Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Gm23344-201ENSMUST00000083818 68 ntBASIC1.56□□□□□ -2.16
Usp39Q3TIX9 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.56□□□□□ -2.16
Usp39Q3TIX9 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
Usp39Q3TIX9 Gm26181-201ENSMUST00000157687 106 ntBASIC1.55□□□□□ -2.16
Usp39Q3TIX9 Gm24174-201ENSMUST00000158933 111 ntBASIC1.55□□□□□ -2.16
Usp39Q3TIX9 Gm23967-201ENSMUST00000175062 78 ntBASIC1.55□□□□□ -2.16
Usp39Q3TIX9 Gm3702-201ENSMUST00000211754 346 ntBASIC1.55□□□□□ -2.16
Usp39Q3TIX9 Gm25038-201ENSMUST00000082928 130 ntBASIC1.55□□□□□ -2.16
Usp39Q3TIX9 Gm24203-201ENSMUST00000082949 114 ntBASIC1.55□□□□□ -2.16
Usp39Q3TIX9 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Usp39Q3TIX9 Gm25068-201ENSMUST00000103895 110 ntBASIC1.54□□□□□ -2.16
Usp39Q3TIX9 Gm23715-201ENSMUST00000157354 106 ntBASIC1.54□□□□□ -2.16
Usp39Q3TIX9 Gm27326-201ENSMUST00000183504 95 ntBASIC1.54□□□□□ -2.16
Usp39Q3TIX9 Gm28383-201ENSMUST00000187563 139 ntBASIC1.54□□□□□ -2.16
Usp39Q3TIX9 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.54□□□□□ -2.16
Usp39Q3TIX9 Gm25696-201ENSMUST00000082900 105 ntBASIC1.54□□□□□ -2.16
Usp39Q3TIX9 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.16
Usp39Q3TIX9 Gm23528-201ENSMUST00000104571 132 ntBASIC1.53□□□□□ -2.16
Usp39Q3TIX9 Gm24593-201ENSMUST00000122507 106 ntBASIC1.53□□□□□ -2.16
Usp39Q3TIX9 Gm23172-201ENSMUST00000157160 124 ntBASIC1.53□□□□□ -2.16
Usp39Q3TIX9 Gm24399-201ENSMUST00000157869 74 ntBASIC1.53□□□□□ -2.16
Usp39Q3TIX9 Gm24902-201ENSMUST00000158126 123 ntBASIC1.53□□□□□ -2.16
Usp39Q3TIX9 Gm26358-201ENSMUST00000158215 97 ntBASIC1.53□□□□□ -2.16
Usp39Q3TIX9 Gm22944-201ENSMUST00000158662 133 ntBASIC1.53□□□□□ -2.16
Usp39Q3TIX9 Gm24223-201ENSMUST00000158827 90 ntBASIC1.53□□□□□ -2.16
Usp39Q3TIX9 Mir3061-201ENSMUST00000175129 91 ntBASIC1.53□□□□□ -2.16
Usp39Q3TIX9 Gm27639-201ENSMUST00000184937 85 ntBASIC1.53□□□□□ -2.16
Usp39Q3TIX9 Gm20118-201ENSMUST00000187207 162 ntBASIC1.53□□□□□ -2.16
Usp39Q3TIX9 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.53□□□□□ -2.16
Usp39Q3TIX9 Gm22540-201ENSMUST00000158168 117 ntBASIC1.52□□□□□ -2.17
Usp39Q3TIX9 Gm22140-201ENSMUST00000158745 120 ntBASIC1.52□□□□□ -2.17
Usp39Q3TIX9 Gm25730-201ENSMUST00000178753 165 ntBASIC1.52□□□□□ -2.17
Usp39Q3TIX9 Gm27517-201ENSMUST00000184347 236 ntBASIC1.52□□□□□ -2.17
Usp39Q3TIX9 Gm44384-201ENSMUST00000200208 114 ntBASIC1.52□□□□□ -2.17
Usp39Q3TIX9 Gm25061-201ENSMUST00000104665 107 ntBASIC1.51□□□□□ -2.17
Usp39Q3TIX9 Gm24674-201ENSMUST00000179194 104 ntBASIC1.51□□□□□ -2.17
Usp39Q3TIX9 Gm27365-201ENSMUST00000184041 177 ntBASIC1.51□□□□□ -2.17
Usp39Q3TIX9 Gm27975-201ENSMUST00000184400 101 ntBASIC1.51□□□□□ -2.17
Usp39Q3TIX9 Gm28794-201ENSMUST00000185276 136 ntBASIC1.51□□□□□ -2.17
Usp39Q3TIX9 Mir1191-201ENSMUST00000116883 120 ntBASIC1.5□□□□□ -2.17
Usp39Q3TIX9 Gm27415-201ENSMUST00000183720 95 ntBASIC1.5□□□□□ -2.17
Usp39Q3TIX9 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.5□□□□□ -2.17
Usp39Q3TIX9 AC122769.2-201ENSMUST00000227248 302 ntBASIC1.5□□□□□ -2.17
Usp39Q3TIX9 Gm24379-201ENSMUST00000122695 86 ntBASIC1.49□□□□□ -2.17
Usp39Q3TIX9 Mir1899-201ENSMUST00000122798 96 ntBASIC1.49□□□□□ -2.17
Usp39Q3TIX9 Gm25014-201ENSMUST00000158401 103 ntBASIC1.49□□□□□ -2.17
Usp39Q3TIX9 Gm22887-201ENSMUST00000178586 107 ntBASIC1.49□□□□□ -2.17
Usp39Q3TIX9 Gm24805-201ENSMUST00000082931 104 ntBASIC1.49□□□□□ -2.17
Usp39Q3TIX9 Gm26062-201ENSMUST00000083379 107 ntBASIC1.49□□□□□ -2.17
Usp39Q3TIX9 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Usp39Q3TIX9 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC1.48□□□□□ -2.17
Usp39Q3TIX9 Gm14884-201ENSMUST00000120456 196 ntBASIC1.48□□□□□ -2.17
Usp39Q3TIX9 Gm15115-201ENSMUST00000121145 264 ntBASIC1.48□□□□□ -2.17
Usp39Q3TIX9 Mir1950-201ENSMUST00000158526 74 ntBASIC1.48□□□□□ -2.17
Usp39Q3TIX9 Gm25831-201ENSMUST00000158924 163 ntBASIC1.48□□□□□ -2.17
Usp39Q3TIX9 Gm22802-201ENSMUST00000175621 89 ntBASIC1.48□□□□□ -2.17
Usp39Q3TIX9 Gm45197-201ENSMUST00000205288 151 ntBASIC1.48□□□□□ -2.17
Usp39Q3TIX9 Gm22458-201ENSMUST00000082576 107 ntBASIC1.48□□□□□ -2.17
Usp39Q3TIX9 Gm23100-201ENSMUST00000083455 141 ntBASIC1.48□□□□□ -2.17
Usp39Q3TIX9 Gm23060-201ENSMUST00000102345 109 ntBASIC1.47□□□□□ -2.17
Usp39Q3TIX9 Gm26082-201ENSMUST00000104070 127 ntBASIC1.47□□□□□ -2.17
Usp39Q3TIX9 Gm23482-201ENSMUST00000104172 122 ntBASIC1.47□□□□□ -2.17
Usp39Q3TIX9 Gm22205-201ENSMUST00000122655 71 ntBASIC1.47□□□□□ -2.17
Usp39Q3TIX9 Gm22067-201ENSMUST00000122790 107 ntBASIC1.47□□□□□ -2.17
Usp39Q3TIX9 Gm24262-201ENSMUST00000157431 144 ntBASIC1.47□□□□□ -2.17
Usp39Q3TIX9 Gm28767-201ENSMUST00000188601 114 ntBASIC1.47□□□□□ -2.17
Usp39Q3TIX9 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC1.47□□□□□ -2.17
Usp39Q3TIX9 Gm43911-201ENSMUST00000203097 76 ntBASIC1.47□□□□□ -2.17
Usp39Q3TIX9 Gm23293-201ENSMUST00000082552 104 ntBASIC1.47□□□□□ -2.17
Usp39Q3TIX9 Mir34c-201ENSMUST00000083653 77 ntBASIC1.47□□□□□ -2.17
Usp39Q3TIX9 Mir1187-201ENSMUST00000116936 122 ntBASIC1.46□□□□□ -2.18
Usp39Q3TIX9 Gm11694-201ENSMUST00000118637 159 ntBASIC1.46□□□□□ -2.18
Usp39Q3TIX9 Gm22082-201ENSMUST00000157587 161 ntBASIC1.46□□□□□ -2.18
Usp39Q3TIX9 Gm25740-201ENSMUST00000180247 107 ntBASIC1.46□□□□□ -2.18
Usp39Q3TIX9 Gm27686-201ENSMUST00000185123 91 ntBASIC1.46□□□□□ -2.18
Usp39Q3TIX9 Gm18433-201ENSMUST00000192747 197 ntBASIC1.46□□□□□ -2.18
Usp39Q3TIX9 Gm44602-201ENSMUST00000205948 132 ntBASIC1.46□□□□□ -2.18
Usp39Q3TIX9 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Usp39Q3TIX9 Mir544-201ENSMUST00000103813 78 ntBASIC1.45□□□□□ -2.18
Usp39Q3TIX9 Gm23900-201ENSMUST00000157569 108 ntBASIC1.45□□□□□ -2.18
Usp39Q3TIX9 Gm22914-201ENSMUST00000175195 77 ntBASIC1.45□□□□□ -2.18
Usp39Q3TIX9 Mir6962-201ENSMUST00000199512 63 ntBASIC1.45□□□□□ -2.18
Usp39Q3TIX9 Gm44962-201ENSMUST00000206460 279 ntBASIC1.45□□□□□ -2.18
Usp39Q3TIX9 Gm23056-201ENSMUST00000082803 111 ntBASIC1.45□□□□□ -2.18
Usp39Q3TIX9 Mir223-201ENSMUST00000102112 110 ntBASIC1.44□□□□□ -2.18
Usp39Q3TIX9 Gm25992-201ENSMUST00000102437 109 ntBASIC1.44□□□□□ -2.18
Usp39Q3TIX9 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.44□□□□□ -2.18
Usp39Q3TIX9 Gm25423-201ENSMUST00000157609 107 ntBASIC1.44□□□□□ -2.18
Usp39Q3TIX9 Gm22732-201ENSMUST00000158093 121 ntBASIC1.44□□□□□ -2.18
Usp39Q3TIX9 Gm24728-201ENSMUST00000158226 125 ntBASIC1.44□□□□□ -2.18
Usp39Q3TIX9 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC1.44□□□□□ -2.18
Usp39Q3TIX9 Gm25035-201ENSMUST00000175414 77 ntBASIC1.44□□□□□ -2.18
Usp39Q3TIX9 Mir6240-201ENSMUST00000184281 117 ntBASIC1.44□□□□□ -2.18
Usp39Q3TIX9 Mir7665-201ENSMUST00000184907 63 ntBASIC1.44□□□□□ -2.18
Usp39Q3TIX9 Gm24162-201ENSMUST00000093665 102 ntBASIC1.44□□□□□ -2.18
Usp39Q3TIX9 Gm22544-201ENSMUST00000104349 127 ntBASIC1.43□□□□□ -2.18
Usp39Q3TIX9 Gm24384-201ENSMUST00000122693 75 ntBASIC1.43□□□□□ -2.18
Usp39Q3TIX9 Gm24895-201ENSMUST00000122742 74 ntBASIC1.43□□□□□ -2.18
Usp39Q3TIX9 Gm23106-201ENSMUST00000157554 101 ntBASIC1.43□□□□□ -2.18
Usp39Q3TIX9 Gm22522-201ENSMUST00000158271 151 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 151.6 ms