Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm26398-201ENSMUST00000179015 127 ntBASIC-0.28□□□□□ -2.45
Lire1P11260 Gm6607-201ENSMUST00000215035 328 ntBASIC-0.28□□□□□ -2.45
Lire1P11260 Gm22509-201ENSMUST00000082775 107 ntBASIC-0.28□□□□□ -2.45
Lire1P11260 Gm25338-201ENSMUST00000116849 120 ntBASIC-0.29□□□□□ -2.46
Lire1P11260 Gm14502-201ENSMUST00000118154 113 ntBASIC-0.29□□□□□ -2.46
Lire1P11260 Gm43927-201ENSMUST00000204599 117 ntBASIC-0.29□□□□□ -2.46
Lire1P11260 Snord49b-201ENSMUST00000082503 72 ntBASIC-0.29□□□□□ -2.46
Lire1P11260 Gm26395-201ENSMUST00000104094 132 ntBASIC-0.3□□□□□ -2.46
Lire1P11260 n-R5s171-201ENSMUST00000104128 79 ntBASIC-0.3□□□□□ -2.46
Lire1P11260 Gm23482-201ENSMUST00000104172 122 ntBASIC-0.3□□□□□ -2.46
Lire1P11260 Gm23320-201ENSMUST00000104462 127 ntBASIC-0.3□□□□□ -2.46
Lire1P11260 Gm24132-201ENSMUST00000104745 91 ntBASIC-0.3□□□□□ -2.46
Lire1P11260 Gm23987-201ENSMUST00000117039 129 ntBASIC-0.3□□□□□ -2.46
Lire1P11260 Gm26210-201ENSMUST00000158680 91 ntBASIC-0.3□□□□□ -2.46
Lire1P11260 Gm22287-201ENSMUST00000083197 107 ntBASIC-0.3□□□□□ -2.46
Lire1P11260 Gm25629-201ENSMUST00000084001 107 ntBASIC-0.3□□□□□ -2.46
Lire1P11260 Mir487b-201ENSMUST00000102265 82 ntBASIC-0.31□□□□□ -2.46
Lire1P11260 Gm14001-201ENSMUST00000118847 247 ntBASIC-0.31□□□□□ -2.46
Lire1P11260 Gm42845-201ENSMUST00000197766 105 ntBASIC-0.31□□□□□ -2.46
Lire1P11260 Mir1a-2-201ENSMUST00000198520 72 ntBASIC-0.31□□□□□ -2.46
Lire1P11260 Gm25756-201ENSMUST00000103990 136 ntBASIC-0.32□□□□□ -2.46
Lire1P11260 Gm22607-201ENSMUST00000158291 105 ntBASIC-0.32□□□□□ -2.46
Lire1P11260 Gm27297-201ENSMUST00000183395 105 ntBASIC-0.32□□□□□ -2.46
Lire1P11260 Gm24587-201ENSMUST00000116697 89 ntBASIC-0.33□□□□□ -2.46
Lire1P11260 Gm23918-201ENSMUST00000175253 106 ntBASIC-0.33□□□□□ -2.46
Lire1P11260 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC-0.33□□□□□ -2.46
Lire1P11260 Gm25802-201ENSMUST00000082639 77 ntBASIC-0.33□□□□□ -2.46
Lire1P11260 Gm22148-201ENSMUST00000104445 107 ntBASIC-0.34□□□□□ -2.46
Lire1P11260 Gm25390-201ENSMUST00000157341 103 ntBASIC-0.34□□□□□ -2.46
Lire1P11260 Gm25834-201ENSMUST00000158916 101 ntBASIC-0.34□□□□□ -2.46
Lire1P11260 AC124739.2-201ENSMUST00000222201 109 ntBASIC-0.34□□□□□ -2.46
Lire1P11260 mt-Ta-201ENSMUST00000082398 69 ntBASIC-0.34□□□□□ -2.46
Lire1P11260 Gm23690-201ENSMUST00000083036 94 ntBASIC-0.34□□□□□ -2.46
Lire1P11260 Gm22101-201ENSMUST00000157928 103 ntBASIC-0.35□□□□□ -2.47
Lire1P11260 Gm27579-201ENSMUST00000158113 63 ntBASIC-0.35□□□□□ -2.47
Lire1P11260 Mir3094-201ENSMUST00000175121 64 ntBASIC-0.35□□□□□ -2.47
Lire1P11260 mt-Tc-201ENSMUST00000082400 66 ntBASIC-0.35□□□□□ -2.47
Lire1P11260 Mir216b-201ENSMUST00000102363 86 ntBASIC-0.36□□□□□ -2.47
Lire1P11260 Gm24232-201ENSMUST00000104314 132 ntBASIC-0.36□□□□□ -2.47
Lire1P11260 Gm24468-201ENSMUST00000104489 104 ntBASIC-0.36□□□□□ -2.47
Lire1P11260 Gm14947-201ENSMUST00000133704 303 ntBASIC-0.36□□□□□ -2.47
Lire1P11260 Mir327-201ENSMUST00000199328 69 ntBASIC-0.36□□□□□ -2.47
Lire1P11260 AL845349.1-201ENSMUST00000213794 78 ntBASIC-0.36□□□□□ -2.47
Lire1P11260 Mir488-201ENSMUST00000093595 109 ntBASIC-0.36□□□□□ -2.47
Lire1P11260 Gm23661-201ENSMUST00000122630 87 ntBASIC-0.37□□□□□ -2.47
Lire1P11260 Gm25149-201ENSMUST00000157119 82 ntBASIC-0.37□□□□□ -2.47
Lire1P11260 Gm23003-201ENSMUST00000179948 107 ntBASIC-0.37□□□□□ -2.47
Lire1P11260 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC-0.37□□□□□ -2.47
Lire1P11260 Gm14838-201ENSMUST00000118913 248 ntBASIC-0.38□□□□□ -2.47
Lire1P11260 Gm23314-201ENSMUST00000157218 107 ntBASIC-0.38□□□□□ -2.47
Lire1P11260 Gm22788-201ENSMUST00000157876 61 ntBASIC-0.38□□□□□ -2.47
Lire1P11260 Gm27735-201ENSMUST00000185085 76 ntBASIC-0.38□□□□□ -2.47
Lire1P11260 Gm22489-201ENSMUST00000116813 62 ntBASIC-0.39□□□□□ -2.47
Lire1P11260 Gm25985-201ENSMUST00000122677 107 ntBASIC-0.39□□□□□ -2.47
Lire1P11260 Gm24009-201ENSMUST00000157734 93 ntBASIC-0.39□□□□□ -2.47
Lire1P11260 Gm23159-201ENSMUST00000175088 77 ntBASIC-0.39□□□□□ -2.47
Lire1P11260 Gm27792-201ENSMUST00000184031 115 ntBASIC-0.39□□□□□ -2.47
Lire1P11260 Snord61-201ENSMUST00000083176 71 ntBASIC-0.39□□□□□ -2.47
Lire1P11260 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC-0.4□□□□□ -2.47
Lire1P11260 Gm22838-201ENSMUST00000158437 99 ntBASIC-0.4□□□□□ -2.47
Lire1P11260 Gm24225-201ENSMUST00000158825 98 ntBASIC-0.4□□□□□ -2.47
Lire1P11260 Gm18665-201ENSMUST00000189783 270 ntBASIC-0.4□□□□□ -2.47
Lire1P11260 Mir302d-201ENSMUST00000083513 66 ntBASIC-0.4□□□□□ -2.47
Lire1P11260 Gm24887-201ENSMUST00000104386 108 ntBASIC-0.41□□□□□ -2.48
Lire1P11260 Gm11694-201ENSMUST00000118637 159 ntBASIC-0.41□□□□□ -2.48
Lire1P11260 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC-0.42□□□□□ -2.48
Lire1P11260 Gm22337-201ENSMUST00000157721 132 ntBASIC-0.42□□□□□ -2.48
Lire1P11260 Gm25184-201ENSMUST00000157753 163 ntBASIC-0.42□□□□□ -2.48
Lire1P11260 Gm22675-201ENSMUST00000158430 104 ntBASIC-0.42□□□□□ -2.48
Lire1P11260 Gm22324-201ENSMUST00000158903 114 ntBASIC-0.42□□□□□ -2.48
Lire1P11260 Gm27803-201ENSMUST00000183763 119 ntBASIC-0.42□□□□□ -2.48
Lire1P11260 Snora16a-202ENSMUST00000196061 137 ntBASIC-0.42□□□□□ -2.48
Lire1P11260 Gm44375-201ENSMUST00000196657 150 ntBASIC-0.42□□□□□ -2.48
Lire1P11260 Gm25328-201ENSMUST00000175013 107 ntBASIC-0.43□□□□□ -2.48
Lire1P11260 Gm22951-201ENSMUST00000179471 107 ntBASIC-0.43□□□□□ -2.48
Lire1P11260 Gm27285-201ENSMUST00000183875 127 ntBASIC-0.43□□□□□ -2.48
Lire1P11260 AC124687.1-201ENSMUST00000221868 189 ntBASIC-0.43□□□□□ -2.48
Lire1P11260 Gm24073-201ENSMUST00000158177 106 ntBASIC-0.44□□□□□ -2.48
Lire1P11260 Gm44489-201ENSMUST00000104619 97 ntBASIC-0.45□□□□□ -2.48
Lire1P11260 Gm25056-201ENSMUST00000157372 62 ntBASIC-0.45□□□□□ -2.48
Lire1P11260 Gm25032-201ENSMUST00000175411 84 ntBASIC-0.45□□□□□ -2.48
Lire1P11260 AC125190.3-201ENSMUST00000223224 121 ntBASIC-0.45□□□□□ -2.48
Lire1P11260 Gm25797-201ENSMUST00000082640 107 ntBASIC-0.45□□□□□ -2.48
Lire1P11260 Gm25141-201ENSMUST00000083177 107 ntBASIC-0.45□□□□□ -2.48
Lire1P11260 Gm23654-201ENSMUST00000116758 126 ntBASIC-0.46□□□□□ -2.48
Lire1P11260 n-R5s39-201ENSMUST00000122613 108 ntBASIC-0.46□□□□□ -2.48
Lire1P11260 Mir1298-201ENSMUST00000116681 98 ntBASIC-0.47□□□□□ -2.48
Lire1P11260 Gm22966-201ENSMUST00000157957 129 ntBASIC-0.47□□□□□ -2.48
Lire1P11260 Gm24823-201ENSMUST00000175092 91 ntBASIC-0.47□□□□□ -2.48
Lire1P11260 Mir344-2-201ENSMUST00000175446 80 ntBASIC-0.47□□□□□ -2.48
Lire1P11260 Gm37750-201ENSMUST00000193563 129 ntBASIC-0.47□□□□□ -2.48
Lire1P11260 Snord80-202ENSMUST00000199023 77 ntBASIC-0.47□□□□□ -2.48
Lire1P11260 Gm23442-201ENSMUST00000082919 134 ntBASIC-0.47□□□□□ -2.48
Lire1P11260 Mir145a-201ENSMUST00000083658 70 ntBASIC-0.47□□□□□ -2.48
Lire1P11260 Mir363-201ENSMUST00000093598 75 ntBASIC-0.47□□□□□ -2.48
Lire1P11260 Gm26403-201ENSMUST00000158500 105 ntBASIC-0.48□□□□□ -2.49
Lire1P11260 Gm25366-201ENSMUST00000158845 124 ntBASIC-0.48□□□□□ -2.49
Lire1P11260 Gm26007-201ENSMUST00000158798 120 ntBASIC-0.49□□□□□ -2.49
Lire1P11260 Gm26712-201ENSMUST00000180813 217 ntBASIC-0.49□□□□□ -2.49
Lire1P11260 Gm44922-201ENSMUST00000206690 90 ntBASIC-0.49□□□□□ -2.49
Retrieved 100 of 76,532 protein–RNA pairs in 160.4 ms