Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
Col8a1Q00780 Gm22494-201ENSMUST00000104495 128 ntBASIC1.66□□□□□ -2.14
Col8a1Q00780 Mir1197-201ENSMUST00000117037 120 ntBASIC1.66□□□□□ -2.14
Col8a1Q00780 Gm25798-201ENSMUST00000082641 107 ntBASIC1.66□□□□□ -2.14
Col8a1Q00780 Gm23376-201ENSMUST00000082938 160 ntBASIC1.66□□□□□ -2.14
Col8a1Q00780 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Col8a1Q00780 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Col8a1Q00780 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.14
Col8a1Q00780 Scarna9-201ENSMUST00000104318 70 ntBASIC1.65□□□□□ -2.15
Col8a1Q00780 Gm24868-201ENSMUST00000157265 136 ntBASIC1.65□□□□□ -2.15
Col8a1Q00780 Gm26133-201ENSMUST00000157363 100 ntBASIC1.65□□□□□ -2.15
Col8a1Q00780 Gm24077-201ENSMUST00000158183 136 ntBASIC1.65□□□□□ -2.15
Col8a1Q00780 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC1.65□□□□□ -2.15
Col8a1Q00780 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
Col8a1Q00780 Snord43-201ENSMUST00000199549 108 ntBASIC1.65□□□□□ -2.15
Col8a1Q00780 Mir532-201ENSMUST00000093630 96 ntBASIC1.65□□□□□ -2.15
Col8a1Q00780 Gm22673-201ENSMUST00000104415 131 ntBASIC1.64□□□□□ -2.15
Col8a1Q00780 Mir1191-201ENSMUST00000116883 120 ntBASIC1.64□□□□□ -2.15
Col8a1Q00780 Gm21885-201ENSMUST00000178891 327 ntBASIC1.64□□□□□ -2.15
Col8a1Q00780 Gm28794-201ENSMUST00000185276 136 ntBASIC1.64□□□□□ -2.15
Col8a1Q00780 Gm20305-201ENSMUST00000193226 177 ntBASIC1.64□□□□□ -2.15
Col8a1Q00780 Mir151-201ENSMUST00000083678 68 ntBASIC1.64□□□□□ -2.15
Col8a1Q00780 Snora69-201ENSMUST00000083708 131 ntBASIC1.64□□□□□ -2.15
Col8a1Q00780 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Col8a1Q00780 Gm22761-201ENSMUST00000102278 96 ntBASIC1.63□□□□□ -2.15
Col8a1Q00780 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
Col8a1Q00780 Gm26358-201ENSMUST00000158215 97 ntBASIC1.63□□□□□ -2.15
Col8a1Q00780 Gm23813-201ENSMUST00000175153 77 ntBASIC1.63□□□□□ -2.15
Col8a1Q00780 Mir3968-201ENSMUST00000175355 100 ntBASIC1.63□□□□□ -2.15
Col8a1Q00780 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.63□□□□□ -2.15
Col8a1Q00780 Gm5900-201ENSMUST00000179862 375 ntBASIC1.63□□□□□ -2.15
Col8a1Q00780 Mir7683-201ENSMUST00000183842 61 ntBASIC1.63□□□□□ -2.15
Col8a1Q00780 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC1.63□□□□□ -2.15
Col8a1Q00780 Gm45197-201ENSMUST00000205288 151 ntBASIC1.63□□□□□ -2.15
Col8a1Q00780 Gm24918-201ENSMUST00000083022 130 ntBASIC1.63□□□□□ -2.15
Col8a1Q00780 Gm23570-201ENSMUST00000083029 104 ntBASIC1.63□□□□□ -2.15
Col8a1Q00780 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
Col8a1Q00780 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
Col8a1Q00780 Gm25496-201ENSMUST00000104430 120 ntBASIC1.62□□□□□ -2.15
Col8a1Q00780 Mir1949-201ENSMUST00000157434 141 ntBASIC1.62□□□□□ -2.15
Col8a1Q00780 Gm25831-201ENSMUST00000158924 163 ntBASIC1.62□□□□□ -2.15
Col8a1Q00780 Gm28767-201ENSMUST00000188601 114 ntBASIC1.62□□□□□ -2.15
Col8a1Q00780 Gm43038-201ENSMUST00000202359 88 ntBASIC1.62□□□□□ -2.15
Col8a1Q00780 AC122769.2-201ENSMUST00000227248 302 ntBASIC1.62□□□□□ -2.15
Col8a1Q00780 Gm26082-201ENSMUST00000104070 127 ntBASIC1.61□□□□□ -2.15
Col8a1Q00780 Gm25368-201ENSMUST00000158847 131 ntBASIC1.61□□□□□ -2.15
Col8a1Q00780 Mir5104-201ENSMUST00000175319 94 ntBASIC1.61□□□□□ -2.15
Col8a1Q00780 Gm25994-201ENSMUST00000175392 101 ntBASIC1.61□□□□□ -2.15
Col8a1Q00780 Gm22048-201ENSMUST00000104721 89 ntBASIC1.6□□□□□ -2.15
Col8a1Q00780 Gm11694-201ENSMUST00000118637 159 ntBASIC1.6□□□□□ -2.15
Col8a1Q00780 Gm12432-201ENSMUST00000119540 186 ntBASIC1.6□□□□□ -2.15
Col8a1Q00780 Gm24902-201ENSMUST00000158126 123 ntBASIC1.6□□□□□ -2.15
Col8a1Q00780 Gm23763-201ENSMUST00000158345 60 ntBASIC1.6□□□□□ -2.15
Col8a1Q00780 Gm25160-201ENSMUST00000158914 102 ntBASIC1.6□□□□□ -2.15
Col8a1Q00780 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.6□□□□□ -2.15
Col8a1Q00780 Mir7665-201ENSMUST00000184907 63 ntBASIC1.6□□□□□ -2.15
Col8a1Q00780 Mir7678-201ENSMUST00000185076 71 ntBASIC1.6□□□□□ -2.15
Col8a1Q00780 Gm25629-201ENSMUST00000084001 107 ntBASIC1.6□□□□□ -2.15
Col8a1Q00780 Gm25274-201ENSMUST00000104296 135 ntBASIC1.59□□□□□ -2.15
Col8a1Q00780 Gm23785-201ENSMUST00000116741 96 ntBASIC1.59□□□□□ -2.15
Col8a1Q00780 Gm24770-201ENSMUST00000158505 92 ntBASIC1.59□□□□□ -2.15
Col8a1Q00780 Gm23342-201ENSMUST00000158958 115 ntBASIC1.59□□□□□ -2.15
Col8a1Q00780 Mir3057-201ENSMUST00000175040 91 ntBASIC1.59□□□□□ -2.15
Col8a1Q00780 Snord87-201ENSMUST00000175437 87 ntBASIC1.59□□□□□ -2.15
Col8a1Q00780 AC157602.1-201ENSMUST00000197446 105 ntBASIC1.59□□□□□ -2.15
Col8a1Q00780 Gm43911-201ENSMUST00000203097 76 ntBASIC1.59□□□□□ -2.15
Col8a1Q00780 Gm23482-201ENSMUST00000104172 122 ntBASIC1.58□□□□□ -2.16
Col8a1Q00780 Gm24686-201ENSMUST00000157755 93 ntBASIC1.58□□□□□ -2.16
Col8a1Q00780 Gm24401-201ENSMUST00000157868 91 ntBASIC1.58□□□□□ -2.16
Col8a1Q00780 Gm22944-201ENSMUST00000158662 133 ntBASIC1.58□□□□□ -2.16
Col8a1Q00780 Mir6995-201ENSMUST00000183658 71 ntBASIC1.58□□□□□ -2.16
Col8a1Q00780 Mir7016-201ENSMUST00000184308 72 ntBASIC1.58□□□□□ -2.16
Col8a1Q00780 Gm26207-201ENSMUST00000082909 104 ntBASIC1.58□□□□□ -2.16
Col8a1Q00780 Mir448-201ENSMUST00000083516 112 ntBASIC1.58□□□□□ -2.16
Col8a1Q00780 Mir107-201ENSMUST00000083660 87 ntBASIC1.58□□□□□ -2.16
Col8a1Q00780 Mir1899-201ENSMUST00000122798 96 ntBASIC1.57□□□□□ -2.16
Col8a1Q00780 Gm24478-201ENSMUST00000157439 158 ntBASIC1.57□□□□□ -2.16
Col8a1Q00780 Gm26485-201ENSMUST00000158019 64 ntBASIC1.57□□□□□ -2.16
Col8a1Q00780 Gm22403-201ENSMUST00000174919 84 ntBASIC1.57□□□□□ -2.16
Col8a1Q00780 Gm22914-201ENSMUST00000175195 77 ntBASIC1.57□□□□□ -2.16
Col8a1Q00780 Gm23410-201ENSMUST00000179967 107 ntBASIC1.57□□□□□ -2.16
Col8a1Q00780 Mir6950-201ENSMUST00000184438 73 ntBASIC1.57□□□□□ -2.16
Col8a1Q00780 Gm28435-201ENSMUST00000185496 108 ntBASIC1.57□□□□□ -2.16
Col8a1Q00780 Gm29047-201ENSMUST00000189816 108 ntBASIC1.57□□□□□ -2.16
Col8a1Q00780 Gm44602-201ENSMUST00000205948 132 ntBASIC1.57□□□□□ -2.16
Col8a1Q00780 Gm22505-201ENSMUST00000082956 108 ntBASIC1.57□□□□□ -2.16
Col8a1Q00780 Gm22363-201ENSMUST00000083100 108 ntBASIC1.57□□□□□ -2.16
Col8a1Q00780 Gm23814-201ENSMUST00000083230 102 ntBASIC1.57□□□□□ -2.16
Col8a1Q00780 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
Col8a1Q00780 Mir3061-201ENSMUST00000175129 91 ntBASIC1.56□□□□□ -2.16
Col8a1Q00780 Gm22887-201ENSMUST00000178586 107 ntBASIC1.56□□□□□ -2.16
Col8a1Q00780 Mir7241-201ENSMUST00000184532 64 ntBASIC1.56□□□□□ -2.16
Col8a1Q00780 Gm6293-201ENSMUST00000050339 195 ntBASIC1.56□□□□□ -2.16
Col8a1Q00780 Gm23347-201ENSMUST00000083823 82 ntBASIC1.56□□□□□ -2.16
Col8a1Q00780 Gm24588-201ENSMUST00000116696 83 ntBASIC1.55□□□□□ -2.16
Col8a1Q00780 Gm11966-201ENSMUST00000119907 87 ntBASIC1.55□□□□□ -2.16
Col8a1Q00780 Gm25279-201ENSMUST00000122608 133 ntBASIC1.55□□□□□ -2.16
Col8a1Q00780 Gm15692-201ENSMUST00000152173 352 ntBASIC1.55□□□□□ -2.16
Col8a1Q00780 Gm26499-201ENSMUST00000178544 79 ntBASIC1.55□□□□□ -2.16
Col8a1Q00780 Gm26096-201ENSMUST00000179084 79 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 87.9 ms