
Ccdc40Q8BI79 Mir7038-201ENSMUST00000184833 71 ntBASIC-0.74□□□□□ -2.53
Ccdc40Q8BI79 Gm18665-201ENSMUST00000189783 270 ntBASIC-0.74□□□□□ -2.53
Ccdc40Q8BI79 AC154245.1-201ENSMUST00000224615 601 ntBASIC-0.75□□□□□ -2.53
Ccdc40Q8BI79 mt-Tl1-201ENSMUST00000082391 75 ntBASIC-0.75□□□□□ -2.53
Ccdc40Q8BI79 Snord49b-201ENSMUST00000082503 72 ntBASIC-0.75□□□□□ -2.53
Ccdc40Q8BI79 Mir302d-201ENSMUST00000083513 66 ntBASIC-0.75□□□□□ -2.53
Ccdc40Q8BI79 Mir466f-2-201ENSMUST00000104805 94 ntBASIC-0.76□□□□□ -2.53
Ccdc40Q8BI79 Gm24132-201ENSMUST00000104745 91 ntBASIC-0.77□□□□□ -2.53
Ccdc40Q8BI79 Gm11694-201ENSMUST00000118637 159 ntBASIC-0.78□□□□□ -2.53
Ccdc40Q8BI79 Gm25184-201ENSMUST00000157753 163 ntBASIC-0.78□□□□□ -2.53
Ccdc40Q8BI79 Gm24843-201ENSMUST00000158682 76 ntBASIC-0.78□□□□□ -2.53
Ccdc40Q8BI79 AC124687.1-201ENSMUST00000221868 189 ntBASIC-0.78□□□□□ -2.53
Ccdc40Q8BI79 Gm26207-201ENSMUST00000082909 104 ntBASIC-0.78□□□□□ -2.53
Ccdc40Q8BI79 Gm25366-201ENSMUST00000158845 124 ntBASIC-0.79□□□□□ -2.54
Ccdc40Q8BI79 Mir669a-7-201ENSMUST00000180364 87 ntBASIC-0.79□□□□□ -2.54
Ccdc40Q8BI79 Mir669a-6-201ENSMUST00000196127 87 ntBASIC-0.79□□□□□ -2.54
Ccdc40Q8BI79 Mir669a-12-201ENSMUST00000197274 87 ntBASIC-0.79□□□□□ -2.54
Ccdc40Q8BI79 Mir669a-5-201ENSMUST00000197439 87 ntBASIC-0.79□□□□□ -2.54
Ccdc40Q8BI79 Mir669a-10-201ENSMUST00000197745 87 ntBASIC-0.79□□□□□ -2.54
Ccdc40Q8BI79 Mir669a-11-201ENSMUST00000197952 87 ntBASIC-0.79□□□□□ -2.54
Ccdc40Q8BI79 Mir669a-4-201ENSMUST00000198665 87 ntBASIC-0.79□□□□□ -2.54
Ccdc40Q8BI79 Mir669a-9-201ENSMUST00000200087 87 ntBASIC-0.79□□□□□ -2.54
Ccdc40Q8BI79 Mir669a-8-201ENSMUST00000200268 87 ntBASIC-0.79□□□□□ -2.54
Ccdc40Q8BI79 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC-0.79□□□□□ -2.54
Ccdc40Q8BI79 Gm23654-201ENSMUST00000116758 126 ntBASIC-0.8□□□□□ -2.54
Ccdc40Q8BI79 Gm27792-201ENSMUST00000184031 115 ntBASIC-0.8□□□□□ -2.54
Ccdc40Q8BI79 Gm25797-201ENSMUST00000082640 107 ntBASIC-0.8□□□□□ -2.54
Ccdc40Q8BI79 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC-0.81□□□□□ -2.54
Ccdc40Q8BI79 Gm24468-201ENSMUST00000104489 104 ntBASIC-0.81□□□□□ -2.54
Ccdc40Q8BI79 Gm25834-201ENSMUST00000158916 101 ntBASIC-0.81□□□□□ -2.54
Ccdc40Q8BI79 Gm27905-201ENSMUST00000184005 207 ntBASIC-0.81□□□□□ -2.54
Ccdc40Q8BI79 Mir488-201ENSMUST00000093595 109 ntBASIC-0.81□□□□□ -2.54
Ccdc40Q8BI79 Gm25985-201ENSMUST00000122677 107 ntBASIC-0.82□□□□□ -2.54
Ccdc40Q8BI79 Gm25160-201ENSMUST00000158914 102 ntBASIC-0.82□□□□□ -2.54
Ccdc40Q8BI79 Gm27884-201ENSMUST00000183865 76 ntBASIC-0.82□□□□□ -2.54
Ccdc40Q8BI79 Gm27735-201ENSMUST00000185085 76 ntBASIC-0.82□□□□□ -2.54
Ccdc40Q8BI79 Mir7651-201ENSMUST00000184154 64 ntBASIC-0.83□□□□□ -2.54
Ccdc40Q8BI79 Mirlet7d-201ENSMUST00000083519 103 ntBASIC-0.83□□□□□ -2.54
Ccdc40Q8BI79 Mir183-201ENSMUST00000083685 70 ntBASIC-0.83□□□□□ -2.54
Ccdc40Q8BI79 Gm26081-201ENSMUST00000104068 132 ntBASIC-0.84□□□□□ -2.54
Ccdc40Q8BI79 Gm45688-201ENSMUST00000210002 101 ntBASIC-0.84□□□□□ -2.54
Ccdc40Q8BI79 Mir103-1-201ENSMUST00000083619 86 ntBASIC-0.84□□□□□ -2.54
Ccdc40Q8BI79 Gm23012-201ENSMUST00000104149 83 ntBASIC-0.85□□□□□ -2.55
Ccdc40Q8BI79 Gm23483-201ENSMUST00000104179 108 ntBASIC-0.85□□□□□ -2.55
Ccdc40Q8BI79 Gm25390-201ENSMUST00000157341 103 ntBASIC-0.85□□□□□ -2.55
Ccdc40Q8BI79 Gm22337-201ENSMUST00000157721 132 ntBASIC-0.85□□□□□ -2.55
Ccdc40Q8BI79 Gm27803-201ENSMUST00000183763 119 ntBASIC-0.85□□□□□ -2.55
Ccdc40Q8BI79 Gm44489-201ENSMUST00000104619 97 ntBASIC-0.86□□□□□ -2.55
Ccdc40Q8BI79 Gm26007-201ENSMUST00000158798 120 ntBASIC-0.86□□□□□ -2.55
Ccdc40Q8BI79 Snord61-201ENSMUST00000083176 71 ntBASIC-0.86□□□□□ -2.55
Ccdc40Q8BI79 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC-0.87□□□□□ -2.55
Ccdc40Q8BI79 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC-0.88□□□□□ -2.55
Ccdc40Q8BI79 Gm25388-201ENSMUST00000157339 151 ntBASIC-0.88□□□□□ -2.55
Ccdc40Q8BI79 Gm27579-201ENSMUST00000158113 63 ntBASIC-0.89□□□□□ -2.55
Ccdc40Q8BI79 Snora16a-201ENSMUST00000083163 136 ntBASIC-0.89□□□□□ -2.55
Ccdc40Q8BI79 Gm25249-201ENSMUST00000175471 78 ntBASIC-0.9□□□□□ -2.55
Ccdc40Q8BI79 Gm14001-201ENSMUST00000118847 247 ntBASIC-0.91□□□□□ -2.56
Ccdc40Q8BI79 Gm14838-201ENSMUST00000118913 248 ntBASIC-0.91□□□□□ -2.56
Ccdc40Q8BI79 Mir344h-1-201ENSMUST00000174922 60 ntBASIC-0.91□□□□□ -2.56
Ccdc40Q8BI79 Mir344h-2-201ENSMUST00000175612 60 ntBASIC-0.91□□□□□ -2.56
Retrieved 100 of 76,532 protein–RNA pairs in 137.1 ms