Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Gm23262-201ENSMUST00000158323 168 ntBASIC-1.97□□□□□ -2.72
Trav3-1Q5R1I8 Gm23630-201ENSMUST00000175292 104 ntBASIC-1.97□□□□□ -2.72
Trav3-1Q5R1I8 Gm25248-201ENSMUST00000175473 98 ntBASIC-1.97□□□□□ -2.72
Trav3-1Q5R1I8 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC-1.97□□□□□ -2.72
Trav3-1Q5R1I8 Mir181b-2-201ENSMUST00000083644 89 ntBASIC-1.97□□□□□ -2.72
Trav3-1Q5R1I8 Mir489-201ENSMUST00000093599 107 ntBASIC-1.97□□□□□ -2.72
Trav3-1Q5R1I8 Gm22984-201ENSMUST00000122751 122 ntBASIC-1.98□□□□□ -2.73
Trav3-1Q5R1I8 Gm22612-201ENSMUST00000158293 101 ntBASIC-1.98□□□□□ -2.73
Trav3-1Q5R1I8 Gm24877-201ENSMUST00000158779 116 ntBASIC-1.98□□□□□ -2.73
Trav3-1Q5R1I8 Gm23974-201ENSMUST00000083321 131 ntBASIC-1.98□□□□□ -2.73
Trav3-1Q5R1I8 Snord57-201ENSMUST00000083338 72 ntBASIC-1.98□□□□□ -2.73
Trav3-1Q5R1I8 Gm12924-201ENSMUST00000121747 318 ntBASIC-1.99□□□□□ -2.73
Trav3-1Q5R1I8 Cyp2j7-ps1-201ENSMUST00000122430 173 ntBASIC-1.99□□□□□ -2.73
Trav3-1Q5R1I8 Gm44589-201ENSMUST00000207025 115 ntBASIC-1.99□□□□□ -2.73
Trav3-1Q5R1I8 Mir9-2-201ENSMUST00000083490 72 ntBASIC-1.99□□□□□ -2.73
Trav3-1Q5R1I8 Snord16a-201ENSMUST00000083895 99 ntBASIC-1.99□□□□□ -2.73
Trav3-1Q5R1I8 Gm22595-201ENSMUST00000104250 130 ntBASIC-2□□□□□ -2.73
Trav3-1Q5R1I8 Gm22016-201ENSMUST00000158793 114 ntBASIC-2□□□□□ -2.73
Trav3-1Q5R1I8 Gm24459-201ENSMUST00000082730 86 ntBASIC-2□□□□□ -2.73
Trav3-1Q5R1I8 Gm26479-201ENSMUST00000122620 106 ntBASIC-2.01□□□□□ -2.73
Trav3-1Q5R1I8 Gm22203-201ENSMUST00000158605 58 ntBASIC-2.01□□□□□ -2.73
Trav3-1Q5R1I8 Gm26160-201ENSMUST00000158965 63 ntBASIC-2.01□□□□□ -2.73
Trav3-1Q5R1I8 CT030166.3-201ENSMUST00000223203 193 ntBASIC-2.01□□□□□ -2.73
Trav3-1Q5R1I8 mt-Ts1-201ENSMUST00000082403 69 ntBASIC-2.01□□□□□ -2.73
Trav3-1Q5R1I8 Gm24856-201ENSMUST00000082809 107 ntBASIC-2.01□□□□□ -2.73
Trav3-1Q5R1I8 Gm24521-201ENSMUST00000083958 107 ntBASIC-2.01□□□□□ -2.73
Trav3-1Q5R1I8 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC-2.02□□□□□ -2.73
Trav3-1Q5R1I8 Gm14293-201ENSMUST00000118528 577 ntBASIC-2.03□□□□□ -2.73
Trav3-1Q5R1I8 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC-2.03□□□□□ -2.73
Trav3-1Q5R1I8 Gm25184-201ENSMUST00000157753 163 ntBASIC-2.03□□□□□ -2.73
Trav3-1Q5R1I8 Mir6957-201ENSMUST00000183708 64 ntBASIC-2.03□□□□□ -2.73
Trav3-1Q5R1I8 Gm27446-201ENSMUST00000183963 89 ntBASIC-2.03□□□□□ -2.73
Trav3-1Q5R1I8 Gm22305-201ENSMUST00000082690 108 ntBASIC-2.03□□□□□ -2.73
Trav3-1Q5R1I8 Gm24461-201ENSMUST00000082735 103 ntBASIC-2.03□□□□□ -2.73
Trav3-1Q5R1I8 Gm23097-201ENSMUST00000083448 105 ntBASIC-2.03□□□□□ -2.73
Trav3-1Q5R1I8 Gm25652-201ENSMUST00000083780 103 ntBASIC-2.03□□□□□ -2.73
Trav3-1Q5R1I8 Gm24580-201ENSMUST00000103965 131 ntBASIC-2.04□□□□□ -2.74
Trav3-1Q5R1I8 Gm23320-201ENSMUST00000104462 127 ntBASIC-2.04□□□□□ -2.74
Trav3-1Q5R1I8 Gm24197-201ENSMUST00000175085 109 ntBASIC-2.04□□□□□ -2.74
Trav3-1Q5R1I8 Gm42677-201ENSMUST00000196363 127 ntBASIC-2.04□□□□□ -2.74
Trav3-1Q5R1I8 Gm25929-201ENSMUST00000082784 107 ntBASIC-2.04□□□□□ -2.74
Trav3-1Q5R1I8 Gm24983-201ENSMUST00000104457 69 ntBASIC-2.05□□□□□ -2.74
Trav3-1Q5R1I8 Gm22145-201ENSMUST00000157396 148 ntBASIC-2.05□□□□□ -2.74
Trav3-1Q5R1I8 Gm22430-201ENSMUST00000158546 107 ntBASIC-2.05□□□□□ -2.74
Trav3-1Q5R1I8 Gm43238-201ENSMUST00000196463 359 ntBASIC-2.05□□□□□ -2.74
Trav3-1Q5R1I8 Mup-ps5-201ENSMUST00000118667 99 ntBASIC-2.06□□□□□ -2.74
Trav3-1Q5R1I8 Gm26478-201ENSMUST00000122611 133 ntBASIC-2.06□□□□□ -2.74
Trav3-1Q5R1I8 Gm23601-201ENSMUST00000157259 131 ntBASIC-2.06□□□□□ -2.74
Trav3-1Q5R1I8 Gm24810-201ENSMUST00000175317 70 ntBASIC-2.06□□□□□ -2.74
Trav3-1Q5R1I8 Mir1839-201ENSMUST00000175366 127 ntBASIC-2.06□□□□□ -2.74
Trav3-1Q5R1I8 Gm22784-201ENSMUST00000104088 132 ntBASIC-2.07□□□□□ -2.74
Trav3-1Q5R1I8 Gm23779-201ENSMUST00000157938 64 ntBASIC-2.07□□□□□ -2.74
Trav3-1Q5R1I8 Gm25601-201ENSMUST00000158356 105 ntBASIC-2.07□□□□□ -2.74
Trav3-1Q5R1I8 Gm27997-201ENSMUST00000184942 69 ntBASIC-2.07□□□□□ -2.74
Trav3-1Q5R1I8 AC192091.2-201ENSMUST00000217869 117 ntBASIC-2.07□□□□□ -2.74
Trav3-1Q5R1I8 Cfap61-214ENSMUST00000167179 183 ntBASIC-2.08□□□□□ -2.74
Trav3-1Q5R1I8 Gm25235-201ENSMUST00000179933 107 ntBASIC-2.08□□□□□ -2.74
Trav3-1Q5R1I8 Gm23379-201ENSMUST00000180026 107 ntBASIC-2.08□□□□□ -2.74
Trav3-1Q5R1I8 Gm44490-201ENSMUST00000198566 127 ntBASIC-2.08□□□□□ -2.74
Trav3-1Q5R1I8 Gm25899-201ENSMUST00000082672 141 ntBASIC-2.08□□□□□ -2.74
Trav3-1Q5R1I8 Gm27784-201ENSMUST00000184926 113 ntBASIC-2.09□□□□□ -2.74
Trav3-1Q5R1I8 Mir23a-201ENSMUST00000083677 75 ntBASIC-2.09□□□□□ -2.74
Trav3-1Q5R1I8 Gm23941-201ENSMUST00000101953 107 ntBASIC-2.1□□□□□ -2.75
Trav3-1Q5R1I8 Mir764-201ENSMUST00000103259 108 ntBASIC-2.1□□□□□ -2.75
Trav3-1Q5R1I8 Gm16362-201ENSMUST00000135189 214 ntBASIC-2.1□□□□□ -2.75
Trav3-1Q5R1I8 Gm26104-201ENSMUST00000157250 108 ntBASIC-2.1□□□□□ -2.75
Trav3-1Q5R1I8 Gm43976-201ENSMUST00000203637 235 ntBASIC-2.1□□□□□ -2.75
Trav3-1Q5R1I8 AC134601.1-201ENSMUST00000221058 109 ntBASIC-2.1□□□□□ -2.75
Trav3-1Q5R1I8 Gm24316-201ENSMUST00000083041 107 ntBASIC-2.1□□□□□ -2.75
Trav3-1Q5R1I8 Gm25937-201ENSMUST00000083912 107 ntBASIC-2.1□□□□□ -2.75
Trav3-1Q5R1I8 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC-2.1□□□□□ -2.75
Trav3-1Q5R1I8 Gm24686-201ENSMUST00000157755 93 ntBASIC-2.11□□□□□ -2.75
Trav3-1Q5R1I8 Gm23316-201ENSMUST00000157997 114 ntBASIC-2.11□□□□□ -2.75
Trav3-1Q5R1I8 Mir8116-201ENSMUST00000184134 97 ntBASIC-2.11□□□□□ -2.75
Trav3-1Q5R1I8 Gm43038-201ENSMUST00000202359 88 ntBASIC-2.11□□□□□ -2.75
Trav3-1Q5R1I8 Gm24374-201ENSMUST00000104394 106 ntBASIC-2.12□□□□□ -2.75
Trav3-1Q5R1I8 Gm27723-201ENSMUST00000157398 63 ntBASIC-2.12□□□□□ -2.75
Trav3-1Q5R1I8 Gm25267-201ENSMUST00000158522 63 ntBASIC-2.12□□□□□ -2.75
Trav3-1Q5R1I8 Gm22406-201ENSMUST00000174923 93 ntBASIC-2.12□□□□□ -2.75
Trav3-1Q5R1I8 Mir7086-201ENSMUST00000183683 65 ntBASIC-2.12□□□□□ -2.75
Trav3-1Q5R1I8 Gm24091-201ENSMUST00000082550 83 ntBASIC-2.12□□□□□ -2.75
Trav3-1Q5R1I8 Gm24203-201ENSMUST00000082949 114 ntBASIC-2.12□□□□□ -2.75
Trav3-1Q5R1I8 Gm23711-201ENSMUST00000083856 83 ntBASIC-2.12□□□□□ -2.75
Trav3-1Q5R1I8 Gm22818-201ENSMUST00000157446 104 ntBASIC-2.13□□□□□ -2.75
Trav3-1Q5R1I8 Gm24501-201ENSMUST00000158452 62 ntBASIC-2.13□□□□□ -2.75
Trav3-1Q5R1I8 Gm24918-201ENSMUST00000083022 130 ntBASIC-2.13□□□□□ -2.75
Trav3-1Q5R1I8 Gm26056-201ENSMUST00000083043 104 ntBASIC-2.13□□□□□ -2.75
Trav3-1Q5R1I8 Gm23494-201ENSMUST00000116830 126 ntBASIC-2.14□□□□□ -2.75
Trav3-1Q5R1I8 Gm11388-201ENSMUST00000120908 159 ntBASIC-2.14□□□□□ -2.75
Trav3-1Q5R1I8 Gm22335-201ENSMUST00000157724 99 ntBASIC-2.14□□□□□ -2.75
Trav3-1Q5R1I8 Snord123-201ENSMUST00000158692 71 ntBASIC-2.14□□□□□ -2.75
Trav3-1Q5R1I8 Gm27977-201ENSMUST00000185159 111 ntBASIC-2.14□□□□□ -2.75
Trav3-1Q5R1I8 Gm25870-201ENSMUST00000179845 79 ntBASIC-2.15□□□□□ -2.75
Trav3-1Q5R1I8 Mir1298-201ENSMUST00000116681 98 ntBASIC-2.16□□□□□ -2.76
Trav3-1Q5R1I8 Gm24399-201ENSMUST00000157869 74 ntBASIC-2.16□□□□□ -2.76
Trav3-1Q5R1I8 Gm26262-201ENSMUST00000158024 127 ntBASIC-2.16□□□□□ -2.76
Trav3-1Q5R1I8 AC154390.1-201ENSMUST00000225629 277 ntBASIC-2.16□□□□□ -2.76
Trav3-1Q5R1I8 Gm24612-201ENSMUST00000083267 107 ntBASIC-2.16□□□□□ -2.76
Trav3-1Q5R1I8 Gm25410-201ENSMUST00000083758 137 ntBASIC-2.16□□□□□ -2.76
Trav3-1Q5R1I8 Gm6897-201ENSMUST00000117714 138 ntBASIC-2.17□□□□□ -2.76
Retrieved 100 of 76,532 protein–RNA pairs in 163.1 ms