Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm23186-201ENSMUST00000180078 107 ntBASIC-1.37□□□□□ -2.63
Hmgb3O54879 Gm24614-201ENSMUST00000083269 107 ntBASIC-1.37□□□□□ -2.63
Hmgb3O54879 Mir146-201ENSMUST00000083667 65 ntBASIC-1.37□□□□□ -2.63
Hmgb3O54879 Gm25895-201ENSMUST00000083714 100 ntBASIC-1.37□□□□□ -2.63
Hmgb3O54879 Gm38019-201ENSMUST00000195133 380 ntBASIC-1.38□□□□□ -2.63
Hmgb3O54879 AC166341.3-201ENSMUST00000221861 114 ntBASIC-1.38□□□□□ -2.63
Hmgb3O54879 Gm25186-201ENSMUST00000083909 108 ntBASIC-1.38□□□□□ -2.63
Hmgb3O54879 Mir466f-1-201ENSMUST00000104779 94 ntBASIC-1.39□□□□□ -2.63
Hmgb3O54879 Gm22157-201ENSMUST00000158410 104 ntBASIC-1.39□□□□□ -2.63
Hmgb3O54879 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC-1.39□□□□□ -2.63
Hmgb3O54879 AC158982.2-201ENSMUST00000226283 184 ntBASIC-1.39□□□□□ -2.63
Hmgb3O54879 Gm22455-201ENSMUST00000082580 71 ntBASIC-1.39□□□□□ -2.63
Hmgb3O54879 Mir201-201ENSMUST00000083470 66 ntBASIC-1.39□□□□□ -2.63
Hmgb3O54879 Gm22720-201ENSMUST00000122710 87 ntBASIC-1.4□□□□□ -2.63
Hmgb3O54879 Gm25223-201ENSMUST00000158200 110 ntBASIC-1.4□□□□□ -2.63
Hmgb3O54879 Mir384-201ENSMUST00000083565 88 ntBASIC-1.4□□□□□ -2.63
Hmgb3O54879 Snord42b-201ENSMUST00000083742 69 ntBASIC-1.4□□□□□ -2.63
Hmgb3O54879 Gm22013-201ENSMUST00000158788 103 ntBASIC-1.41□□□□□ -2.64
Hmgb3O54879 Mir5624-201ENSMUST00000176635 61 ntBASIC-1.41□□□□□ -2.64
Hmgb3O54879 Gm27521-201ENSMUST00000184022 64 ntBASIC-1.41□□□□□ -2.64
Hmgb3O54879 Gm24764-201ENSMUST00000083686 199 ntBASIC-1.41□□□□□ -2.64
Hmgb3O54879 Gm23941-201ENSMUST00000101953 107 ntBASIC-1.42□□□□□ -2.64
Hmgb3O54879 Gm25015-201ENSMUST00000158400 128 ntBASIC-1.42□□□□□ -2.64
Hmgb3O54879 Gm22946-201ENSMUST00000158558 82 ntBASIC-1.42□□□□□ -2.64
Hmgb3O54879 Gm44858-201ENSMUST00000207360 154 ntBASIC-1.42□□□□□ -2.64
Hmgb3O54879 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC-1.42□□□□□ -2.64
Hmgb3O54879 Gm22032-201ENSMUST00000116946 116 ntBASIC-1.43□□□□□ -2.64
Hmgb3O54879 Gm25184-201ENSMUST00000157753 163 ntBASIC-1.43□□□□□ -2.64
Hmgb3O54879 Gm23859-201ENSMUST00000158383 64 ntBASIC-1.43□□□□□ -2.64
Hmgb3O54879 Gm26360-201ENSMUST00000158872 103 ntBASIC-1.43□□□□□ -2.64
Hmgb3O54879 Mir7227-201ENSMUST00000200408 59 ntBASIC-1.43□□□□□ -2.64
Hmgb3O54879 AC192333.1-201ENSMUST00000224573 376 ntBASIC-1.43□□□□□ -2.64
Hmgb3O54879 Gm25296-201ENSMUST00000082566 67 ntBASIC-1.43□□□□□ -2.64
Hmgb3O54879 Gm26438-201ENSMUST00000082593 107 ntBASIC-1.43□□□□□ -2.64
Hmgb3O54879 Mir669d-2-201ENSMUST00000116854 86 ntBASIC-1.44□□□□□ -2.64
Hmgb3O54879 Gm23900-201ENSMUST00000157569 108 ntBASIC-1.44□□□□□ -2.64
Hmgb3O54879 Gm22612-201ENSMUST00000158293 101 ntBASIC-1.44□□□□□ -2.64
Hmgb3O54879 Gm24762-201ENSMUST00000083689 104 ntBASIC-1.44□□□□□ -2.64
Hmgb3O54879 Gm23072-201ENSMUST00000158243 123 ntBASIC-1.45□□□□□ -2.64
Hmgb3O54879 Gm24737-201ENSMUST00000158861 100 ntBASIC-1.45□□□□□ -2.64
Hmgb3O54879 Gm45313-201ENSMUST00000210584 178 ntBASIC-1.45□□□□□ -2.64
Hmgb3O54879 Gm10222-201ENSMUST00000088336 294 ntBASIC-1.45□□□□□ -2.64
Hmgb3O54879 AC168880.2-201ENSMUST00000224488 201 ntBASIC-1.46□□□□□ -2.64
Hmgb3O54879 AC167192.1-201ENSMUST00000225908 139 ntBASIC-1.46□□□□□ -2.64
Hmgb3O54879 Gm29344-201ENSMUST00000068143 210 ntBASIC-1.46□□□□□ -2.64
Hmgb3O54879 Gm22364-201ENSMUST00000083097 98 ntBASIC-1.46□□□□□ -2.64
Hmgb3O54879 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC-1.47□□□□□ -2.64
Hmgb3O54879 Gm27749-201ENSMUST00000183651 125 ntBASIC-1.47□□□□□ -2.64
Hmgb3O54879 Mir181a-1-201ENSMUST00000083631 87 ntBASIC-1.47□□□□□ -2.64
Hmgb3O54879 Mir3094-201ENSMUST00000175121 64 ntBASIC-1.48□□□□□ -2.65
Hmgb3O54879 Gm23291-201ENSMUST00000175611 78 ntBASIC-1.48□□□□□ -2.65
Hmgb3O54879 Gm23772-201ENSMUST00000104433 102 ntBASIC-1.49□□□□□ -2.65
Hmgb3O54879 Gm24108-201ENSMUST00000175495 77 ntBASIC-1.49□□□□□ -2.65
Hmgb3O54879 Gm37404-201ENSMUST00000195726 359 ntBASIC-1.49□□□□□ -2.65
Hmgb3O54879 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC-1.49□□□□□ -2.65
Hmgb3O54879 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC-1.5□□□□□ -2.65
Hmgb3O54879 Gm11388-201ENSMUST00000120908 159 ntBASIC-1.5□□□□□ -2.65
Hmgb3O54879 Gm26291-201ENSMUST00000158889 137 ntBASIC-1.5□□□□□ -2.65
Hmgb3O54879 Gm27317-201ENSMUST00000183533 95 ntBASIC-1.5□□□□□ -2.65
Hmgb3O54879 Mirlet7b-201ENSMUST00000083630 85 ntBASIC-1.5□□□□□ -2.65
Hmgb3O54879 Gm26018-201ENSMUST00000104406 128 ntBASIC-1.51□□□□□ -2.65
Hmgb3O54879 Gm14502-201ENSMUST00000118154 113 ntBASIC-1.51□□□□□ -2.65
Hmgb3O54879 Snord8-201ENSMUST00000175303 110 ntBASIC-1.51□□□□□ -2.65
Hmgb3O54879 Gm27977-201ENSMUST00000185159 111 ntBASIC-1.51□□□□□ -2.65
Hmgb3O54879 Gm26131-201ENSMUST00000082725 110 ntBASIC-1.51□□□□□ -2.65
Hmgb3O54879 Gm25275-201ENSMUST00000104297 129 ntBASIC-1.52□□□□□ -2.65
Hmgb3O54879 Gm11322-201ENSMUST00000118095 435 ntBASIC-1.52□□□□□ -2.65
Hmgb3O54879 Gm11420-201ENSMUST00000120047 402 ntBASIC-1.52□□□□□ -2.65
Hmgb3O54879 Gm26026-201ENSMUST00000122726 123 ntBASIC-1.52□□□□□ -2.65
Hmgb3O54879 Mir6961-201ENSMUST00000183874 67 ntBASIC-1.52□□□□□ -2.65
Hmgb3O54879 Gm23451-201ENSMUST00000083328 122 ntBASIC-1.52□□□□□ -2.65
Hmgb3O54879 n-R5s153-201ENSMUST00000083451 116 ntBASIC-1.52□□□□□ -2.65
Hmgb3O54879 Gm12815-201ENSMUST00000121737 135 ntBASIC-1.53□□□□□ -2.65
Hmgb3O54879 Gm22319-201ENSMUST00000157147 122 ntBASIC-1.53□□□□□ -2.65
Hmgb3O54879 Gm25248-201ENSMUST00000175473 98 ntBASIC-1.53□□□□□ -2.65
Hmgb3O54879 Gm37796-201ENSMUST00000195327 134 ntBASIC-1.53□□□□□ -2.65
Hmgb3O54879 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC-1.53□□□□□ -2.65
Hmgb3O54879 Gm23080-201ENSMUST00000157846 103 ntBASIC-1.54□□□□□ -2.66
Hmgb3O54879 Gm24498-201ENSMUST00000158445 102 ntBASIC-1.54□□□□□ -2.66
Hmgb3O54879 Gm28489-201ENSMUST00000186655 316 ntBASIC-1.54□□□□□ -2.66
Hmgb3O54879 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC-1.54□□□□□ -2.66
Hmgb3O54879 AC165157.3-201ENSMUST00000220815 103 ntBASIC-1.54□□□□□ -2.66
Hmgb3O54879 CT030166.3-201ENSMUST00000223203 193 ntBASIC-1.54□□□□□ -2.66
Hmgb3O54879 Gm27934-201ENSMUST00000158795 63 ntBASIC-1.55□□□□□ -2.66
Hmgb3O54879 AC153646.2-201ENSMUST00000220516 109 ntBASIC-1.55□□□□□ -2.66
Hmgb3O54879 Snord45b-201ENSMUST00000082797 71 ntBASIC-1.55□□□□□ -2.66
Hmgb3O54879 Gm24704-201ENSMUST00000093715 107 ntBASIC-1.55□□□□□ -2.66
Hmgb3O54879 Mir764-201ENSMUST00000103259 108 ntBASIC-1.56□□□□□ -2.66
Hmgb3O54879 Gm28927-201ENSMUST00000191528 272 ntBASIC-1.56□□□□□ -2.66
Hmgb3O54879 Gm23406-201ENSMUST00000082537 122 ntBASIC-1.56□□□□□ -2.66
Hmgb3O54879 Gm25899-201ENSMUST00000082672 141 ntBASIC-1.56□□□□□ -2.66
Hmgb3O54879 Mir669o-201ENSMUST00000103898 96 ntBASIC-1.57□□□□□ -2.66
Hmgb3O54879 Gm24336-201ENSMUST00000104203 146 ntBASIC-1.57□□□□□ -2.66
Hmgb3O54879 Gm14533-201ENSMUST00000117088 93 ntBASIC-1.57□□□□□ -2.66
Hmgb3O54879 Gm26279-201ENSMUST00000157095 102 ntBASIC-1.57□□□□□ -2.66
Hmgb3O54879 Gm22732-201ENSMUST00000158093 121 ntBASIC-1.57□□□□□ -2.66
Hmgb3O54879 Gm23812-201ENSMUST00000175156 84 ntBASIC-1.57□□□□□ -2.66
Hmgb3O54879 Gm23374-201ENSMUST00000175408 84 ntBASIC-1.57□□□□□ -2.66
Hmgb3O54879 Gm27747-201ENSMUST00000184707 85 ntBASIC-1.57□□□□□ -2.66
Hmgb3O54879 Gm26447-201ENSMUST00000082448 129 ntBASIC-1.57□□□□□ -2.66
Retrieved 100 of 76,532 protein–RNA pairs in 156.1 ms