Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Gm24221-201ENSMUST00000158833 313 ntBASIC2.26□□□□□ -2.05
Msx1P13297 Gm22413-201ENSMUST00000175465 85 ntBASIC2.26□□□□□ -2.05
Msx1P13297 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
Msx1P13297 Gm24009-201ENSMUST00000157734 93 ntBASIC2.25□□□□□ -2.05
Msx1P13297 Gm22551-201ENSMUST00000157795 103 ntBASIC2.25□□□□□ -2.05
Msx1P13297 Gm3852-201ENSMUST00000182781 264 ntBASIC2.25□□□□□ -2.05
Msx1P13297 Gm24311-201ENSMUST00000082570 104 ntBASIC2.25□□□□□ -2.05
Msx1P13297 Gm37824-201ENSMUST00000193430 3236 ntBASIC2.25□□□□□ -2.05
Msx1P13297 Gm23950-201ENSMUST00000104026 129 ntBASIC2.24□□□□□ -2.05
Msx1P13297 Gm23980-201ENSMUST00000157135 158 ntBASIC2.24□□□□□ -2.05
Msx1P13297 Gm24900-201ENSMUST00000158128 134 ntBASIC2.24□□□□□ -2.05
Msx1P13297 Gm22517-201ENSMUST00000158265 136 ntBASIC2.24□□□□□ -2.05
Msx1P13297 Gm24129-201ENSMUST00000158537 97 ntBASIC2.24□□□□□ -2.05
Msx1P13297 Gm24547-201ENSMUST00000158649 149 ntBASIC2.24□□□□□ -2.05
Msx1P13297 Gm23005-201ENSMUST00000158950 136 ntBASIC2.24□□□□□ -2.05
Msx1P13297 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.24□□□□□ -2.05
Msx1P13297 Gm26202-201ENSMUST00000082910 65 ntBASIC2.24□□□□□ -2.05
Msx1P13297 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC2.24□□□□□ -2.05
Msx1P13297 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Msx1P13297 Gm26359-201ENSMUST00000158873 101 ntBASIC2.23□□□□□ -2.05
Msx1P13297 Gm24177-201ENSMUST00000158927 131 ntBASIC2.23□□□□□ -2.05
Msx1P13297 Gm25730-201ENSMUST00000178753 165 ntBASIC2.23□□□□□ -2.05
Msx1P13297 Gm27297-201ENSMUST00000183395 105 ntBASIC2.23□□□□□ -2.05
Msx1P13297 Mir8116-201ENSMUST00000184134 97 ntBASIC2.23□□□□□ -2.05
Msx1P13297 Gm27517-201ENSMUST00000184347 236 ntBASIC2.23□□□□□ -2.05
Msx1P13297 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
Msx1P13297 Gm25756-201ENSMUST00000103990 136 ntBASIC2.22□□□□□ -2.05
Msx1P13297 n-R5s63-201ENSMUST00000122756 103 ntBASIC2.22□□□□□ -2.05
Msx1P13297 Gm25056-201ENSMUST00000157372 62 ntBASIC2.22□□□□□ -2.05
Msx1P13297 Gm25368-201ENSMUST00000158847 131 ntBASIC2.22□□□□□ -2.05
Msx1P13297 Gm27722-201ENSMUST00000183908 76 ntBASIC2.22□□□□□ -2.05
Msx1P13297 Mir7026-201ENSMUST00000184384 67 ntBASIC2.22□□□□□ -2.05
Msx1P13297 Gm28862-201ENSMUST00000188246 163 ntBASIC2.22□□□□□ -2.05
Msx1P13297 Gm43512-201ENSMUST00000198495 176 ntBASIC2.22□□□□□ -2.05
Msx1P13297 Gm44469-201ENSMUST00000198558 79 ntBASIC2.22□□□□□ -2.05
Msx1P13297 Gm22753-201ENSMUST00000083657 107 ntBASIC2.22□□□□□ -2.05
Msx1P13297 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Msx1P13297 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Msx1P13297 Gm25094-201ENSMUST00000103992 131 ntBASIC2.21□□□□□ -2.06
Msx1P13297 Gm26158-201ENSMUST00000158973 119 ntBASIC2.21□□□□□ -2.06
Msx1P13297 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.21□□□□□ -2.06
Msx1P13297 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
Msx1P13297 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.21□□□□□ -2.06
Msx1P13297 Gm25991-201ENSMUST00000102439 99 ntBASIC2.2□□□□□ -2.06
Msx1P13297 Gm25600-201ENSMUST00000158357 106 ntBASIC2.19□□□□□ -2.06
Msx1P13297 Gm25958-201ENSMUST00000175114 71 ntBASIC2.19□□□□□ -2.06
Msx1P13297 Gm22809-201ENSMUST00000082743 156 ntBASIC2.19□□□□□ -2.06
Msx1P13297 Gm24202-201ENSMUST00000082948 103 ntBASIC2.19□□□□□ -2.06
Msx1P13297 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Msx1P13297 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Msx1P13297 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Msx1P13297 Gm25423-201ENSMUST00000157609 107 ntBASIC2.18□□□□□ -2.06
Msx1P13297 Gm23857-201ENSMUST00000158379 111 ntBASIC2.18□□□□□ -2.06
Msx1P13297 Gm25974-201ENSMUST00000158701 94 ntBASIC2.18□□□□□ -2.06
Msx1P13297 Gm10548-202ENSMUST00000165672 272 ntBASIC2.18□□□□□ -2.06
Msx1P13297 Gm24331-201ENSMUST00000175099 67 ntBASIC2.18□□□□□ -2.06
Msx1P13297 Gm23801-201ENSMUST00000175561 67 ntBASIC2.18□□□□□ -2.06
Msx1P13297 Gm24485-201ENSMUST00000178283 67 ntBASIC2.18□□□□□ -2.06
Msx1P13297 Mir497-201ENSMUST00000200557 84 ntBASIC2.18□□□□□ -2.06
Msx1P13297 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.18□□□□□ -2.06
Msx1P13297 Mir423-201ENSMUST00000083584 109 ntBASIC2.18□□□□□ -2.06
Msx1P13297 Gm25650-201ENSMUST00000083784 162 ntBASIC2.18□□□□□ -2.06
Msx1P13297 Gm15692-201ENSMUST00000152173 352 ntBASIC2.17□□□□□ -2.06
Msx1P13297 Gm26029-201ENSMUST00000158659 132 ntBASIC2.17□□□□□ -2.06
Msx1P13297 Gm24208-201ENSMUST00000082783 135 ntBASIC2.17□□□□□ -2.06
Msx1P13297 Mir222-201ENSMUST00000083537 79 ntBASIC2.17□□□□□ -2.06
Msx1P13297 Gm23106-201ENSMUST00000157554 101 ntBASIC2.16□□□□□ -2.06
Msx1P13297 Mir7021-201ENSMUST00000197026 63 ntBASIC2.16□□□□□ -2.06
Msx1P13297 AC168062.3-201ENSMUST00000227025 165 ntBASIC2.16□□□□□ -2.06
Msx1P13297 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Msx1P13297 Gm26154-201ENSMUST00000102339 96 ntBASIC2.15□□□□□ -2.07
Msx1P13297 Mir544-201ENSMUST00000103813 78 ntBASIC2.15□□□□□ -2.07
Msx1P13297 Gm25496-201ENSMUST00000104430 120 ntBASIC2.15□□□□□ -2.07
Msx1P13297 Gm23172-201ENSMUST00000157160 124 ntBASIC2.15□□□□□ -2.07
Msx1P13297 Gm24915-201ENSMUST00000157288 78 ntBASIC2.15□□□□□ -2.07
Msx1P13297 Gm23419-201ENSMUST00000175523 84 ntBASIC2.15□□□□□ -2.07
Msx1P13297 Gm43722-201ENSMUST00000196054 124 ntBASIC2.15□□□□□ -2.07
Msx1P13297 Gm44408-201ENSMUST00000200205 66 ntBASIC2.15□□□□□ -2.07
Msx1P13297 n-R5s70-201ENSMUST00000122650 116 ntBASIC2.14□□□□□ -2.07
Msx1P13297 Gm23856-201ENSMUST00000158380 99 ntBASIC2.14□□□□□ -2.07
Msx1P13297 Gm23100-201ENSMUST00000083455 141 ntBASIC2.14□□□□□ -2.07
Msx1P13297 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Msx1P13297 AC164629.4-201ENSMUST00000218505 3247 ntBASIC2.13□□□□□ -2.07
Msx1P13297 Gm43484-201ENSMUST00000198333 5966 ntBASIC2.13□□□□□ -2.07
Msx1P13297 Gm23010-201ENSMUST00000104151 126 ntBASIC2.13□□□□□ -2.07
Msx1P13297 Gm11857-201ENSMUST00000119817 324 ntBASIC2.13□□□□□ -2.07
Msx1P13297 Gm6985-201ENSMUST00000121255 271 ntBASIC2.13□□□□□ -2.07
Msx1P13297 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.13□□□□□ -2.07
Msx1P13297 Gm22947-201ENSMUST00000158559 91 ntBASIC2.13□□□□□ -2.07
Msx1P13297 Gm22929-201ENSMUST00000175517 107 ntBASIC2.13□□□□□ -2.07
Msx1P13297 Gm23291-201ENSMUST00000175611 78 ntBASIC2.13□□□□□ -2.07
Msx1P13297 Gm23289-201ENSMUST00000175615 108 ntBASIC2.13□□□□□ -2.07
Msx1P13297 Gm44948-201ENSMUST00000209050 149 ntBASIC2.13□□□□□ -2.07
Msx1P13297 Snord14a-201ENSMUST00000082807 87 ntBASIC2.13□□□□□ -2.07
Msx1P13297 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Msx1P13297 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC2.12□□□□□ -2.07
Msx1P13297 Gm24677-201ENSMUST00000158755 150 ntBASIC2.12□□□□□ -2.07
Msx1P13297 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.12□□□□□ -2.07
Msx1P13297 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC2.12□□□□□ -2.07
Msx1P13297 Gm6444-201ENSMUST00000119611 458 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 213.5 ms