Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 Gm44328-201ENSMUST00000199331 75 ntBASIC-0.11□□□□□ -2.43
Usf1Q61069 Gm44803-201ENSMUST00000204384 156 ntBASIC-0.11□□□□□ -2.43
Usf1Q61069 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.11□□□□□ -2.43
Usf1Q61069 Mir669g-201ENSMUST00000116809 123 ntBASIC-0.12□□□□□ -2.43
Usf1Q61069 Gm25772-201ENSMUST00000158574 56 ntBASIC-0.12□□□□□ -2.43
Usf1Q61069 Gm18665-201ENSMUST00000189783 270 ntBASIC-0.12□□□□□ -2.43
Usf1Q61069 mt-Tl1-201ENSMUST00000082391 75 ntBASIC-0.12□□□□□ -2.43
Usf1Q61069 Snord85-201ENSMUST00000083262 73 ntBASIC-0.12□□□□□ -2.43
Usf1Q61069 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC-0.12□□□□□ -2.43
Usf1Q61069 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC-0.13□□□□□ -2.43
Usf1Q61069 Gm22675-201ENSMUST00000158430 104 ntBASIC-0.13□□□□□ -2.43
Usf1Q61069 Gm25974-201ENSMUST00000158701 94 ntBASIC-0.13□□□□□ -2.43
Usf1Q61069 Gm27792-201ENSMUST00000184031 115 ntBASIC-0.13□□□□□ -2.43
Usf1Q61069 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC-0.13□□□□□ -2.43
Usf1Q61069 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC-0.13□□□□□ -2.43
Usf1Q61069 Gm22981-201ENSMUST00000082611 75 ntBASIC-0.13□□□□□ -2.43
Usf1Q61069 Gm26202-201ENSMUST00000082910 65 ntBASIC-0.13□□□□□ -2.43
Usf1Q61069 Snord61-201ENSMUST00000083176 71 ntBASIC-0.13□□□□□ -2.43
Usf1Q61069 Gm24522-201ENSMUST00000083964 108 ntBASIC-0.13□□□□□ -2.43
Usf1Q61069 Gm23901-201ENSMUST00000157570 107 ntBASIC-0.14□□□□□ -2.43
Usf1Q61069 Mir3967-201ENSMUST00000198710 68 ntBASIC-0.14□□□□□ -2.43
Usf1Q61069 Snord80-202ENSMUST00000199023 77 ntBASIC-0.14□□□□□ -2.43
Usf1Q61069 Gm44327-201ENSMUST00000200068 117 ntBASIC-0.14□□□□□ -2.43
Usf1Q61069 Mir126a-201ENSMUST00000083606 73 ntBASIC-0.14□□□□□ -2.43
Usf1Q61069 Gm25980-201ENSMUST00000157176 218 ntBASIC-0.15□□□□□ -2.43
Usf1Q61069 Gm23258-201ENSMUST00000158319 106 ntBASIC-0.15□□□□□ -2.43
Usf1Q61069 Gm23977-201ENSMUST00000177871 74 ntBASIC-0.15□□□□□ -2.43
Usf1Q61069 Gm27465-201ENSMUST00000184290 91 ntBASIC-0.15□□□□□ -2.43
Usf1Q61069 Mir214-201ENSMUST00000083582 110 ntBASIC-0.15□□□□□ -2.43
Usf1Q61069 Gm25307-201ENSMUST00000158885 106 ntBASIC-0.16□□□□□ -2.44
Usf1Q61069 Gm22327-201ENSMUST00000158899 108 ntBASIC-0.16□□□□□ -2.44
Usf1Q61069 Gm27803-201ENSMUST00000183763 119 ntBASIC-0.16□□□□□ -2.44
Usf1Q61069 Gm29432-201ENSMUST00000185397 139 ntBASIC-0.16□□□□□ -2.44
Usf1Q61069 Gm25482-201ENSMUST00000083225 107 ntBASIC-0.16□□□□□ -2.44
Usf1Q61069 Gm25629-201ENSMUST00000084001 107 ntBASIC-0.16□□□□□ -2.44
Usf1Q61069 Gm24796-201ENSMUST00000104007 107 ntBASIC-0.17□□□□□ -2.44
Usf1Q61069 Gm26156-201ENSMUST00000116999 123 ntBASIC-0.17□□□□□ -2.44
Usf1Q61069 Gm26403-201ENSMUST00000158500 105 ntBASIC-0.17□□□□□ -2.44
Usf1Q61069 Mir3470a-201ENSMUST00000175223 77 ntBASIC-0.17□□□□□ -2.44
Usf1Q61069 Gm27332-201ENSMUST00000184893 112 ntBASIC-0.17□□□□□ -2.44
Usf1Q61069 Gm44922-201ENSMUST00000206690 90 ntBASIC-0.17□□□□□ -2.44
Usf1Q61069 Gm22757-201ENSMUST00000102279 96 ntBASIC-0.18□□□□□ -2.44
Usf1Q61069 Gm44489-201ENSMUST00000104619 97 ntBASIC-0.18□□□□□ -2.44
Usf1Q61069 Mir1298-201ENSMUST00000116681 98 ntBASIC-0.18□□□□□ -2.44
Usf1Q61069 Gm27297-201ENSMUST00000183395 105 ntBASIC-0.18□□□□□ -2.44
Usf1Q61069 Gm43927-201ENSMUST00000204599 117 ntBASIC-0.18□□□□□ -2.44
Usf1Q61069 Gm23970-201ENSMUST00000083319 107 ntBASIC-0.18□□□□□ -2.44
Usf1Q61069 Gm23788-201ENSMUST00000122535 106 ntBASIC-0.19□□□□□ -2.44
Usf1Q61069 Gm24884-201ENSMUST00000158784 119 ntBASIC-0.19□□□□□ -2.44
Usf1Q61069 Mir6375-201ENSMUST00000197176 95 ntBASIC-0.19□□□□□ -2.44
Usf1Q61069 Mir3065-201ENSMUST00000198674 87 ntBASIC-0.19□□□□□ -2.44
Usf1Q61069 Gm26204-201ENSMUST00000082906 107 ntBASIC-0.19□□□□□ -2.44
Usf1Q61069 Gm25791-201ENSMUST00000083292 137 ntBASIC-0.19□□□□□ -2.44
Usf1Q61069 Mir142b-201ENSMUST00000083486 115 ntBASIC-0.19□□□□□ -2.44
Usf1Q61069 Mirlet7d-201ENSMUST00000083519 103 ntBASIC-0.19□□□□□ -2.44
Usf1Q61069 Gm22100-201ENSMUST00000157926 63 ntBASIC-0.2□□□□□ -2.44
Usf1Q61069 Gm22967-201ENSMUST00000157956 239 ntBASIC-0.2□□□□□ -2.44
Usf1Q61069 Gm22348-201ENSMUST00000178674 79 ntBASIC-0.2□□□□□ -2.44
Usf1Q61069 Gm42845-201ENSMUST00000197766 105 ntBASIC-0.2□□□□□ -2.44
Usf1Q61069 Gm44602-201ENSMUST00000205948 132 ntBASIC-0.2□□□□□ -2.44
Usf1Q61069 Gm45002-201ENSMUST00000208045 120 ntBASIC-0.2□□□□□ -2.44
Usf1Q61069 Gm45617-201ENSMUST00000211132 209 ntBASIC-0.2□□□□□ -2.44
Usf1Q61069 Gm25802-201ENSMUST00000082639 77 ntBASIC-0.2□□□□□ -2.44
Usf1Q61069 Gm22509-201ENSMUST00000082775 107 ntBASIC-0.2□□□□□ -2.44
Usf1Q61069 Gm23482-201ENSMUST00000104172 122 ntBASIC-0.21□□□□□ -2.44
Usf1Q61069 Gm26426-201ENSMUST00000177866 123 ntBASIC-0.21□□□□□ -2.44
Usf1Q61069 Gm26060-201ENSMUST00000180094 123 ntBASIC-0.21□□□□□ -2.44
Usf1Q61069 Gm22813-201ENSMUST00000199948 123 ntBASIC-0.21□□□□□ -2.44
Usf1Q61069 Gm23509-201ENSMUST00000083080 160 ntBASIC-0.21□□□□□ -2.44
Usf1Q61069 n-R5s12-201ENSMUST00000083785 119 ntBASIC-0.21□□□□□ -2.44
Usf1Q61069 Gm21940-201ENSMUST00000204940 2278 ntBASIC-0.22□□□□□ -2.44
Usf1Q61069 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC-0.22□□□□□ -2.44
Usf1Q61069 Snord91a-201ENSMUST00000104305 93 ntBASIC-0.22□□□□□ -2.44
Usf1Q61069 Gm23661-201ENSMUST00000122630 87 ntBASIC-0.22□□□□□ -2.44
Usf1Q61069 Gm25596-201ENSMUST00000178368 107 ntBASIC-0.22□□□□□ -2.44
Usf1Q61069 Mir216b-201ENSMUST00000102363 86 ntBASIC-0.23□□□□□ -2.45
Usf1Q61069 Gm22105-201ENSMUST00000116734 116 ntBASIC-0.23□□□□□ -2.45
Usf1Q61069 Snord49b-201ENSMUST00000082503 72 ntBASIC-0.23□□□□□ -2.45
Usf1Q61069 Gm23303-201ENSMUST00000082714 152 ntBASIC-0.23□□□□□ -2.45
Usf1Q61069 Gm25756-201ENSMUST00000103990 136 ntBASIC-0.24□□□□□ -2.45
Usf1Q61069 Gm24009-201ENSMUST00000157734 93 ntBASIC-0.24□□□□□ -2.45
Usf1Q61069 Gm22989-201ENSMUST00000158313 86 ntBASIC-0.24□□□□□ -2.45
Usf1Q61069 Mir21b-201ENSMUST00000184317 108 ntBASIC-0.24□□□□□ -2.45
Usf1Q61069 Gm37624-201ENSMUST00000193751 219 ntBASIC-0.24□□□□□ -2.45
Usf1Q61069 Gm6607-201ENSMUST00000215035 328 ntBASIC-0.24□□□□□ -2.45
Usf1Q61069 Mir471-201ENSMUST00000093596 67 ntBASIC-0.24□□□□□ -2.45
Usf1Q61069 Mir487b-201ENSMUST00000102265 82 ntBASIC-0.25□□□□□ -2.45
Usf1Q61069 n-R5s171-201ENSMUST00000104128 79 ntBASIC-0.25□□□□□ -2.45
Usf1Q61069 Gm11694-201ENSMUST00000118637 159 ntBASIC-0.25□□□□□ -2.45
Usf1Q61069 Gm22788-201ENSMUST00000157876 61 ntBASIC-0.25□□□□□ -2.45
Usf1Q61069 Gm17020-201ENSMUST00000172274 274 ntBASIC-0.25□□□□□ -2.45
Usf1Q61069 mt-Tc-201ENSMUST00000082400 66 ntBASIC-0.25□□□□□ -2.45
Usf1Q61069 Gm11644-201ENSMUST00000119735 150 ntBASIC-0.26□□□□□ -2.45
Usf1Q61069 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC-0.26□□□□□ -2.45
Usf1Q61069 Gm26395-201ENSMUST00000104094 132 ntBASIC-0.27□□□□□ -2.45
Usf1Q61069 Gm26210-201ENSMUST00000158680 91 ntBASIC-0.27□□□□□ -2.45
Usf1Q61069 Gm26097-201ENSMUST00000179642 93 ntBASIC-0.27□□□□□ -2.45
Usf1Q61069 Snora16a-202ENSMUST00000196061 137 ntBASIC-0.27□□□□□ -2.45
Usf1Q61069 AC124687.1-201ENSMUST00000221868 189 ntBASIC-0.27□□□□□ -2.45
Usf1Q61069 AC154390.1-201ENSMUST00000225629 277 ntBASIC-0.27□□□□□ -2.45
Retrieved 100 of 76,532 protein–RNA pairs in 137 ms