Protein–RNA interactions for Protein: P97812

Ihh, Indian hedgehog protein, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IhhP97812 Gm23947-201ENSMUST00000093636 107 ntBASIC0.25□□□□□ -2.37
IhhP97812 Gm12469-201ENSMUST00000117623 207 ntBASIC0.24□□□□□ -2.37
IhhP97812 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC0.24□□□□□ -2.37
IhhP97812 Gm23253-201ENSMUST00000157441 104 ntBASIC0.24□□□□□ -2.37
IhhP97812 Mir7010-201ENSMUST00000183464 63 ntBASIC0.24□□□□□ -2.37
IhhP97812 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.24□□□□□ -2.37
IhhP97812 Gm23509-201ENSMUST00000083080 160 ntBASIC0.24□□□□□ -2.37
IhhP97812 Mir20b-201ENSMUST00000102087 80 ntBASIC0.23□□□□□ -2.37
IhhP97812 Gm37330-201ENSMUST00000192606 153 ntBASIC0.23□□□□□ -2.37
IhhP97812 Gm44457-201ENSMUST00000198109 76 ntBASIC0.23□□□□□ -2.37
IhhP97812 Gm44469-201ENSMUST00000198558 79 ntBASIC0.23□□□□□ -2.37
IhhP97812 Gm3702-201ENSMUST00000211754 346 ntBASIC0.23□□□□□ -2.37
IhhP97812 Gm23301-201ENSMUST00000082713 65 ntBASIC0.23□□□□□ -2.37
IhhP97812 Mir467g-201ENSMUST00000116906 120 ntBASIC0.22□□□□□ -2.37
IhhP97812 Gm26290-201ENSMUST00000158891 145 ntBASIC0.22□□□□□ -2.37
IhhP97812 Gm22239-201ENSMUST00000175220 103 ntBASIC0.22□□□□□ -2.37
IhhP97812 Gm25693-201ENSMUST00000175443 85 ntBASIC0.22□□□□□ -2.37
IhhP97812 Gm27475-201ENSMUST00000183420 61 ntBASIC0.22□□□□□ -2.37
IhhP97812 Mir7065-201ENSMUST00000185110 61 ntBASIC0.22□□□□□ -2.37
IhhP97812 Mir7229-201ENSMUST00000197062 53 ntBASIC0.22□□□□□ -2.37
IhhP97812 Gm44455-201ENSMUST00000200061 82 ntBASIC0.22□□□□□ -2.37
IhhP97812 Gm25797-201ENSMUST00000082640 107 ntBASIC0.22□□□□□ -2.37
IhhP97812 Gm22030-201ENSMUST00000116942 63 ntBASIC0.21□□□□□ -2.38
IhhP97812 Gm29535-201ENSMUST00000185723 109 ntBASIC0.21□□□□□ -2.38
IhhP97812 Gm28143-201ENSMUST00000191082 109 ntBASIC0.21□□□□□ -2.38
IhhP97812 Gm24461-201ENSMUST00000082735 103 ntBASIC0.21□□□□□ -2.38
IhhP97812 Gm24290-201ENSMUST00000157634 96 ntBASIC0.2□□□□□ -2.38
IhhP97812 Scarna8-201ENSMUST00000158333 131 ntBASIC0.2□□□□□ -2.38
IhhP97812 Gm25600-201ENSMUST00000158357 106 ntBASIC0.2□□□□□ -2.38
IhhP97812 Mir1966-201ENSMUST00000158807 108 ntBASIC0.2□□□□□ -2.38
IhhP97812 Gm24223-201ENSMUST00000158827 90 ntBASIC0.2□□□□□ -2.38
IhhP97812 Gm23337-201ENSMUST00000158959 118 ntBASIC0.2□□□□□ -2.38
IhhP97812 Gm24321-201ENSMUST00000175348 80 ntBASIC0.2□□□□□ -2.38
IhhP97812 Mir7116-201ENSMUST00000195956 70 ntBASIC0.2□□□□□ -2.38
IhhP97812 Gm18502-201ENSMUST00000218679 199 ntBASIC0.2□□□□□ -2.38
IhhP97812 Gm14400-201ENSMUST00000117234 2135 ntBASIC0.19□□□□□ -2.38
IhhP97812 Gm26011-201ENSMUST00000104410 104 ntBASIC0.19□□□□□ -2.38
IhhP97812 Gm24750-201ENSMUST00000157843 104 ntBASIC0.19□□□□□ -2.38
IhhP97812 Gm37545-201ENSMUST00000186512 148 ntBASIC0.19□□□□□ -2.38
IhhP97812 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC0.19□□□□□ -2.38
IhhP97812 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC0.19□□□□□ -2.38
IhhP97812 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC0.19□□□□□ -2.38
IhhP97812 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC0.19□□□□□ -2.38
IhhP97812 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC0.19□□□□□ -2.38
IhhP97812 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC0.19□□□□□ -2.38
IhhP97812 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC0.19□□□□□ -2.38
IhhP97812 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC0.19□□□□□ -2.38
IhhP97812 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC0.19□□□□□ -2.38
IhhP97812 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC0.19□□□□□ -2.38
IhhP97812 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
IhhP97812 Mir1949-202ENSMUST00000199259 70 ntBASIC0.19□□□□□ -2.38
IhhP97812 Gm22973-201ENSMUST00000083298 191 ntBASIC0.19□□□□□ -2.38
IhhP97812 Gm45265-201ENSMUST00000210852 2497 ntBASIC0.18□□□□□ -2.38
IhhP97812 Snord90-201ENSMUST00000104568 111 ntBASIC0.18□□□□□ -2.38
IhhP97812 Mir6365-201ENSMUST00000183990 101 ntBASIC0.18□□□□□ -2.38
IhhP97812 Gm44602-201ENSMUST00000205948 132 ntBASIC0.18□□□□□ -2.38
IhhP97812 AC151902.2-201ENSMUST00000226419 301 ntBASIC0.18□□□□□ -2.38
IhhP97812 Gm25943-201ENSMUST00000103791 90 ntBASIC0.17□□□□□ -2.38
IhhP97812 Mir466b-7-201ENSMUST00000103804 88 ntBASIC0.17□□□□□ -2.38
IhhP97812 Mir466b-5-201ENSMUST00000103900 88 ntBASIC0.17□□□□□ -2.38
IhhP97812 Gm24833-201ENSMUST00000116775 120 ntBASIC0.17□□□□□ -2.38
IhhP97812 Gm26091-201ENSMUST00000122704 82 ntBASIC0.17□□□□□ -2.38
IhhP97812 Gm22962-201ENSMUST00000157962 73 ntBASIC0.17□□□□□ -2.38
IhhP97812 Mir3105-201ENSMUST00000175480 85 ntBASIC0.17□□□□□ -2.38
IhhP97812 Gm24106-201ENSMUST00000175498 127 ntBASIC0.17□□□□□ -2.38
IhhP97812 Mir466b-4-201ENSMUST00000178801 90 ntBASIC0.17□□□□□ -2.38
IhhP97812 Gm25285-201ENSMUST00000178951 90 ntBASIC0.17□□□□□ -2.38
IhhP97812 Mir466b-6-201ENSMUST00000180061 90 ntBASIC0.17□□□□□ -2.38
IhhP97812 Mir466c-2-201ENSMUST00000180211 90 ntBASIC0.17□□□□□ -2.38
IhhP97812 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC0.17□□□□□ -2.38
IhhP97812 Gm22541-201ENSMUST00000158165 127 ntBASIC0.16□□□□□ -2.38
IhhP97812 Gm24129-201ENSMUST00000158537 97 ntBASIC0.16□□□□□ -2.38
IhhP97812 Gm25974-201ENSMUST00000158701 94 ntBASIC0.16□□□□□ -2.38
IhhP97812 Gm43749-201ENSMUST00000199345 352 ntBASIC0.16□□□□□ -2.38
IhhP97812 Mir200a-201ENSMUST00000083466 90 ntBASIC0.16□□□□□ -2.38
IhhP97812 Mir669b-201ENSMUST00000102172 97 ntBASIC0.15□□□□□ -2.39
IhhP97812 Gm25040-201ENSMUST00000103877 66 ntBASIC0.15□□□□□ -2.39
IhhP97812 Snord72-201ENSMUST00000104549 81 ntBASIC0.15□□□□□ -2.39
IhhP97812 Gm16186-201ENSMUST00000120132 216 ntBASIC0.15□□□□□ -2.39
IhhP97812 Gm23761-201ENSMUST00000158347 104 ntBASIC0.15□□□□□ -2.39
IhhP97812 Gm23821-201ENSMUST00000158738 106 ntBASIC0.15□□□□□ -2.39
IhhP97812 Gm23504-201ENSMUST00000158988 95 ntBASIC0.15□□□□□ -2.39
IhhP97812 Mir670-201ENSMUST00000102380 100 ntBASIC0.14□□□□□ -2.39
IhhP97812 Gm24246-201ENSMUST00000157315 132 ntBASIC0.14□□□□□ -2.39
IhhP97812 Gm44345-201ENSMUST00000199560 135 ntBASIC0.14□□□□□ -2.39
IhhP97812 Gm25899-201ENSMUST00000082672 141 ntBASIC0.14□□□□□ -2.39
IhhP97812 Snord95-201ENSMUST00000082846 68 ntBASIC0.14□□□□□ -2.39
IhhP97812 Snora75-201ENSMUST00000082903 133 ntBASIC0.14□□□□□ -2.39
IhhP97812 Mir382-201ENSMUST00000083494 76 ntBASIC0.14□□□□□ -2.39
IhhP97812 Gm24278-201ENSMUST00000104239 127 ntBASIC0.13□□□□□ -2.39
IhhP97812 Gm24233-201ENSMUST00000104317 122 ntBASIC0.13□□□□□ -2.39
IhhP97812 Gm13065-201ENSMUST00000119178 141 ntBASIC0.13□□□□□ -2.39
IhhP97812 n-R5s39-201ENSMUST00000122613 108 ntBASIC0.13□□□□□ -2.39
IhhP97812 Gm23661-201ENSMUST00000122630 87 ntBASIC0.13□□□□□ -2.39
IhhP97812 Mir3108-201ENSMUST00000175500 79 ntBASIC0.13□□□□□ -2.39
IhhP97812 Gm27977-201ENSMUST00000185159 111 ntBASIC0.13□□□□□ -2.39
IhhP97812 AC168880.2-201ENSMUST00000224488 201 ntBASIC0.13□□□□□ -2.39
IhhP97812 Gm26202-201ENSMUST00000082910 65 ntBASIC0.13□□□□□ -2.39
IhhP97812 Mir216b-201ENSMUST00000102363 86 ntBASIC0.12□□□□□ -2.39
IhhP97812 Gm25408-201ENSMUST00000104104 133 ntBASIC0.12□□□□□ -2.39
Retrieved 100 of 76,532 protein–RNA pairs in 140.2 ms