Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Gm44488-201ENSMUST00000199467 119 ntBASIC0,83□□□□□ -2,28
Ercc3P49135 Gm25378-201ENSMUST00000104333 129 ntBASIC0,82□□□□□ -2,28
Ercc3P49135 Mir1191-201ENSMUST00000116883 120 ntBASIC0,82□□□□□ -2,28
Ercc3P49135 Gm24500-201ENSMUST00000158447 124 ntBASIC0,82□□□□□ -2,28
Ercc3P49135 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC0,82□□□□□ -2,28
Ercc3P49135 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC0,81□□□□□ -2,28
Ercc3P49135 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC0,81□□□□□ -2,28
Ercc3P49135 Scarna3a-201ENSMUST00000158911 140 ntBASIC0,81□□□□□ -2,28
Ercc3P49135 Gm10548-202ENSMUST00000165672 272 ntBASIC0,81□□□□□ -2,28
Ercc3P49135 AC159093.2-201ENSMUST00000227881 297 ntBASIC0,81□□□□□ -2,28
Ercc3P49135 Gm26168-201ENSMUST00000083787 112 ntBASIC0,81□□□□□ -2,28
Ercc3P49135 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC0,8□□□□□ -2,28
Ercc3P49135 Gm8034-201ENSMUST00000178853 132 ntBASIC0,8□□□□□ -2,28
Ercc3P49135 Gm27993-201ENSMUST00000184362 85 ntBASIC0,8□□□□□ -2,28
Ercc3P49135 Gm23321-201ENSMUST00000104465 126 ntBASIC0,79□□□□□ -2,28
Ercc3P49135 Gm25787-201ENSMUST00000104709 92 ntBASIC0,79□□□□□ -2,28
Ercc3P49135 Gm24913-201ENSMUST00000157286 107 ntBASIC0,79□□□□□ -2,28
Ercc3P49135 Gm24223-201ENSMUST00000158827 90 ntBASIC0,79□□□□□ -2,28
Ercc3P49135 Gm22708-201ENSMUST00000158987 103 ntBASIC0,79□□□□□ -2,28
Ercc3P49135 Gm38298-201ENSMUST00000193578 118 ntBASIC0,79□□□□□ -2,28
Ercc3P49135 Mir219b-201ENSMUST00000198317 65 ntBASIC0,79□□□□□ -2,28
Ercc3P49135 Gm44469-201ENSMUST00000198558 79 ntBASIC0,79□□□□□ -2,28
Ercc3P49135 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC0,79□□□□□ -2,28
Ercc3P49135 AC147101.2-201ENSMUST00000219756 184 ntBASIC0,79□□□□□ -2,28
Ercc3P49135 AC126939.1-201ENSMUST00000224943 226 ntBASIC0,79□□□□□ -2,28
Ercc3P49135 AC116319.1-201ENSMUST00000227765 222 ntBASIC0,79□□□□□ -2,28
Ercc3P49135 mt-Ts2-201ENSMUST00000082416 59 ntBASIC0,79□□□□□ -2,28
Ercc3P49135 Gm12469-201ENSMUST00000117623 207 ntBASIC0,78□□□□□ -2,28
Ercc3P49135 Gm24842-201ENSMUST00000158681 54 ntBASIC0,78□□□□□ -2,28
Ercc3P49135 Snord64-201ENSMUST00000104003 67 ntBASIC0,77□□□□□ -2,29
Ercc3P49135 Gm23126-201ENSMUST00000104260 134 ntBASIC0,77□□□□□ -2,29
Ercc3P49135 n-R5s39-201ENSMUST00000122613 108 ntBASIC0,77□□□□□ -2,29
Ercc3P49135 Gm23857-201ENSMUST00000158379 111 ntBASIC0,77□□□□□ -2,29
Ercc3P49135 Gm24676-201ENSMUST00000158758 75 ntBASIC0,77□□□□□ -2,29
Ercc3P49135 Gm23917-201ENSMUST00000175256 98 ntBASIC0,77□□□□□ -2,29
Ercc3P49135 Gm26398-201ENSMUST00000179015 127 ntBASIC0,77□□□□□ -2,29
Ercc3P49135 Gm27851-201ENSMUST00000183529 63 ntBASIC0,77□□□□□ -2,29
Ercc3P49135 Gm37330-201ENSMUST00000192606 153 ntBASIC0,77□□□□□ -2,29
Ercc3P49135 AC124196.2-201ENSMUST00000224835 145 ntBASIC0,77□□□□□ -2,29
Ercc3P49135 n-R5s6-201ENSMUST00000122663 88 ntBASIC0,76□□□□□ -2,29
Ercc3P49135 Gm25425-201ENSMUST00000157611 96 ntBASIC0,76□□□□□ -2,29
Ercc3P49135 Gm26290-201ENSMUST00000158891 145 ntBASIC0,76□□□□□ -2,29
Ercc3P49135 Gm26158-201ENSMUST00000158973 119 ntBASIC0,76□□□□□ -2,29
Ercc3P49135 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0,76□□□□□ -2,29
Ercc3P49135 Gm27289-201ENSMUST00000183341 82 ntBASIC0,76□□□□□ -2,29
Ercc3P49135 Mir216a-201ENSMUST00000083605 72 ntBASIC0,76□□□□□ -2,29
Ercc3P49135 Gm23989-201ENSMUST00000117030 66 ntBASIC0,75□□□□□ -2,29
Ercc3P49135 Gm12013-201ENSMUST00000121971 155 ntBASIC0,75□□□□□ -2,29
Ercc3P49135 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC0,75□□□□□ -2,29
Ercc3P49135 Gm25428-201ENSMUST00000157608 114 ntBASIC0,75□□□□□ -2,29
Ercc3P49135 Gm23783-201ENSMUST00000157941 102 ntBASIC0,75□□□□□ -2,29
Ercc3P49135 Mir7079-201ENSMUST00000184697 69 ntBASIC0,75□□□□□ -2,29
Ercc3P49135 Mir21c-201ENSMUST00000184910 78 ntBASIC0,75□□□□□ -2,29
Ercc3P49135 Gm23301-201ENSMUST00000082713 65 ntBASIC0,75□□□□□ -2,29
Ercc3P49135 Gm23605-201ENSMUST00000157255 127 ntBASIC0,74□□□□□ -2,29
Ercc3P49135 AC158982.2-201ENSMUST00000226283 184 ntBASIC0,74□□□□□ -2,29
Ercc3P49135 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC0,73□□□□□ -2,29
Ercc3P49135 Gm25680-201ENSMUST00000116917 126 ntBASIC0,73□□□□□ -2,29
Ercc3P49135 Gm22635-201ENSMUST00000116962 126 ntBASIC0,73□□□□□ -2,29
Ercc3P49135 Gm26236-201ENSMUST00000175536 137 ntBASIC0,73□□□□□ -2,29
Ercc3P49135 AC113441.1-201ENSMUST00000223464 134 ntBASIC0,73□□□□□ -2,29
Ercc3P49135 mt-Tt-201ENSMUST00000082422 67 ntBASIC0,73□□□□□ -2,29
Ercc3P49135 Gm26454-201ENSMUST00000082682 107 ntBASIC0,73□□□□□ -2,29
Ercc3P49135 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC0,72□□□□□ -2,29
Ercc3P49135 Gm16265-201ENSMUST00000134558 108 ntBASIC0,72□□□□□ -2,29
Ercc3P49135 Mir100-201ENSMUST00000175270 80 ntBASIC0,72□□□□□ -2,29
Ercc3P49135 Mir3070a-201ENSMUST00000175468 89 ntBASIC0,72□□□□□ -2,29
Ercc3P49135 Mir377-201ENSMUST00000083504 68 ntBASIC0,72□□□□□ -2,29
Ercc3P49135 Gm14884-201ENSMUST00000120456 196 ntBASIC0,71□□□□□ -2,3
Ercc3P49135 Gm6985-201ENSMUST00000121255 271 ntBASIC0,71□□□□□ -2,3
Ercc3P49135 Gm24649-201ENSMUST00000157106 134 ntBASIC0,71□□□□□ -2,3
Ercc3P49135 Gm22522-201ENSMUST00000158271 151 ntBASIC0,71□□□□□ -2,3
Ercc3P49135 Gm22431-201ENSMUST00000158545 107 ntBASIC0,71□□□□□ -2,3
Ercc3P49135 Gm26498-201ENSMUST00000177799 79 ntBASIC0,71□□□□□ -2,3
Ercc3P49135 Gm26230-201ENSMUST00000180141 79 ntBASIC0,71□□□□□ -2,3
Ercc3P49135 n-R5s96-201ENSMUST00000082574 124 ntBASIC0,71□□□□□ -2,3
Ercc3P49135 Gm25006-201ENSMUST00000083813 107 ntBASIC0,71□□□□□ -2,3
Ercc3P49135 Gm22196-201ENSMUST00000116865 109 ntBASIC0,7□□□□□ -2,3
Ercc3P49135 Gm22558-201ENSMUST00000157326 95 ntBASIC0,7□□□□□ -2,3
Ercc3P49135 Gm24129-201ENSMUST00000158537 97 ntBASIC0,7□□□□□ -2,3
Ercc3P49135 Gm23966-201ENSMUST00000179823 107 ntBASIC0,7□□□□□ -2,3
Ercc3P49135 Gm22772-201ENSMUST00000104451 121 ntBASIC0,69□□□□□ -2,3
Ercc3P49135 Gm26484-201ENSMUST00000158018 106 ntBASIC0,69□□□□□ -2,3
Ercc3P49135 Gm25600-201ENSMUST00000158357 106 ntBASIC0,69□□□□□ -2,3
Ercc3P49135 Gm25693-201ENSMUST00000175443 85 ntBASIC0,69□□□□□ -2,3
Ercc3P49135 Gm26285-201ENSMUST00000177923 107 ntBASIC0,69□□□□□ -2,3
Ercc3P49135 AC124687.1-201ENSMUST00000221868 189 ntBASIC0,69□□□□□ -2,3
Ercc3P49135 Gm23622-201ENSMUST00000082460 107 ntBASIC0,69□□□□□ -2,3
Ercc3P49135 Gm24258-201ENSMUST00000083739 133 ntBASIC0,69□□□□□ -2,3
Ercc3P49135 Gm22030-201ENSMUST00000116942 63 ntBASIC0,68□□□□□ -2,3
Ercc3P49135 Gm24167-201ENSMUST00000177733 124 ntBASIC0,68□□□□□ -2,3
Ercc3P49135 Gm24028-201ENSMUST00000178991 124 ntBASIC0,68□□□□□ -2,3
Ercc3P49135 Gm22638-201ENSMUST00000179674 107 ntBASIC0,68□□□□□ -2,3
Ercc3P49135 AC211878.4-201ENSMUST00000220970 262 ntBASIC0,68□□□□□ -2,3
Ercc3P49135 Gm24290-201ENSMUST00000157634 96 ntBASIC0,67□□□□□ -2,3
Ercc3P49135 Gm23044-201ENSMUST00000157891 100 ntBASIC0,66□□□□□ -2,3
Ercc3P49135 Gm22541-201ENSMUST00000158165 127 ntBASIC0,66□□□□□ -2,3
Ercc3P49135 Mir7010-201ENSMUST00000183464 63 ntBASIC0,66□□□□□ -2,3
Ercc3P49135 Gm43432-201ENSMUST00000196352 121 ntBASIC0,66□□□□□ -2,3
Ercc3P49135 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC0,66□□□□□ -2,3
Retrieved 100 of 76,532 protein–RNA pairs in 105,4 ms