Protein–RNA interactions for Protein: Q62442

Vamp1, Vesicle-associated membrane protein 1, mousemouse

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1Q62442 Snord32a-201ENSMUST00000083285 83 ntBASIC1.3□□□□□ -2.2
Vamp1Q62442 Gm23917-201ENSMUST00000175256 98 ntBASIC1.29□□□□□ -2.2
Vamp1Q62442 Mir33-201ENSMUST00000083531 69 ntBASIC1.29□□□□□ -2.2
Vamp1Q62442 Gm5581-201ENSMUST00000072940 2550 ntBASIC1.28□□□□□ -2.2
Vamp1Q62442 Gm22003-201ENSMUST00000101885 107 ntBASIC1.28□□□□□ -2.2
Vamp1Q62442 Gm22786-201ENSMUST00000104086 122 ntBASIC1.28□□□□□ -2.2
Vamp1Q62442 Gm26181-201ENSMUST00000157687 106 ntBASIC1.28□□□□□ -2.2
Vamp1Q62442 Gm26089-201ENSMUST00000157898 107 ntBASIC1.28□□□□□ -2.2
Vamp1Q62442 Gm22541-201ENSMUST00000158165 127 ntBASIC1.28□□□□□ -2.2
Vamp1Q62442 Gm25600-201ENSMUST00000158357 106 ntBASIC1.28□□□□□ -2.2
Vamp1Q62442 Gm22756-201ENSMUST00000180118 107 ntBASIC1.28□□□□□ -2.2
Vamp1Q62442 Mir7017-201ENSMUST00000184894 62 ntBASIC1.28□□□□□ -2.2
Vamp1Q62442 Mir3569-201ENSMUST00000185080 58 ntBASIC1.28□□□□□ -2.2
Vamp1Q62442 Gm26054-201ENSMUST00000083037 107 ntBASIC1.28□□□□□ -2.2
Vamp1Q62442 Gm25138-201ENSMUST00000083248 136 ntBASIC1.28□□□□□ -2.2
Vamp1Q62442 Gm24492-201ENSMUST00000083798 107 ntBASIC1.28□□□□□ -2.2
Vamp1Q62442 Snord80-201ENSMUST00000083801 81 ntBASIC1.28□□□□□ -2.2
Vamp1Q62442 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.21
Vamp1Q62442 Gm15115-201ENSMUST00000121145 264 ntBASIC1.27□□□□□ -2.21
Vamp1Q62442 Gm24129-201ENSMUST00000158537 97 ntBASIC1.27□□□□□ -2.21
Vamp1Q62442 Gm37579-201ENSMUST00000194291 142 ntBASIC1.27□□□□□ -2.21
Vamp1Q62442 Gm43977-201ENSMUST00000203970 189 ntBASIC1.27□□□□□ -2.21
Vamp1Q62442 Gm44211-201ENSMUST00000204867 145 ntBASIC1.27□□□□□ -2.21
Vamp1Q62442 Gm24234-201ENSMUST00000104316 107 ntBASIC1.26□□□□□ -2.21
Vamp1Q62442 Gm22212-201ENSMUST00000158096 106 ntBASIC1.26□□□□□ -2.21
Vamp1Q62442 Gm25618-201ENSMUST00000179484 107 ntBASIC1.26□□□□□ -2.21
Vamp1Q62442 Mir6997-201ENSMUST00000184313 71 ntBASIC1.26□□□□□ -2.21
Vamp1Q62442 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
Vamp1Q62442 Gm37824-201ENSMUST00000193430 3236 ntBASIC1.25□□□□□ -2.21
Vamp1Q62442 Gm25938-201ENSMUST00000104139 166 ntBASIC1.25□□□□□ -2.21
Vamp1Q62442 Gm11694-201ENSMUST00000118637 159 ntBASIC1.25□□□□□ -2.21
Vamp1Q62442 Gm23644-201ENSMUST00000157856 77 ntBASIC1.25□□□□□ -2.21
Vamp1Q62442 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC1.25□□□□□ -2.21
Vamp1Q62442 Gm22030-201ENSMUST00000116942 63 ntBASIC1.24□□□□□ -2.21
Vamp1Q62442 n-R5s6-201ENSMUST00000122663 88 ntBASIC1.24□□□□□ -2.21
Vamp1Q62442 Gm22089-201ENSMUST00000158336 102 ntBASIC1.24□□□□□ -2.21
Vamp1Q62442 Gm25836-201ENSMUST00000158918 123 ntBASIC1.24□□□□□ -2.21
Vamp1Q62442 Gm26379-202ENSMUST00000200225 132 ntBASIC1.24□□□□□ -2.21
Vamp1Q62442 Gm44602-201ENSMUST00000205948 132 ntBASIC1.24□□□□□ -2.21
Vamp1Q62442 Gm23344-201ENSMUST00000083818 68 ntBASIC1.24□□□□□ -2.21
Vamp1Q62442 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
Vamp1Q62442 Gm26421-201ENSMUST00000104279 132 ntBASIC1.23□□□□□ -2.21
Vamp1Q62442 Gm23989-201ENSMUST00000117030 66 ntBASIC1.23□□□□□ -2.21
Vamp1Q62442 Gm23670-201ENSMUST00000157469 119 ntBASIC1.23□□□□□ -2.21
Vamp1Q62442 Gm23221-201ENSMUST00000158118 93 ntBASIC1.23□□□□□ -2.21
Vamp1Q62442 Gm26133-201ENSMUST00000157363 100 ntBASIC1.22□□□□□ -2.21
Vamp1Q62442 Gm24076-201ENSMUST00000158179 94 ntBASIC1.22□□□□□ -2.21
Vamp1Q62442 Gm24177-201ENSMUST00000158927 131 ntBASIC1.22□□□□□ -2.21
Vamp1Q62442 Mir7091-201ENSMUST00000184075 79 ntBASIC1.22□□□□□ -2.21
Vamp1Q62442 Mir7009-201ENSMUST00000184519 64 ntBASIC1.22□□□□□ -2.21
Vamp1Q62442 Mir301b-201ENSMUST00000102333 97 ntBASIC1.21□□□□□ -2.22
Vamp1Q62442 Gm23558-201ENSMUST00000157823 80 ntBASIC1.21□□□□□ -2.22
Vamp1Q62442 Mir7225-201ENSMUST00000184178 54 ntBASIC1.21□□□□□ -2.22
Vamp1Q62442 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.21□□□□□ -2.22
Vamp1Q62442 Gm23010-201ENSMUST00000104151 126 ntBASIC1.2□□□□□ -2.22
Vamp1Q62442 Gm25380-201ENSMUST00000175463 107 ntBASIC1.2□□□□□ -2.22
Vamp1Q62442 Gm24641-201ENSMUST00000178055 107 ntBASIC1.2□□□□□ -2.22
Vamp1Q62442 Gm25484-201ENSMUST00000178217 107 ntBASIC1.2□□□□□ -2.22
Vamp1Q62442 Gm26138-201ENSMUST00000179236 107 ntBASIC1.2□□□□□ -2.22
Vamp1Q62442 Gm22821-201ENSMUST00000179288 107 ntBASIC1.2□□□□□ -2.22
Vamp1Q62442 Gm27297-201ENSMUST00000183395 105 ntBASIC1.2□□□□□ -2.22
Vamp1Q62442 Gm23140-201ENSMUST00000082487 107 ntBASIC1.2□□□□□ -2.22
Vamp1Q62442 Gm23298-201ENSMUST00000083181 107 ntBASIC1.2□□□□□ -2.22
Vamp1Q62442 Gm24614-201ENSMUST00000083269 107 ntBASIC1.2□□□□□ -2.22
Vamp1Q62442 Gm22057-201ENSMUST00000083387 107 ntBASIC1.2□□□□□ -2.22
Vamp1Q62442 Gm25516-201ENSMUST00000083857 107 ntBASIC1.2□□□□□ -2.22
Vamp1Q62442 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.2□□□□□ -2.22
Vamp1Q62442 Mir695-201ENSMUST00000102261 109 ntBASIC1.19□□□□□ -2.22
Vamp1Q62442 Gm23900-201ENSMUST00000157569 108 ntBASIC1.19□□□□□ -2.22
Vamp1Q62442 Gm23065-201ENSMUST00000158236 130 ntBASIC1.19□□□□□ -2.22
Vamp1Q62442 Scarna3a-201ENSMUST00000158911 140 ntBASIC1.19□□□□□ -2.22
Vamp1Q62442 Mir7679-201ENSMUST00000183379 63 ntBASIC1.19□□□□□ -2.22
Vamp1Q62442 Gm22004-201ENSMUST00000101884 107 ntBASIC1.18□□□□□ -2.22
Vamp1Q62442 Mir758-201ENSMUST00000103260 81 ntBASIC1.18□□□□□ -2.22
Vamp1Q62442 Gm23661-201ENSMUST00000122630 87 ntBASIC1.18□□□□□ -2.22
Vamp1Q62442 Mir376b-201ENSMUST00000195930 82 ntBASIC1.18□□□□□ -2.22
Vamp1Q62442 Gm45197-201ENSMUST00000205288 151 ntBASIC1.18□□□□□ -2.22
Vamp1Q62442 Mir377-201ENSMUST00000083504 68 ntBASIC1.18□□□□□ -2.22
Vamp1Q62442 Gm23950-201ENSMUST00000104026 129 ntBASIC1.17□□□□□ -2.22
Vamp1Q62442 n-R5s159-201ENSMUST00000122681 120 ntBASIC1.17□□□□□ -2.22
Vamp1Q62442 Gm24009-201ENSMUST00000157734 93 ntBASIC1.17□□□□□ -2.22
Vamp1Q62442 Gm25014-201ENSMUST00000158401 103 ntBASIC1.17□□□□□ -2.22
Vamp1Q62442 Gm25974-201ENSMUST00000158701 94 ntBASIC1.17□□□□□ -2.22
Vamp1Q62442 Mir7010-201ENSMUST00000183464 63 ntBASIC1.17□□□□□ -2.22
Vamp1Q62442 Mir6342-201ENSMUST00000183870 125 ntBASIC1.17□□□□□ -2.22
Vamp1Q62442 mt-Tv-201ENSMUST00000082389 69 ntBASIC1.17□□□□□ -2.22
Vamp1Q62442 mt-Tc-201ENSMUST00000082400 66 ntBASIC1.17□□□□□ -2.22
Vamp1Q62442 Gm23048-201ENSMUST00000157237 129 ntBASIC1.16□□□□□ -2.22
Vamp1Q62442 Gm22706-201ENSMUST00000157907 112 ntBASIC1.16□□□□□ -2.22
Vamp1Q62442 Mir6352-201ENSMUST00000184495 116 ntBASIC1.16□□□□□ -2.22
Vamp1Q62442 Gm25337-201ENSMUST00000083723 104 ntBASIC1.16□□□□□ -2.22
Vamp1Q62442 Gm26109-201ENSMUST00000083970 70 ntBASIC1.16□□□□□ -2.22
Vamp1Q62442 Mir362-201ENSMUST00000093592 65 ntBASIC1.16□□□□□ -2.22
Vamp1Q62442 Gm26338-201ENSMUST00000102372 110 ntBASIC1.15□□□□□ -2.23
Vamp1Q62442 Gm24865-201ENSMUST00000103246 96 ntBASIC1.15□□□□□ -2.23
Vamp1Q62442 Mir669n-201ENSMUST00000158636 54 ntBASIC1.15□□□□□ -2.23
Vamp1Q62442 Gm23289-201ENSMUST00000175615 108 ntBASIC1.15□□□□□ -2.23
Vamp1Q62442 Gm28435-201ENSMUST00000185496 108 ntBASIC1.15□□□□□ -2.23
Vamp1Q62442 Gm18433-201ENSMUST00000192747 197 ntBASIC1.15□□□□□ -2.23
Vamp1Q62442 Gm38274-201ENSMUST00000195689 148 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 140.9 ms