Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Mir7-1-201ENSMUST00000083500 108 ntBASIC1,3□□□□□ -2,2
CtcfQ61164 Gm13231-201ENSMUST00000119218 2850 ntBASIC1,29□□□□□ -2,2
CtcfQ61164 Gm25610-201ENSMUST00000104016 129 ntBASIC1,29□□□□□ -2,2
CtcfQ61164 n-R5s39-201ENSMUST00000122613 108 ntBASIC1,29□□□□□ -2,2
CtcfQ61164 Gm24649-201ENSMUST00000157106 134 ntBASIC1,29□□□□□ -2,2
CtcfQ61164 Gm22815-201ENSMUST00000157451 62 ntBASIC1,29□□□□□ -2,2
CtcfQ61164 Gm24947-201ENSMUST00000158334 110 ntBASIC1,29□□□□□ -2,2
CtcfQ61164 Gm25838-201ENSMUST00000158920 120 ntBASIC1,29□□□□□ -2,2
CtcfQ61164 AC139186.1-201ENSMUST00000197610 94 ntBASIC1,29□□□□□ -2,2
CtcfQ61164 Gm23299-201ENSMUST00000082708 79 ntBASIC1,29□□□□□ -2,2
CtcfQ61164 Mir10b-201ENSMUST00000083566 68 ntBASIC1,29□□□□□ -2,2
CtcfQ61164 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1,28□□□□□ -2,2
CtcfQ61164 Gm22074-201ENSMUST00000158595 113 ntBASIC1,28□□□□□ -2,2
CtcfQ61164 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC1,28□□□□□ -2,2
CtcfQ61164 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1,27□□□□□ -2,21
CtcfQ61164 Gm42935-201ENSMUST00000202004 151 ntBASIC1,27□□□□□ -2,21
CtcfQ61164 Gm25887-201ENSMUST00000157777 84 ntBASIC1,26□□□□□ -2,21
CtcfQ61164 Gm23838-201ENSMUST00000158067 162 ntBASIC1,26□□□□□ -2,21
CtcfQ61164 Mir6369-201ENSMUST00000183772 106 ntBASIC1,26□□□□□ -2,21
CtcfQ61164 Gm27420-201ENSMUST00000183823 79 ntBASIC1,26□□□□□ -2,21
CtcfQ61164 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC1,26□□□□□ -2,21
CtcfQ61164 Gm23244-201ENSMUST00000083375 92 ntBASIC1,26□□□□□ -2,21
CtcfQ61164 Gm24555-201ENSMUST00000104548 124 ntBASIC1,25□□□□□ -2,21
CtcfQ61164 Gm24509-201ENSMUST00000157086 101 ntBASIC1,25□□□□□ -2,21
CtcfQ61164 Gm24650-201ENSMUST00000157105 103 ntBASIC1,25□□□□□ -2,21
CtcfQ61164 Gm22319-201ENSMUST00000157147 122 ntBASIC1,25□□□□□ -2,21
CtcfQ61164 Gm25358-201ENSMUST00000157189 101 ntBASIC1,25□□□□□ -2,21
CtcfQ61164 Gm23384-201ENSMUST00000158593 103 ntBASIC1,25□□□□□ -2,21
CtcfQ61164 Mir21c-201ENSMUST00000184910 78 ntBASIC1,25□□□□□ -2,21
CtcfQ61164 Mir196b-201ENSMUST00000083509 85 ntBASIC1,25□□□□□ -2,21
CtcfQ61164 Gm15654-201ENSMUST00000152660 300 ntBASIC1,24□□□□□ -2,21
CtcfQ61164 Gm23601-201ENSMUST00000157259 131 ntBASIC1,24□□□□□ -2,21
CtcfQ61164 Gm25663-201ENSMUST00000157698 135 ntBASIC1,24□□□□□ -2,21
CtcfQ61164 Gm27419-201ENSMUST00000184576 109 ntBASIC1,24□□□□□ -2,21
CtcfQ61164 Mir532-201ENSMUST00000093630 96 ntBASIC1,24□□□□□ -2,21
CtcfQ61164 Gm22780-201ENSMUST00000104084 132 ntBASIC1,23□□□□□ -2,21
CtcfQ61164 Gm25497-201ENSMUST00000104425 132 ntBASIC1,23□□□□□ -2,21
CtcfQ61164 Gm23106-201ENSMUST00000157554 101 ntBASIC1,23□□□□□ -2,21
CtcfQ61164 Gm22089-201ENSMUST00000158336 102 ntBASIC1,23□□□□□ -2,21
CtcfQ61164 Gm23763-201ENSMUST00000158345 60 ntBASIC1,23□□□□□ -2,21
CtcfQ61164 Gm23351-201ENSMUST00000158427 125 ntBASIC1,23□□□□□ -2,21
CtcfQ61164 Gm25166-201ENSMUST00000158909 111 ntBASIC1,23□□□□□ -2,21
CtcfQ61164 Gm23636-201ENSMUST00000175070 95 ntBASIC1,23□□□□□ -2,21
CtcfQ61164 Gm22802-201ENSMUST00000175621 89 ntBASIC1,23□□□□□ -2,21
CtcfQ61164 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC1,23□□□□□ -2,21
CtcfQ61164 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC1,22□□□□□ -2,21
CtcfQ61164 Gm24271-201ENSMUST00000102327 111 ntBASIC1,22□□□□□ -2,21
CtcfQ61164 Gm25370-201ENSMUST00000158159 94 ntBASIC1,22□□□□□ -2,21
CtcfQ61164 Gm25768-201ENSMUST00000158570 98 ntBASIC1,22□□□□□ -2,21
CtcfQ61164 Gm16550-201ENSMUST00000162550 126 ntBASIC1,22□□□□□ -2,21
CtcfQ61164 Gm27365-201ENSMUST00000184041 177 ntBASIC1,22□□□□□ -2,21
CtcfQ61164 Gm42533-201ENSMUST00000196247 157 ntBASIC1,22□□□□□ -2,21
CtcfQ61164 1700127F24Rik-202ENSMUST00000223214 259 ntTSL 3 BASIC1,22□□□□□ -2,21
CtcfQ61164 Gm22980-201ENSMUST00000082608 70 ntBASIC1,22□□□□□ -2,21
CtcfQ61164 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1,22□□□□□ -2,21
CtcfQ61164 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1,22□□□□□ -2,21
CtcfQ61164 Gm24579-201ENSMUST00000103964 144 ntBASIC1,21□□□□□ -2,22
CtcfQ61164 Gm23986-201ENSMUST00000157144 63 ntBASIC1,21□□□□□ -2,22
CtcfQ61164 Gm24772-201ENSMUST00000158507 110 ntBASIC1,21□□□□□ -2,22
CtcfQ61164 Gm24020-201ENSMUST00000180156 108 ntBASIC1,21□□□□□ -2,22
CtcfQ61164 Mir7091-201ENSMUST00000184075 79 ntBASIC1,21□□□□□ -2,22
CtcfQ61164 Gm26224-201ENSMUST00000082506 80 ntBASIC1,21□□□□□ -2,22
CtcfQ61164 Gm24524-201ENSMUST00000082925 170 ntBASIC1,21□□□□□ -2,22
CtcfQ61164 AC158598.2-201ENSMUST00000213397 3832 ntBASIC1,2□□□□□ -2,22
CtcfQ61164 Gm23126-201ENSMUST00000104260 134 ntBASIC1,2□□□□□ -2,22
CtcfQ61164 Gm14039-201ENSMUST00000118705 101 ntBASIC1,2□□□□□ -2,22
CtcfQ61164 Gm6985-201ENSMUST00000121255 271 ntBASIC1,2□□□□□ -2,22
CtcfQ61164 Mir1904-201ENSMUST00000122702 80 ntBASIC1,2□□□□□ -2,22
CtcfQ61164 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC1,2□□□□□ -2,22
CtcfQ61164 Mir6381-201ENSMUST00000183426 87 ntBASIC1,2□□□□□ -2,22
CtcfQ61164 Mir30f-201ENSMUST00000196073 92 ntBASIC1,2□□□□□ -2,22
CtcfQ61164 Gm43977-201ENSMUST00000203970 189 ntBASIC1,2□□□□□ -2,22
CtcfQ61164 Mir1a-1-201ENSMUST00000093635 77 ntBASIC1,2□□□□□ -2,22
CtcfQ61164 Gm26253-201ENSMUST00000122493 103 ntBASIC1,19□□□□□ -2,22
CtcfQ61164 Gm22429-201ENSMUST00000158553 130 ntBASIC1,19□□□□□ -2,22
CtcfQ61164 Gm16307-201ENSMUST00000161269 210 ntBASIC1,19□□□□□ -2,22
CtcfQ61164 Gm22914-201ENSMUST00000175195 77 ntBASIC1,19□□□□□ -2,22
CtcfQ61164 Gm24575-201ENSMUST00000175502 77 ntBASIC1,19□□□□□ -2,22
CtcfQ61164 Gm28862-201ENSMUST00000188246 163 ntBASIC1,19□□□□□ -2,22
CtcfQ61164 Mir20b-201ENSMUST00000102087 80 ntBASIC1,18□□□□□ -2,22
CtcfQ61164 Mir802-201ENSMUST00000103258 97 ntBASIC1,18□□□□□ -2,22
CtcfQ61164 Gm16265-201ENSMUST00000134558 108 ntBASIC1,18□□□□□ -2,22
CtcfQ61164 Gm26363-201ENSMUST00000158866 83 ntBASIC1,18□□□□□ -2,22
CtcfQ61164 Gm22887-201ENSMUST00000178586 107 ntBASIC1,18□□□□□ -2,22
CtcfQ61164 AC122769.2-201ENSMUST00000227248 302 ntBASIC1,18□□□□□ -2,22
CtcfQ61164 Mir22-201ENSMUST00000083595 95 ntBASIC1,18□□□□□ -2,22
CtcfQ61164 Gm25650-201ENSMUST00000083784 162 ntBASIC1,18□□□□□ -2,22
CtcfQ61164 Snord80-201ENSMUST00000083801 81 ntBASIC1,18□□□□□ -2,22
CtcfQ61164 Scarna9-201ENSMUST00000104318 70 ntBASIC1,17□□□□□ -2,22
CtcfQ61164 n-R5s63-201ENSMUST00000122756 103 ntBASIC1,17□□□□□ -2,22
CtcfQ61164 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1,16□□□□□ -2,22
CtcfQ61164 n-R5s157-201ENSMUST00000122543 121 ntBASIC1,16□□□□□ -2,22
CtcfQ61164 Gm22233-201ENSMUST00000157464 114 ntBASIC1,16□□□□□ -2,22
CtcfQ61164 Gm23065-201ENSMUST00000158236 130 ntBASIC1,16□□□□□ -2,22
CtcfQ61164 Gm25868-201ENSMUST00000158253 114 ntBASIC1,16□□□□□ -2,22
CtcfQ61164 Trbv25-201ENSMUST00000194700 273 ntBASIC1,16□□□□□ -2,22
CtcfQ61164 Gm44932-201ENSMUST00000206799 121 ntBASIC1,16□□□□□ -2,22
CtcfQ61164 AC166341.8-201ENSMUST00000221267 108 ntBASIC1,16□□□□□ -2,22
CtcfQ61164 Gm25899-201ENSMUST00000082672 141 ntBASIC1,16□□□□□ -2,22
CtcfQ61164 Gm22809-201ENSMUST00000082743 156 ntBASIC1,16□□□□□ -2,22
Retrieved 100 of 76,532 protein–RNA pairs in 109,1 ms