Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm44602-201ENSMUST00000205948 132 ntBASIC-0.16□□□□□ -2.43
Scn3aA2ASI5 Gm22744-201ENSMUST00000083444 65 ntBASIC-0.16□□□□□ -2.43
Scn3aA2ASI5 Mir6928-201ENSMUST00000185166 70 ntBASIC-0.17□□□□□ -2.44
Scn3aA2ASI5 Snord80-202ENSMUST00000199023 77 ntBASIC-0.17□□□□□ -2.44
Scn3aA2ASI5 Mir382-201ENSMUST00000083494 76 ntBASIC-0.17□□□□□ -2.44
Scn3aA2ASI5 n-R5s12-201ENSMUST00000083785 119 ntBASIC-0.17□□□□□ -2.44
Scn3aA2ASI5 Gm25309-201ENSMUST00000116728 126 ntBASIC-0.17□□□□□ -2.44
Scn3aA2ASI5 Gm25791-201ENSMUST00000083292 137 ntBASIC-0.17□□□□□ -2.44
Scn3aA2ASI5 Mir7651-201ENSMUST00000184154 64 ntBASIC-0.18□□□□□ -2.44
Scn3aA2ASI5 Gm28270-201ENSMUST00000188550 109 ntBASIC-0.18□□□□□ -2.44
Scn3aA2ASI5 Gm28328-201ENSMUST00000188869 109 ntBASIC-0.18□□□□□ -2.44
Scn3aA2ASI5 Gm29047-201ENSMUST00000189816 108 ntBASIC-0.18□□□□□ -2.44
Scn3aA2ASI5 Mir216b-201ENSMUST00000102363 86 ntBASIC-0.19□□□□□ -2.44
Scn3aA2ASI5 Gm23253-201ENSMUST00000157441 104 ntBASIC-0.19□□□□□ -2.44
Scn3aA2ASI5 Gm25307-201ENSMUST00000158885 106 ntBASIC-0.19□□□□□ -2.44
Scn3aA2ASI5 Gm24415-201ENSMUST00000180218 107 ntBASIC-0.19□□□□□ -2.44
Scn3aA2ASI5 Gm23378-201ENSMUST00000082942 107 ntBASIC-0.19□□□□□ -2.44
Scn3aA2ASI5 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC-0.19□□□□□ -2.44
Scn3aA2ASI5 Gm23320-201ENSMUST00000104462 127 ntBASIC-0.19□□□□□ -2.44
Scn3aA2ASI5 Gm24009-201ENSMUST00000157734 93 ntBASIC-0.19□□□□□ -2.44
Scn3aA2ASI5 Gm22100-201ENSMUST00000157926 63 ntBASIC-0.19□□□□□ -2.44
Scn3aA2ASI5 Gm26712-201ENSMUST00000180813 217 ntBASIC-0.19□□□□□ -2.44
Scn3aA2ASI5 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC-0.19□□□□□ -2.44
Scn3aA2ASI5 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC-0.19□□□□□ -2.44
Scn3aA2ASI5 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC-0.19□□□□□ -2.44
Scn3aA2ASI5 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC-0.19□□□□□ -2.44
Scn3aA2ASI5 Gm18665-201ENSMUST00000189783 270 ntBASIC-0.19□□□□□ -2.44
Scn3aA2ASI5 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC-0.19□□□□□ -2.44
Scn3aA2ASI5 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC-0.19□□□□□ -2.44
Scn3aA2ASI5 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC-0.19□□□□□ -2.44
Scn3aA2ASI5 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC-0.19□□□□□ -2.44
Scn3aA2ASI5 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC-0.19□□□□□ -2.44
Scn3aA2ASI5 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC-0.19□□□□□ -2.44
Scn3aA2ASI5 AC124687.1-201ENSMUST00000221868 189 ntBASIC-0.19□□□□□ -2.44
Scn3aA2ASI5 Gm22287-201ENSMUST00000083197 107 ntBASIC-0.19□□□□□ -2.44
Scn3aA2ASI5 Gm27579-201ENSMUST00000158113 63 ntBASIC-0.21□□□□□ -2.44
Scn3aA2ASI5 Gm44338-201ENSMUST00000198614 110 ntBASIC-0.21□□□□□ -2.44
Scn3aA2ASI5 Gm23442-201ENSMUST00000082919 134 ntBASIC-0.21□□□□□ -2.44
Scn3aA2ASI5 Mir214-201ENSMUST00000083582 110 ntBASIC-0.21□□□□□ -2.44
Scn3aA2ASI5 Gm24522-201ENSMUST00000083964 108 ntBASIC-0.21□□□□□ -2.44
Scn3aA2ASI5 Gm37545-201ENSMUST00000186512 148 ntBASIC-0.21□□□□□ -2.44
Scn3aA2ASI5 Gm22951-201ENSMUST00000179471 107 ntBASIC-0.22□□□□□ -2.44
Scn3aA2ASI5 Gm25802-201ENSMUST00000082639 77 ntBASIC-0.22□□□□□ -2.44
Scn3aA2ASI5 Gm22757-201ENSMUST00000102279 96 ntBASIC-0.23□□□□□ -2.45
Scn3aA2ASI5 Gm13065-201ENSMUST00000119178 141 ntBASIC-0.23□□□□□ -2.45
Scn3aA2ASI5 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC-0.23□□□□□ -2.45
Scn3aA2ASI5 Gm25184-201ENSMUST00000157753 163 ntBASIC-0.23□□□□□ -2.45
Scn3aA2ASI5 Gm22788-201ENSMUST00000157876 61 ntBASIC-0.23□□□□□ -2.45
Scn3aA2ASI5 Gm27332-201ENSMUST00000184893 112 ntBASIC-0.23□□□□□ -2.45
Scn3aA2ASI5 CT030166.3-201ENSMUST00000223203 193 ntBASIC-0.23□□□□□ -2.45
Scn3aA2ASI5 Mir302d-201ENSMUST00000083513 66 ntBASIC-0.23□□□□□ -2.45
Scn3aA2ASI5 Gm22675-201ENSMUST00000158430 104 ntBASIC-0.24□□□□□ -2.45
Scn3aA2ASI5 Gm26398-201ENSMUST00000179015 127 ntBASIC-0.24□□□□□ -2.45
Scn3aA2ASI5 Gm23947-201ENSMUST00000093636 107 ntBASIC-0.24□□□□□ -2.45
Scn3aA2ASI5 Gm21940-201ENSMUST00000204940 2278 ntBASIC-0.24□□□□□ -2.45
Scn3aA2ASI5 Snord90-201ENSMUST00000104568 111 ntBASIC-0.25□□□□□ -2.45
Scn3aA2ASI5 Gm25249-201ENSMUST00000175471 78 ntBASIC-0.25□□□□□ -2.45
Scn3aA2ASI5 Mir21c-201ENSMUST00000184910 78 ntBASIC-0.25□□□□□ -2.45
Scn3aA2ASI5 AC125190.3-201ENSMUST00000223224 121 ntBASIC-0.25□□□□□ -2.45
Scn3aA2ASI5 Gm25654-201ENSMUST00000158467 88 ntBASIC-0.25□□□□□ -2.45
Scn3aA2ASI5 Gm26426-201ENSMUST00000177866 123 ntBASIC-0.25□□□□□ -2.45
Scn3aA2ASI5 Gm26060-201ENSMUST00000180094 123 ntBASIC-0.25□□□□□ -2.45
Scn3aA2ASI5 Gm23303-201ENSMUST00000082714 152 ntBASIC-0.25□□□□□ -2.45
Scn3aA2ASI5 Gm22105-201ENSMUST00000116734 116 ntBASIC-0.26□□□□□ -2.45
Scn3aA2ASI5 Gm23970-201ENSMUST00000083319 107 ntBASIC-0.26□□□□□ -2.45
Scn3aA2ASI5 Gm44489-201ENSMUST00000104619 97 ntBASIC-0.26□□□□□ -2.45
Scn3aA2ASI5 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC-0.26□□□□□ -2.45
Scn3aA2ASI5 Gm24587-201ENSMUST00000116697 89 ntBASIC-0.27□□□□□ -2.45
Scn3aA2ASI5 Gm23986-201ENSMUST00000157144 63 ntBASIC-0.27□□□□□ -2.45
Scn3aA2ASI5 Gm24073-201ENSMUST00000158177 106 ntBASIC-0.27□□□□□ -2.45
Scn3aA2ASI5 Gm25014-201ENSMUST00000158401 103 ntBASIC-0.27□□□□□ -2.45
Scn3aA2ASI5 Gm24884-201ENSMUST00000158784 119 ntBASIC-0.27□□□□□ -2.45
Scn3aA2ASI5 Gm23977-201ENSMUST00000177871 74 ntBASIC-0.27□□□□□ -2.45
Scn3aA2ASI5 Gm44327-201ENSMUST00000200068 117 ntBASIC-0.27□□□□□ -2.45
Scn3aA2ASI5 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC-0.27□□□□□ -2.45
Scn3aA2ASI5 AL845349.1-201ENSMUST00000213794 78 ntBASIC-0.27□□□□□ -2.45
Scn3aA2ASI5 Gm22337-201ENSMUST00000157721 132 ntBASIC-0.28□□□□□ -2.45
Scn3aA2ASI5 Gm26007-201ENSMUST00000158798 120 ntBASIC-0.28□□□□□ -2.45
Scn3aA2ASI5 Gm22259-201ENSMUST00000178926 107 ntBASIC-0.28□□□□□ -2.45
Scn3aA2ASI5 mt-Td-201ENSMUST00000082404 70 ntBASIC-0.28□□□□□ -2.45
Scn3aA2ASI5 Gm25482-201ENSMUST00000083225 107 ntBASIC-0.28□□□□□ -2.45
Scn3aA2ASI5 Gm23900-201ENSMUST00000157569 108 ntBASIC-0.28□□□□□ -2.46
Scn3aA2ASI5 Mir3470a-201ENSMUST00000175223 77 ntBASIC-0.28□□□□□ -2.46
Scn3aA2ASI5 Mir6904-201ENSMUST00000183443 67 ntBASIC-0.28□□□□□ -2.46
Scn3aA2ASI5 mt-Tc-201ENSMUST00000082400 66 ntBASIC-0.28□□□□□ -2.46
Scn3aA2ASI5 Gm26062-201ENSMUST00000083379 107 ntBASIC-0.28□□□□□ -2.46
Scn3aA2ASI5 Gm26084-201ENSMUST00000157903 104 ntBASIC-0.29□□□□□ -2.46
Scn3aA2ASI5 Gm43927-201ENSMUST00000204599 117 ntBASIC-0.29□□□□□ -2.46
Scn3aA2ASI5 Gm24524-201ENSMUST00000082925 170 ntBASIC-0.29□□□□□ -2.46
Scn3aA2ASI5 Gm26011-201ENSMUST00000104410 104 ntBASIC-0.3□□□□□ -2.46
Scn3aA2ASI5 Gm27977-201ENSMUST00000185159 111 ntBASIC-0.3□□□□□ -2.46
Scn3aA2ASI5 Gm22973-201ENSMUST00000083298 191 ntBASIC-0.3□□□□□ -2.46
Scn3aA2ASI5 Mir183-201ENSMUST00000083685 70 ntBASIC-0.3□□□□□ -2.46
Scn3aA2ASI5 Gm23012-201ENSMUST00000104149 83 ntBASIC-0.3□□□□□ -2.46
Scn3aA2ASI5 Gm24649-201ENSMUST00000157106 134 ntBASIC-0.3□□□□□ -2.46
Scn3aA2ASI5 Gm17528-201ENSMUST00000171026 239 ntBASIC-0.3□□□□□ -2.46
Scn3aA2ASI5 Gm25032-201ENSMUST00000175411 84 ntBASIC-0.3□□□□□ -2.46
Scn3aA2ASI5 Gm27735-201ENSMUST00000185085 76 ntBASIC-0.3□□□□□ -2.46
Scn3aA2ASI5 Gm43907-201ENSMUST00000203128 117 ntBASIC-0.3□□□□□ -2.46
Scn3aA2ASI5 Gm23445-201ENSMUST00000082800 107 ntBASIC-0.3□□□□□ -2.46
Retrieved 100 of 76,532 protein–RNA pairs in 144.6 ms