Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Snord64-201ENSMUST00000104003 67 ntBASIC0.87□□□□□ -2.27
Ubfd1Q78JW9 Gm12013-201ENSMUST00000121971 155 ntBASIC0.87□□□□□ -2.27
Ubfd1Q78JW9 Gm22469-201ENSMUST00000104118 133 ntBASIC0.86□□□□□ -2.27
Ubfd1Q78JW9 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.86□□□□□ -2.27
Ubfd1Q78JW9 Gm37330-201ENSMUST00000192606 153 ntBASIC0.86□□□□□ -2.27
Ubfd1Q78JW9 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.86□□□□□ -2.27
Ubfd1Q78JW9 Gm38274-201ENSMUST00000195689 148 ntBASIC0.86□□□□□ -2.27
Ubfd1Q78JW9 Gm44211-201ENSMUST00000204867 145 ntBASIC0.86□□□□□ -2.27
Ubfd1Q78JW9 Gm23301-201ENSMUST00000082713 65 ntBASIC0.86□□□□□ -2.27
Ubfd1Q78JW9 Gm26338-201ENSMUST00000102372 110 ntBASIC0.85□□□□□ -2.27
Ubfd1Q78JW9 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC0.85□□□□□ -2.27
Ubfd1Q78JW9 Gm26290-201ENSMUST00000158891 145 ntBASIC0.85□□□□□ -2.27
Ubfd1Q78JW9 Gm26158-201ENSMUST00000158973 119 ntBASIC0.85□□□□□ -2.27
Ubfd1Q78JW9 Mir21c-201ENSMUST00000184910 78 ntBASIC0.85□□□□□ -2.27
Ubfd1Q78JW9 Gm27587-201ENSMUST00000185116 163 ntBASIC0.85□□□□□ -2.27
Ubfd1Q78JW9 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.84□□□□□ -2.27
Ubfd1Q78JW9 n-R5s39-201ENSMUST00000122613 108 ntBASIC0.84□□□□□ -2.27
Ubfd1Q78JW9 Gm23857-201ENSMUST00000158379 111 ntBASIC0.84□□□□□ -2.27
Ubfd1Q78JW9 Gm24500-201ENSMUST00000158447 124 ntBASIC0.84□□□□□ -2.27
Ubfd1Q78JW9 Gm24678-201ENSMUST00000158756 104 ntBASIC0.84□□□□□ -2.27
Ubfd1Q78JW9 Gm24167-201ENSMUST00000177733 124 ntBASIC0.84□□□□□ -2.27
Ubfd1Q78JW9 Gm24028-201ENSMUST00000178991 124 ntBASIC0.84□□□□□ -2.27
Ubfd1Q78JW9 Gm28435-201ENSMUST00000185496 108 ntBASIC0.84□□□□□ -2.27
Ubfd1Q78JW9 Gm26454-201ENSMUST00000082682 107 ntBASIC0.84□□□□□ -2.27
Ubfd1Q78JW9 Gm22196-201ENSMUST00000116865 109 ntBASIC0.83□□□□□ -2.28
Ubfd1Q78JW9 Gm22558-201ENSMUST00000157326 95 ntBASIC0.83□□□□□ -2.28
Ubfd1Q78JW9 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.83□□□□□ -2.28
Ubfd1Q78JW9 Gm23917-201ENSMUST00000175256 98 ntBASIC0.83□□□□□ -2.28
Ubfd1Q78JW9 Gm25006-201ENSMUST00000083813 107 ntBASIC0.83□□□□□ -2.28
Ubfd1Q78JW9 Gm25787-201ENSMUST00000104709 92 ntBASIC0.82□□□□□ -2.28
Ubfd1Q78JW9 Gm23653-201ENSMUST00000116751 97 ntBASIC0.82□□□□□ -2.28
Ubfd1Q78JW9 Gm25680-201ENSMUST00000116917 126 ntBASIC0.82□□□□□ -2.28
Ubfd1Q78JW9 Gm22635-201ENSMUST00000116962 126 ntBASIC0.82□□□□□ -2.28
Ubfd1Q78JW9 Gm23989-201ENSMUST00000117030 66 ntBASIC0.82□□□□□ -2.28
Ubfd1Q78JW9 Gm26498-201ENSMUST00000177799 79 ntBASIC0.82□□□□□ -2.28
Ubfd1Q78JW9 Gm23966-201ENSMUST00000179823 107 ntBASIC0.82□□□□□ -2.28
Ubfd1Q78JW9 Gm26230-201ENSMUST00000180141 79 ntBASIC0.82□□□□□ -2.28
Ubfd1Q78JW9 AC124687.1-201ENSMUST00000221868 189 ntBASIC0.82□□□□□ -2.28
Ubfd1Q78JW9 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
Ubfd1Q78JW9 Gm24649-201ENSMUST00000157106 134 ntBASIC0.81□□□□□ -2.28
Ubfd1Q78JW9 Mir100-201ENSMUST00000175270 80 ntBASIC0.81□□□□□ -2.28
Ubfd1Q78JW9 Mir6364-201ENSMUST00000183396 86 ntBASIC0.81□□□□□ -2.28
Ubfd1Q78JW9 Gm44301-201ENSMUST00000200362 143 ntBASIC0.81□□□□□ -2.28
Ubfd1Q78JW9 Mir362-201ENSMUST00000093592 65 ntBASIC0.81□□□□□ -2.28
Ubfd1Q78JW9 Gm22544-201ENSMUST00000104349 127 ntBASIC0.8□□□□□ -2.28
Ubfd1Q78JW9 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.8□□□□□ -2.28
Ubfd1Q78JW9 Gm23044-201ENSMUST00000157891 100 ntBASIC0.8□□□□□ -2.28
Ubfd1Q78JW9 Gm25693-201ENSMUST00000175443 85 ntBASIC0.8□□□□□ -2.28
Ubfd1Q78JW9 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.8□□□□□ -2.28
Ubfd1Q78JW9 Gm25920-201ENSMUST00000158307 99 ntBASIC0.79□□□□□ -2.28
Ubfd1Q78JW9 Gm22638-201ENSMUST00000179674 107 ntBASIC0.79□□□□□ -2.28
Ubfd1Q78JW9 Snord33-201ENSMUST00000083694 84 ntBASIC0.79□□□□□ -2.28
Ubfd1Q78JW9 Mir7079-201ENSMUST00000184697 69 ntBASIC0.78□□□□□ -2.28
Ubfd1Q78JW9 Gm24920-201ENSMUST00000083018 85 ntBASIC0.78□□□□□ -2.28
Ubfd1Q78JW9 Gm25629-201ENSMUST00000084001 107 ntBASIC0.78□□□□□ -2.28
Ubfd1Q78JW9 Gm22689-201ENSMUST00000102452 110 ntBASIC0.77□□□□□ -2.29
Ubfd1Q78JW9 Mir802-201ENSMUST00000103258 97 ntBASIC0.77□□□□□ -2.29
Ubfd1Q78JW9 Gm25416-201ENSMUST00000104221 107 ntBASIC0.77□□□□□ -2.29
Ubfd1Q78JW9 Gm6985-201ENSMUST00000121255 271 ntBASIC0.77□□□□□ -2.29
Ubfd1Q78JW9 Gm25600-201ENSMUST00000158357 106 ntBASIC0.77□□□□□ -2.29
Ubfd1Q78JW9 Gm24129-201ENSMUST00000158537 97 ntBASIC0.77□□□□□ -2.29
Ubfd1Q78JW9 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.77□□□□□ -2.29
Ubfd1Q78JW9 n-R5s96-201ENSMUST00000082574 124 ntBASIC0.77□□□□□ -2.29
Ubfd1Q78JW9 Mir377-201ENSMUST00000083504 68 ntBASIC0.77□□□□□ -2.29
Ubfd1Q78JW9 Mir764-201ENSMUST00000103259 108 ntBASIC0.76□□□□□ -2.29
Ubfd1Q78JW9 Gm23203-201ENSMUST00000104374 107 ntBASIC0.76□□□□□ -2.29
Ubfd1Q78JW9 Gm22772-201ENSMUST00000104451 121 ntBASIC0.76□□□□□ -2.29
Ubfd1Q78JW9 Mir3109-201ENSMUST00000175301 88 ntBASIC0.76□□□□□ -2.29
Ubfd1Q78JW9 Gm25812-201ENSMUST00000082751 103 ntBASIC0.76□□□□□ -2.29
Ubfd1Q78JW9 Gm25378-201ENSMUST00000104333 129 ntBASIC0.75□□□□□ -2.29
Ubfd1Q78JW9 Gm22030-201ENSMUST00000116942 63 ntBASIC0.75□□□□□ -2.29
Ubfd1Q78JW9 Gm23986-201ENSMUST00000157144 63 ntBASIC0.75□□□□□ -2.29
Ubfd1Q78JW9 Gm24290-201ENSMUST00000157634 96 ntBASIC0.75□□□□□ -2.29
Ubfd1Q78JW9 Gm22541-201ENSMUST00000158165 127 ntBASIC0.75□□□□□ -2.29
Ubfd1Q78JW9 Gm23008-201ENSMUST00000158946 80 ntBASIC0.75□□□□□ -2.29
Ubfd1Q78JW9 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
Ubfd1Q78JW9 Gm23735-201ENSMUST00000082551 134 ntBASIC0.75□□□□□ -2.29
Ubfd1Q78JW9 Gm23138-201ENSMUST00000083365 103 ntBASIC0.75□□□□□ -2.29
Ubfd1Q78JW9 Gm24579-201ENSMUST00000103964 144 ntBASIC0.74□□□□□ -2.29
Ubfd1Q78JW9 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC0.74□□□□□ -2.29
Ubfd1Q78JW9 Gm23434-201ENSMUST00000157179 100 ntBASIC0.74□□□□□ -2.29
Ubfd1Q78JW9 Mir7010-201ENSMUST00000183464 63 ntBASIC0.74□□□□□ -2.29
Ubfd1Q78JW9 Gm45429-201ENSMUST00000209527 172 ntBASIC0.74□□□□□ -2.29
Ubfd1Q78JW9 Gm23654-201ENSMUST00000116758 126 ntBASIC0.73□□□□□ -2.29
Ubfd1Q78JW9 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
Ubfd1Q78JW9 Gm23783-201ENSMUST00000157941 102 ntBASIC0.73□□□□□ -2.29
Ubfd1Q78JW9 Gm23351-201ENSMUST00000158427 125 ntBASIC0.73□□□□□ -2.29
Ubfd1Q78JW9 Gm20386-201ENSMUST00000174010 132 ntBASIC0.73□□□□□ -2.29
Ubfd1Q78JW9 Gm23126-201ENSMUST00000104260 134 ntBASIC0.72□□□□□ -2.29
Ubfd1Q78JW9 Gm12086-201ENSMUST00000120863 228 ntBASIC0.72□□□□□ -2.29
Ubfd1Q78JW9 Gm24288-201ENSMUST00000157630 144 ntBASIC0.72□□□□□ -2.29
Ubfd1Q78JW9 Gm25161-201ENSMUST00000158913 132 ntBASIC0.72□□□□□ -2.29
Ubfd1Q78JW9 Gm27289-201ENSMUST00000183341 82 ntBASIC0.72□□□□□ -2.29
Ubfd1Q78JW9 Mir6342-201ENSMUST00000183870 125 ntBASIC0.72□□□□□ -2.29
Ubfd1Q78JW9 Gm44602-201ENSMUST00000205948 132 ntBASIC0.72□□□□□ -2.29
Ubfd1Q78JW9 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.72□□□□□ -2.29
Ubfd1Q78JW9 Gm23507-201ENSMUST00000083078 107 ntBASIC0.72□□□□□ -2.29
Ubfd1Q78JW9 Gm11694-201ENSMUST00000118637 159 ntBASIC0.71□□□□□ -2.3
Ubfd1Q78JW9 Gm23601-201ENSMUST00000157259 131 ntBASIC0.71□□□□□ -2.3
Ubfd1Q78JW9 Gm24916-201ENSMUST00000157287 79 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 76,532 protein–RNA pairs in 143.1 ms