Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Gm23278-201ENSMUST00000157911 143 ntBASIC0.11□□□□□ -2.39
Cd40lgP27548 Gm23761-201ENSMUST00000158347 104 ntBASIC0.11□□□□□ -2.39
Cd40lgP27548 Gm25952-201ENSMUST00000175329 74 ntBASIC0.11□□□□□ -2.39
Cd40lgP27548 Gm44338-201ENSMUST00000198614 110 ntBASIC0.11□□□□□ -2.39
Cd40lgP27548 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC0.1□□□□□ -2.39
Cd40lgP27548 Gm22303-201ENSMUST00000082686 122 ntBASIC0.1□□□□□ -2.39
Cd40lgP27548 Snora75-201ENSMUST00000082903 133 ntBASIC0.1□□□□□ -2.39
Cd40lgP27548 Gm24233-201ENSMUST00000104317 122 ntBASIC0.09□□□□□ -2.4
Cd40lgP27548 Gm25653-201ENSMUST00000158473 138 ntBASIC0.09□□□□□ -2.4
Cd40lgP27548 Gm22139-201ENSMUST00000158747 105 ntBASIC0.09□□□□□ -2.4
Cd40lgP27548 Mir1966-201ENSMUST00000158807 108 ntBASIC0.09□□□□□ -2.4
Cd40lgP27548 Mir466b-1-201ENSMUST00000177988 82 ntBASIC0.09□□□□□ -2.4
Cd40lgP27548 Gm37746-201ENSMUST00000193249 198 ntBASIC0.09□□□□□ -2.4
Cd40lgP27548 Gm23509-201ENSMUST00000083080 160 ntBASIC0.09□□□□□ -2.4
Cd40lgP27548 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC0.09□□□□□ -2.4
Cd40lgP27548 Gm25565-201ENSMUST00000104605 105 ntBASIC0.08□□□□□ -2.4
Cd40lgP27548 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC0.08□□□□□ -2.4
Cd40lgP27548 Gm23337-201ENSMUST00000158959 118 ntBASIC0.08□□□□□ -2.4
Cd40lgP27548 Gm28001-201ENSMUST00000183561 117 ntBASIC0.08□□□□□ -2.4
Cd40lgP27548 Mir8107-201ENSMUST00000184024 117 ntBASIC0.08□□□□□ -2.4
Cd40lgP27548 Gm22652-201ENSMUST00000083207 131 ntBASIC0.08□□□□□ -2.4
Cd40lgP27548 Gm25629-201ENSMUST00000084001 107 ntBASIC0.08□□□□□ -2.4
Cd40lgP27548 Gm26468-201ENSMUST00000158644 106 ntBASIC0.07□□□□□ -2.4
Cd40lgP27548 Gm25974-201ENSMUST00000158701 94 ntBASIC0.07□□□□□ -2.4
Cd40lgP27548 Gm37545-201ENSMUST00000186512 148 ntBASIC0.07□□□□□ -2.4
Cd40lgP27548 Gm26202-201ENSMUST00000082910 65 ntBASIC0.07□□□□□ -2.4
Cd40lgP27548 Gm26421-201ENSMUST00000104279 132 ntBASIC0.06□□□□□ -2.4
Cd40lgP27548 Gm24131-201ENSMUST00000158539 107 ntBASIC0.06□□□□□ -2.4
Cd40lgP27548 Gm24054-201ENSMUST00000158619 105 ntBASIC0.06□□□□□ -2.4
Cd40lgP27548 Gm23209-201ENSMUST00000158667 110 ntBASIC0.06□□□□□ -2.4
Cd40lgP27548 Gm23821-201ENSMUST00000158738 106 ntBASIC0.06□□□□□ -2.4
Cd40lgP27548 Gm45197-201ENSMUST00000205288 151 ntBASIC0.06□□□□□ -2.4
Cd40lgP27548 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC0.06□□□□□ -2.4
Cd40lgP27548 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC0.06□□□□□ -2.4
Cd40lgP27548 Gm23445-201ENSMUST00000082800 107 ntBASIC0.06□□□□□ -2.4
Cd40lgP27548 Snord95-201ENSMUST00000082846 68 ntBASIC0.06□□□□□ -2.4
Cd40lgP27548 Gm24457-201ENSMUST00000083196 105 ntBASIC0.06□□□□□ -2.4
Cd40lgP27548 Gm25136-201ENSMUST00000083253 115 ntBASIC0.06□□□□□ -2.4
Cd40lgP27548 Gm22373-201ENSMUST00000104584 89 ntBASIC0.05□□□□□ -2.4
Cd40lgP27548 Mir466h-201ENSMUST00000104748 81 ntBASIC0.05□□□□□ -2.4
Cd40lgP27548 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC0.05□□□□□ -2.4
Cd40lgP27548 Gm23253-201ENSMUST00000157441 104 ntBASIC0.05□□□□□ -2.4
Cd40lgP27548 Gm24467-201ENSMUST00000157887 126 ntBASIC0.05□□□□□ -2.4
Cd40lgP27548 Mir3473d-201ENSMUST00000175346 81 ntBASIC0.05□□□□□ -2.4
Cd40lgP27548 Gm44353-201ENSMUST00000200618 138 ntBASIC0.05□□□□□ -2.4
Cd40lgP27548 Snord90-201ENSMUST00000104568 111 ntBASIC0.04□□□□□ -2.4
Cd40lgP27548 Gm24590-201ENSMUST00000116699 119 ntBASIC0.04□□□□□ -2.4
Cd40lgP27548 Mir3089-201ENSMUST00000175350 84 ntBASIC0.04□□□□□ -2.4
Cd40lgP27548 Gm44853-201ENSMUST00000209070 250 ntBASIC0.04□□□□□ -2.4
Cd40lgP27548 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC0.04□□□□□ -2.4
Cd40lgP27548 Gm25497-201ENSMUST00000104425 132 ntBASIC0.03□□□□□ -2.4
Cd40lgP27548 Gm23852-201ENSMUST00000158376 77 ntBASIC0.03□□□□□ -2.4
Cd40lgP27548 Gm25716-201ENSMUST00000158628 104 ntBASIC0.03□□□□□ -2.4
Cd40lgP27548 Mir1a-1-201ENSMUST00000093635 77 ntBASIC0.03□□□□□ -2.4
Cd40lgP27548 Gm23947-201ENSMUST00000093636 107 ntBASIC0.03□□□□□ -2.4
Cd40lgP27548 Gm22048-201ENSMUST00000104721 89 ntBASIC0.02□□□□□ -2.41
Cd40lgP27548 Gm25599-201ENSMUST00000157816 103 ntBASIC0.02□□□□□ -2.41
Cd40lgP27548 Gm22699-201ENSMUST00000175376 105 ntBASIC0.02□□□□□ -2.41
Cd40lgP27548 Gm22621-201ENSMUST00000179678 74 ntBASIC0.02□□□□□ -2.41
Cd40lgP27548 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC0.02□□□□□ -2.41
Cd40lgP27548 Gm22368-201ENSMUST00000102416 109 ntBASIC0.01□□□□□ -2.41
Cd40lgP27548 Gm22337-201ENSMUST00000157721 132 ntBASIC0.01□□□□□ -2.41
Cd40lgP27548 Gm25885-201ENSMUST00000157779 109 ntBASIC0.01□□□□□ -2.41
Cd40lgP27548 Traj61-201ENSMUST00000165025 72 ntBASIC0.01□□□□□ -2.41
Cd40lgP27548 Gm27297-201ENSMUST00000183395 105 ntBASIC0.01□□□□□ -2.41
Cd40lgP27548 Gm44345-201ENSMUST00000199560 135 ntBASIC0.01□□□□□ -2.41
Cd40lgP27548 Gm25797-201ENSMUST00000082640 107 ntBASIC0.01□□□□□ -2.41
Cd40lgP27548 Snord47-201ENSMUST00000083034 77 ntBASIC0.01□□□□□ -2.41
Cd40lgP27548 Mir18-201ENSMUST00000083469 96 ntBASIC0.01□□□□□ -2.41
Cd40lgP27548 Gm23504-201ENSMUST00000158988 95 ntBASIC0□□□□□ -2.41
Cd40lgP27548 Gm43927-201ENSMUST00000204599 117 ntBASIC0□□□□□ -2.41
Cd40lgP27548 Gm44602-201ENSMUST00000205948 132 ntBASIC0□□□□□ -2.41
Cd40lgP27548 Gm25703-201ENSMUST00000083123 151 ntBASIC0□□□□□ -2.41
Cd40lgP27548 Snord70-201ENSMUST00000104157 87 ntBASIC-0.01□□□□□ -2.41
Cd40lgP27548 Gm26011-201ENSMUST00000104410 104 ntBASIC-0.01□□□□□ -2.41
Cd40lgP27548 Gm23990-201ENSMUST00000117031 117 ntBASIC-0.01□□□□□ -2.41
Cd40lgP27548 Gm23661-201ENSMUST00000122630 87 ntBASIC-0.01□□□□□ -2.41
Cd40lgP27548 Gm24903-201ENSMUST00000158131 126 ntBASIC-0.01□□□□□ -2.41
Cd40lgP27548 Gm28270-201ENSMUST00000188550 109 ntBASIC-0.01□□□□□ -2.41
Cd40lgP27548 Gm28328-201ENSMUST00000188869 109 ntBASIC-0.01□□□□□ -2.41
Cd40lgP27548 Gm29047-201ENSMUST00000189816 108 ntBASIC-0.01□□□□□ -2.41
Cd40lgP27548 Ighv15-1-201ENSMUST00000194450 276 ntBASIC-0.01□□□□□ -2.41
Cd40lgP27548 Gm44327-201ENSMUST00000200068 117 ntBASIC-0.01□□□□□ -2.41
Cd40lgP27548 Gm44803-201ENSMUST00000204384 156 ntBASIC-0.01□□□□□ -2.41
Cd40lgP27548 Gm11694-201ENSMUST00000118637 159 ntBASIC-0.02□□□□□ -2.41
Cd40lgP27548 Gm24009-201ENSMUST00000157734 93 ntBASIC-0.02□□□□□ -2.41
Cd40lgP27548 Gm24461-201ENSMUST00000082735 103 ntBASIC-0.02□□□□□ -2.41
Cd40lgP27548 Gm25006-201ENSMUST00000083813 107 ntBASIC-0.02□□□□□ -2.41
Cd40lgP27548 Mir216b-201ENSMUST00000102363 86 ntBASIC-0.03□□□□□ -2.41
Cd40lgP27548 Gm24246-201ENSMUST00000157315 132 ntBASIC-0.03□□□□□ -2.41
Cd40lgP27548 Gm24718-201ENSMUST00000157521 136 ntBASIC-0.03□□□□□ -2.41
Cd40lgP27548 Gm23864-201ENSMUST00000177607 107 ntBASIC-0.03□□□□□ -2.41
Cd40lgP27548 Gm38208-201ENSMUST00000192476 114 ntBASIC-0.03□□□□□ -2.41
Cd40lgP27548 AC124687.1-201ENSMUST00000221868 189 ntBASIC-0.03□□□□□ -2.41
Cd40lgP27548 Gm22788-201ENSMUST00000157876 61 ntBASIC-0.04□□□□□ -2.42
Cd40lgP27548 Gm23036-201ENSMUST00000157885 99 ntBASIC-0.04□□□□□ -2.42
Cd40lgP27548 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC-0.04□□□□□ -2.42
Cd40lgP27548 Gm12013-201ENSMUST00000121971 155 ntBASIC-0.05□□□□□ -2.42
Cd40lgP27548 Gm25056-201ENSMUST00000157372 62 ntBASIC-0.05□□□□□ -2.42
Cd40lgP27548 Mir21c-201ENSMUST00000184910 78 ntBASIC-0.05□□□□□ -2.42
Retrieved 100 of 76,532 protein–RNA pairs in 204.7 ms