Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 Gm24246-201ENSMUST00000157315 132 ntBASIC0.51□□□□□ -2.33
Smarca1Q6PGB8 Gm25393-201ENSMUST00000157336 285 ntBASIC0.51□□□□□ -2.33
Smarca1Q6PGB8 Gm26290-201ENSMUST00000158891 145 ntBASIC0.51□□□□□ -2.33
Smarca1Q6PGB8 Gm25693-201ENSMUST00000175443 85 ntBASIC0.51□□□□□ -2.33
Smarca1Q6PGB8 AC168880.2-201ENSMUST00000224488 201 ntBASIC0.51□□□□□ -2.33
Smarca1Q6PGB8 Gm22030-201ENSMUST00000116942 63 ntBASIC0.5□□□□□ -2.33
Smarca1Q6PGB8 Gm25060-201ENSMUST00000157374 130 ntBASIC0.5□□□□□ -2.33
Smarca1Q6PGB8 Gm24718-201ENSMUST00000157521 136 ntBASIC0.5□□□□□ -2.33
Smarca1Q6PGB8 Gm22520-201ENSMUST00000158269 129 ntBASIC0.5□□□□□ -2.33
Smarca1Q6PGB8 Gm24129-201ENSMUST00000158537 97 ntBASIC0.5□□□□□ -2.33
Smarca1Q6PGB8 Gm27980-201ENSMUST00000184094 169 ntBASIC0.5□□□□□ -2.33
Smarca1Q6PGB8 Mir669b-201ENSMUST00000102172 97 ntBASIC0.49□□□□□ -2.33
Smarca1Q6PGB8 Gm26091-201ENSMUST00000122704 82 ntBASIC0.49□□□□□ -2.33
Smarca1Q6PGB8 Gm23672-201ENSMUST00000157471 107 ntBASIC0.49□□□□□ -2.33
Smarca1Q6PGB8 Gm24290-201ENSMUST00000157634 96 ntBASIC0.49□□□□□ -2.33
Smarca1Q6PGB8 Gm25375-201ENSMUST00000158157 135 ntBASIC0.49□□□□□ -2.33
Smarca1Q6PGB8 Mir6342-201ENSMUST00000183870 125 ntBASIC0.49□□□□□ -2.33
Smarca1Q6PGB8 Gm43749-201ENSMUST00000199345 352 ntBASIC0.49□□□□□ -2.33
Smarca1Q6PGB8 Gm26421-201ENSMUST00000104279 132 ntBASIC0.48□□□□□ -2.33
Smarca1Q6PGB8 Gm26084-201ENSMUST00000157903 104 ntBASIC0.48□□□□□ -2.33
Smarca1Q6PGB8 Gm27607-201ENSMUST00000185162 122 ntBASIC0.48□□□□□ -2.33
Smarca1Q6PGB8 Mir5124a-201ENSMUST00000175528 72 ntBASIC0.47□□□□□ -2.33
Smarca1Q6PGB8 Mir6481-201ENSMUST00000184617 110 ntBASIC0.47□□□□□ -2.33
Smarca1Q6PGB8 Gm27943-201ENSMUST00000184844 116 ntBASIC0.47□□□□□ -2.33
Smarca1Q6PGB8 Mir1949-202ENSMUST00000199259 70 ntBASIC0.47□□□□□ -2.33
Smarca1Q6PGB8 Gm45541-201ENSMUST00000210443 54 ntBASIC0.47□□□□□ -2.33
Smarca1Q6PGB8 Gm25600-201ENSMUST00000158357 106 ntBASIC0.46□□□□□ -2.34
Smarca1Q6PGB8 Mir669j-201ENSMUST00000179023 121 ntBASIC0.46□□□□□ -2.34
Smarca1Q6PGB8 Gm29535-201ENSMUST00000185723 109 ntBASIC0.46□□□□□ -2.34
Smarca1Q6PGB8 Gm28143-201ENSMUST00000191082 109 ntBASIC0.46□□□□□ -2.34
Smarca1Q6PGB8 Gm44828-201ENSMUST00000203745 106 ntBASIC0.46□□□□□ -2.34
Smarca1Q6PGB8 AC151902.2-201ENSMUST00000226419 301 ntBASIC0.46□□□□□ -2.34
Smarca1Q6PGB8 Gm24208-201ENSMUST00000082783 135 ntBASIC0.46□□□□□ -2.34
Smarca1Q6PGB8 Gm22759-201ENSMUST00000102276 96 ntBASIC0.45□□□□□ -2.34
Smarca1Q6PGB8 Gm23180-201ENSMUST00000158686 125 ntBASIC0.45□□□□□ -2.34
Smarca1Q6PGB8 Mir6896-201ENSMUST00000198033 73 ntBASIC0.45□□□□□ -2.34
Smarca1Q6PGB8 Gm24141-201ENSMUST00000122776 115 ntBASIC0.44□□□□□ -2.34
Smarca1Q6PGB8 Gm22451-201ENSMUST00000122803 151 ntBASIC0.44□□□□□ -2.34
Smarca1Q6PGB8 Traj61-201ENSMUST00000165025 72 ntBASIC0.44□□□□□ -2.34
Smarca1Q6PGB8 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.44□□□□□ -2.34
Smarca1Q6PGB8 Gm25629-201ENSMUST00000084001 107 ntBASIC0.44□□□□□ -2.34
Smarca1Q6PGB8 Gm22983-201ENSMUST00000158308 104 ntBASIC0.43□□□□□ -2.34
Smarca1Q6PGB8 Mir7077-201ENSMUST00000183991 57 ntBASIC0.43□□□□□ -2.34
Smarca1Q6PGB8 Mir376b-201ENSMUST00000195930 82 ntBASIC0.43□□□□□ -2.34
Smarca1Q6PGB8 Mir7229-201ENSMUST00000197062 53 ntBASIC0.43□□□□□ -2.34
Smarca1Q6PGB8 Gm44455-201ENSMUST00000200061 82 ntBASIC0.43□□□□□ -2.34
Smarca1Q6PGB8 Gm25894-201ENSMUST00000083458 75 ntBASIC0.43□□□□□ -2.34
Smarca1Q6PGB8 Mir224-201ENSMUST00000083608 82 ntBASIC0.43□□□□□ -2.34
Smarca1Q6PGB8 Gm24263-201ENSMUST00000104059 107 ntBASIC0.42□□□□□ -2.34
Smarca1Q6PGB8 Gm26303-201ENSMUST00000116845 119 ntBASIC0.42□□□□□ -2.34
Smarca1Q6PGB8 Gm13065-201ENSMUST00000119178 141 ntBASIC0.42□□□□□ -2.34
Smarca1Q6PGB8 Gm23988-201ENSMUST00000117034 122 ntBASIC0.41□□□□□ -2.34
Smarca1Q6PGB8 Gm23994-201ENSMUST00000158059 88 ntBASIC0.41□□□□□ -2.34
Smarca1Q6PGB8 Gm22239-201ENSMUST00000175220 103 ntBASIC0.41□□□□□ -2.34
Smarca1Q6PGB8 Gm24321-201ENSMUST00000175348 80 ntBASIC0.41□□□□□ -2.34
Smarca1Q6PGB8 Gm44457-201ENSMUST00000198109 76 ntBASIC0.41□□□□□ -2.34
Smarca1Q6PGB8 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
Smarca1Q6PGB8 Gm26202-201ENSMUST00000082910 65 ntBASIC0.41□□□□□ -2.34
Smarca1Q6PGB8 Gm23969-201ENSMUST00000083324 74 ntBASIC0.41□□□□□ -2.34
Smarca1Q6PGB8 Mirlet7g-201ENSMUST00000083506 88 ntBASIC0.41□□□□□ -2.34
Smarca1Q6PGB8 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC0.41□□□□□ -2.34
Smarca1Q6PGB8 Gm14400-201ENSMUST00000117234 2135 ntBASIC0.4□□□□□ -2.35
Smarca1Q6PGB8 Mir669f-201ENSMUST00000103850 121 ntBASIC0.4□□□□□ -2.35
Smarca1Q6PGB8 Gm23260-201ENSMUST00000158317 172 ntBASIC0.4□□□□□ -2.35
Smarca1Q6PGB8 Gm25367-201ENSMUST00000158846 106 ntBASIC0.4□□□□□ -2.35
Smarca1Q6PGB8 Gm45265-201ENSMUST00000210852 2497 ntBASIC0.4□□□□□ -2.35
Smarca1Q6PGB8 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC0.39□□□□□ -2.35
Smarca1Q6PGB8 Gm22088-201ENSMUST00000158341 117 ntBASIC0.39□□□□□ -2.35
Smarca1Q6PGB8 Gm27699-201ENSMUST00000183553 180 ntBASIC0.39□□□□□ -2.35
Smarca1Q6PGB8 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.39□□□□□ -2.35
Smarca1Q6PGB8 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.39□□□□□ -2.35
Smarca1Q6PGB8 Gm25040-201ENSMUST00000103877 66 ntBASIC0.38□□□□□ -2.35
Smarca1Q6PGB8 Gm24278-201ENSMUST00000104239 127 ntBASIC0.38□□□□□ -2.35
Smarca1Q6PGB8 Gm26018-201ENSMUST00000104406 128 ntBASIC0.38□□□□□ -2.35
Smarca1Q6PGB8 Gm22706-201ENSMUST00000157907 112 ntBASIC0.38□□□□□ -2.35
Smarca1Q6PGB8 Gm26116-201ENSMUST00000175600 77 ntBASIC0.38□□□□□ -2.35
Smarca1Q6PGB8 Gm23722-201ENSMUST00000083002 130 ntBASIC0.38□□□□□ -2.35
Smarca1Q6PGB8 Gm25497-201ENSMUST00000104425 132 ntBASIC0.37□□□□□ -2.35
Smarca1Q6PGB8 Gm25974-201ENSMUST00000158701 94 ntBASIC0.37□□□□□ -2.35
Smarca1Q6PGB8 Mir21c-201ENSMUST00000184910 78 ntBASIC0.37□□□□□ -2.35
Smarca1Q6PGB8 Gm23531-201ENSMUST00000104567 68 ntBASIC0.36□□□□□ -2.35
Smarca1Q6PGB8 Gm24467-201ENSMUST00000157887 126 ntBASIC0.36□□□□□ -2.35
Smarca1Q6PGB8 Gm27475-201ENSMUST00000183420 61 ntBASIC0.36□□□□□ -2.35
Smarca1Q6PGB8 Mir7065-201ENSMUST00000185110 61 ntBASIC0.36□□□□□ -2.35
Smarca1Q6PGB8 Gm45492-201ENSMUST00000211611 288 ntBASIC0.36□□□□□ -2.35
Smarca1Q6PGB8 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.36□□□□□ -2.35
Smarca1Q6PGB8 Gm25081-201ENSMUST00000082534 108 ntBASIC0.36□□□□□ -2.35
Smarca1Q6PGB8 Snora75-201ENSMUST00000082903 133 ntBASIC0.36□□□□□ -2.35
Smarca1Q6PGB8 Gm25091-201ENSMUST00000103997 71 ntBASIC0.35□□□□□ -2.35
Smarca1Q6PGB8 Gm24233-201ENSMUST00000104317 122 ntBASIC0.35□□□□□ -2.35
Smarca1Q6PGB8 Gm12013-201ENSMUST00000121971 155 ntBASIC0.35□□□□□ -2.35
Smarca1Q6PGB8 Gm24717-201ENSMUST00000157522 124 ntBASIC0.35□□□□□ -2.35
Smarca1Q6PGB8 Gm23278-201ENSMUST00000157911 143 ntBASIC0.35□□□□□ -2.35
Smarca1Q6PGB8 Gm44602-201ENSMUST00000205948 132 ntBASIC0.35□□□□□ -2.35
Smarca1Q6PGB8 AC165138.1-201ENSMUST00000226984 270 ntBASIC0.35□□□□□ -2.35
Smarca1Q6PGB8 Mir670-201ENSMUST00000102380 100 ntBASIC0.34□□□□□ -2.36
Smarca1Q6PGB8 n-R5s39-201ENSMUST00000122613 108 ntBASIC0.34□□□□□ -2.36
Smarca1Q6PGB8 Gm22966-201ENSMUST00000157957 129 ntBASIC0.34□□□□□ -2.36
Smarca1Q6PGB8 Gm27297-201ENSMUST00000183395 105 ntBASIC0.34□□□□□ -2.36
Smarca1Q6PGB8 Gm27717-201ENSMUST00000183933 151 ntBASIC0.34□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 188 ms