Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Gm27898-201ENSMUST00000183987 80 ntBASIC1.23□□□□□ -2.21
Sp140Q6NSQ5 Gm28794-201ENSMUST00000185276 136 ntBASIC1.23□□□□□ -2.21
Sp140Q6NSQ5 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
Sp140Q6NSQ5 Gm24271-201ENSMUST00000102327 111 ntBASIC1.22□□□□□ -2.21
Sp140Q6NSQ5 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC1.22□□□□□ -2.21
Sp140Q6NSQ5 Gm25393-201ENSMUST00000157336 285 ntBASIC1.22□□□□□ -2.21
Sp140Q6NSQ5 Gm22706-201ENSMUST00000157907 112 ntBASIC1.22□□□□□ -2.21
Sp140Q6NSQ5 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
Sp140Q6NSQ5 Gm24099-201ENSMUST00000083384 107 ntBASIC1.22□□□□□ -2.21
Sp140Q6NSQ5 Gm25629-201ENSMUST00000084001 107 ntBASIC1.22□□□□□ -2.21
Sp140Q6NSQ5 Mir1a-1-201ENSMUST00000093635 77 ntBASIC1.22□□□□□ -2.21
Sp140Q6NSQ5 AC127302.3-201ENSMUST00000215480 2791 ntBASIC1.21□□□□□ -2.22
Sp140Q6NSQ5 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
Sp140Q6NSQ5 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
Sp140Q6NSQ5 Gm25110-201ENSMUST00000116684 121 ntBASIC1.21□□□□□ -2.22
Sp140Q6NSQ5 Gm25775-201ENSMUST00000116716 121 ntBASIC1.21□□□□□ -2.22
Sp140Q6NSQ5 Gm24795-201ENSMUST00000116737 121 ntBASIC1.21□□□□□ -2.22
Sp140Q6NSQ5 Gm23881-201ENSMUST00000116872 66 ntBASIC1.21□□□□□ -2.22
Sp140Q6NSQ5 Gm25171-201ENSMUST00000116926 121 ntBASIC1.21□□□□□ -2.22
Sp140Q6NSQ5 Gm25901-201ENSMUST00000158494 130 ntBASIC1.21□□□□□ -2.22
Sp140Q6NSQ5 Gm23130-201ENSMUST00000104252 74 ntBASIC1.2□□□□□ -2.22
Sp140Q6NSQ5 Gm26274-201ENSMUST00000157103 321 ntBASIC1.2□□□□□ -2.22
Sp140Q6NSQ5 Gm23065-201ENSMUST00000158236 130 ntBASIC1.2□□□□□ -2.22
Sp140Q6NSQ5 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.2□□□□□ -2.22
Sp140Q6NSQ5 AC140930.2-201ENSMUST00000221803 109 ntBASIC1.2□□□□□ -2.22
Sp140Q6NSQ5 Gm26109-201ENSMUST00000083970 70 ntBASIC1.2□□□□□ -2.22
Sp140Q6NSQ5 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
Sp140Q6NSQ5 Gm12469-201ENSMUST00000117623 207 ntBASIC1.19□□□□□ -2.22
Sp140Q6NSQ5 Gm16265-201ENSMUST00000134558 108 ntBASIC1.19□□□□□ -2.22
Sp140Q6NSQ5 Mir3083-201ENSMUST00000175377 64 ntBASIC1.19□□□□□ -2.22
Sp140Q6NSQ5 Gm25618-201ENSMUST00000179484 107 ntBASIC1.19□□□□□ -2.22
Sp140Q6NSQ5 Mir7014-201ENSMUST00000183853 63 ntBASIC1.19□□□□□ -2.22
Sp140Q6NSQ5 Mir6390-201ENSMUST00000184405 129 ntBASIC1.19□□□□□ -2.22
Sp140Q6NSQ5 Gm26062-201ENSMUST00000083379 107 ntBASIC1.19□□□□□ -2.22
Sp140Q6NSQ5 Gm24476-201ENSMUST00000157437 131 ntBASIC1.18□□□□□ -2.22
Sp140Q6NSQ5 Gm22074-201ENSMUST00000158595 113 ntBASIC1.18□□□□□ -2.22
Sp140Q6NSQ5 Gm22129-201ENSMUST00000179034 107 ntBASIC1.18□□□□□ -2.22
Sp140Q6NSQ5 Gm44469-201ENSMUST00000198558 79 ntBASIC1.18□□□□□ -2.22
Sp140Q6NSQ5 Gm22980-201ENSMUST00000082608 70 ntBASIC1.18□□□□□ -2.22
Sp140Q6NSQ5 Gm25851-201ENSMUST00000082794 107 ntBASIC1.18□□□□□ -2.22
Sp140Q6NSQ5 Gm25337-201ENSMUST00000083723 104 ntBASIC1.18□□□□□ -2.22
Sp140Q6NSQ5 Gm23344-201ENSMUST00000083818 68 ntBASIC1.18□□□□□ -2.22
Sp140Q6NSQ5 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
Sp140Q6NSQ5 Gm26253-201ENSMUST00000122493 103 ntBASIC1.17□□□□□ -2.22
Sp140Q6NSQ5 Gm26089-201ENSMUST00000157898 107 ntBASIC1.17□□□□□ -2.22
Sp140Q6NSQ5 Gm22429-201ENSMUST00000158553 130 ntBASIC1.17□□□□□ -2.22
Sp140Q6NSQ5 Mir1933-201ENSMUST00000158930 88 ntBASIC1.17□□□□□ -2.22
Sp140Q6NSQ5 Gm27645-201ENSMUST00000183348 77 ntBASIC1.17□□□□□ -2.22
Sp140Q6NSQ5 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
Sp140Q6NSQ5 Gm36956-201ENSMUST00000193830 214 ntBASIC1.17□□□□□ -2.22
Sp140Q6NSQ5 Gm14884-201ENSMUST00000120456 196 ntBASIC1.16□□□□□ -2.22
Sp140Q6NSQ5 Gm10548-202ENSMUST00000165672 272 ntBASIC1.16□□□□□ -2.22
Sp140Q6NSQ5 Mir3098-201ENSMUST00000175416 87 ntBASIC1.16□□□□□ -2.22
Sp140Q6NSQ5 Gm27993-201ENSMUST00000184362 85 ntBASIC1.16□□□□□ -2.22
Sp140Q6NSQ5 AC166341.8-201ENSMUST00000221267 108 ntBASIC1.16□□□□□ -2.22
Sp140Q6NSQ5 Gm25128-201ENSMUST00000083339 76 ntBASIC1.16□□□□□ -2.22
Sp140Q6NSQ5 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.16□□□□□ -2.22
Sp140Q6NSQ5 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
Sp140Q6NSQ5 Mir1904-201ENSMUST00000122702 80 ntBASIC1.15□□□□□ -2.23
Sp140Q6NSQ5 Gm43944-201ENSMUST00000205220 120 ntBASIC1.15□□□□□ -2.23
Sp140Q6NSQ5 mt-Tc-201ENSMUST00000082400 66 ntBASIC1.15□□□□□ -2.23
Sp140Q6NSQ5 Gm25899-201ENSMUST00000082672 141 ntBASIC1.15□□□□□ -2.23
Sp140Q6NSQ5 Gm22753-201ENSMUST00000083657 107 ntBASIC1.15□□□□□ -2.23
Sp140Q6NSQ5 Gm25289-201ENSMUST00000122799 119 ntBASIC1.14□□□□□ -2.23
Sp140Q6NSQ5 Gm22233-201ENSMUST00000157464 114 ntBASIC1.14□□□□□ -2.23
Sp140Q6NSQ5 Gm25868-201ENSMUST00000158253 114 ntBASIC1.14□□□□□ -2.23
Sp140Q6NSQ5 Gm26363-201ENSMUST00000158866 83 ntBASIC1.14□□□□□ -2.23
Sp140Q6NSQ5 Gm26466-201ENSMUST00000179615 79 ntBASIC1.14□□□□□ -2.23
Sp140Q6NSQ5 Mir7091-201ENSMUST00000184075 79 ntBASIC1.14□□□□□ -2.23
Sp140Q6NSQ5 Gm27419-201ENSMUST00000184576 109 ntBASIC1.14□□□□□ -2.23
Sp140Q6NSQ5 Mir3087-201ENSMUST00000199405 56 ntBASIC1.14□□□□□ -2.23
Sp140Q6NSQ5 AC132833.2-201ENSMUST00000228699 157 ntBASIC1.14□□□□□ -2.23
Sp140Q6NSQ5 Gm11694-201ENSMUST00000118637 159 ntBASIC1.13□□□□□ -2.23
Sp140Q6NSQ5 Gm26133-201ENSMUST00000157363 100 ntBASIC1.13□□□□□ -2.23
Sp140Q6NSQ5 Gm23900-201ENSMUST00000157569 108 ntBASIC1.13□□□□□ -2.23
Sp140Q6NSQ5 Gm22515-201ENSMUST00000158273 305 ntBASIC1.13□□□□□ -2.23
Sp140Q6NSQ5 Gm25014-201ENSMUST00000158401 103 ntBASIC1.13□□□□□ -2.23
Sp140Q6NSQ5 Gm24129-201ENSMUST00000158537 97 ntBASIC1.13□□□□□ -2.23
Sp140Q6NSQ5 Gm24801-201ENSMUST00000178503 105 ntBASIC1.13□□□□□ -2.23
Sp140Q6NSQ5 Gm24311-201ENSMUST00000082570 104 ntBASIC1.13□□□□□ -2.23
Sp140Q6NSQ5 Gm22251-201ENSMUST00000083216 107 ntBASIC1.13□□□□□ -2.23
Sp140Q6NSQ5 Gm24252-201ENSMUST00000083700 132 ntBASIC1.13□□□□□ -2.23
Sp140Q6NSQ5 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
Sp140Q6NSQ5 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
Sp140Q6NSQ5 n-R5s157-201ENSMUST00000122543 121 ntBASIC1.12□□□□□ -2.23
Sp140Q6NSQ5 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC1.12□□□□□ -2.23
Sp140Q6NSQ5 Mir6381-201ENSMUST00000183426 87 ntBASIC1.12□□□□□ -2.23
Sp140Q6NSQ5 Gm38323-201ENSMUST00000192450 210 ntBASIC1.12□□□□□ -2.23
Sp140Q6NSQ5 Gm44488-201ENSMUST00000199467 119 ntBASIC1.12□□□□□ -2.23
Sp140Q6NSQ5 Gm24527-201ENSMUST00000082920 107 ntBASIC1.12□□□□□ -2.23
Sp140Q6NSQ5 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.11□□□□□ -2.23
Sp140Q6NSQ5 Gm22770-201ENSMUST00000158368 67 ntBASIC1.11□□□□□ -2.23
Sp140Q6NSQ5 Gm23857-201ENSMUST00000158379 111 ntBASIC1.11□□□□□ -2.23
Sp140Q6NSQ5 Gm26029-201ENSMUST00000158659 132 ntBASIC1.11□□□□□ -2.23
Sp140Q6NSQ5 Gm26158-201ENSMUST00000158973 119 ntBASIC1.11□□□□□ -2.23
Sp140Q6NSQ5 Gm44602-201ENSMUST00000205948 132 ntBASIC1.11□□□□□ -2.23
Sp140Q6NSQ5 Gm26202-201ENSMUST00000082910 65 ntBASIC1.11□□□□□ -2.23
Sp140Q6NSQ5 Mir30a-201ENSMUST00000083471 71 ntBASIC1.11□□□□□ -2.23
Sp140Q6NSQ5 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
Sp140Q6NSQ5 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.1□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 318.8 ms