Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Gm28001-201ENSMUST00000183561 117 ntBASIC0.1□□□□□ -2.39
Trbv17A0A140T8P8 Gm23337-201ENSMUST00000158959 118 ntBASIC0.09□□□□□ -2.4
Trbv17A0A140T8P8 Gm23864-201ENSMUST00000177607 107 ntBASIC0.09□□□□□ -2.4
Trbv17A0A140T8P8 Gm44602-201ENSMUST00000205948 132 ntBASIC0.09□□□□□ -2.4
Trbv17A0A140T8P8 Snord95-201ENSMUST00000082846 68 ntBASIC0.09□□□□□ -2.4
Trbv17A0A140T8P8 Gm26011-201ENSMUST00000104410 104 ntBASIC0.08□□□□□ -2.4
Trbv17A0A140T8P8 Gm23990-201ENSMUST00000117031 117 ntBASIC0.08□□□□□ -2.4
Trbv17A0A140T8P8 Gm25797-201ENSMUST00000082640 107 ntBASIC0.08□□□□□ -2.4
Trbv17A0A140T8P8 Snord47-201ENSMUST00000083034 77 ntBASIC0.08□□□□□ -2.4
Trbv17A0A140T8P8 Snord70-201ENSMUST00000104157 87 ntBASIC0.07□□□□□ -2.4
Trbv17A0A140T8P8 Gm25496-201ENSMUST00000104430 120 ntBASIC0.07□□□□□ -2.4
Trbv17A0A140T8P8 Snord90-201ENSMUST00000104568 111 ntBASIC0.07□□□□□ -2.4
Trbv17A0A140T8P8 Gm25060-201ENSMUST00000157374 130 ntBASIC0.07□□□□□ -2.4
Trbv17A0A140T8P8 Mir7077-201ENSMUST00000183991 57 ntBASIC0.07□□□□□ -2.4
Trbv17A0A140T8P8 AC136457.1-201ENSMUST00000224195 156 ntBASIC0.07□□□□□ -2.4
Trbv17A0A140T8P8 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC0.07□□□□□ -2.4
Trbv17A0A140T8P8 Mir1197-201ENSMUST00000117037 120 ntBASIC0.06□□□□□ -2.4
Trbv17A0A140T8P8 Mir6896-201ENSMUST00000198033 73 ntBASIC0.06□□□□□ -2.4
Trbv17A0A140T8P8 Gm26202-201ENSMUST00000082910 65 ntBASIC0.06□□□□□ -2.4
Trbv17A0A140T8P8 Gm25316-201ENSMUST00000116826 118 ntBASIC0.05□□□□□ -2.4
Trbv17A0A140T8P8 Gm23661-201ENSMUST00000122630 87 ntBASIC0.05□□□□□ -2.4
Trbv17A0A140T8P8 Gm23761-201ENSMUST00000158347 104 ntBASIC0.05□□□□□ -2.4
Trbv17A0A140T8P8 Gm25633-201ENSMUST00000178565 107 ntBASIC0.05□□□□□ -2.4
Trbv17A0A140T8P8 Gm27980-201ENSMUST00000184094 169 ntBASIC0.05□□□□□ -2.4
Trbv17A0A140T8P8 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC0.05□□□□□ -2.4
Trbv17A0A140T8P8 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
Trbv17A0A140T8P8 Gm24772-201ENSMUST00000158507 110 ntBASIC0.04□□□□□ -2.4
Trbv17A0A140T8P8 Mir8107-201ENSMUST00000184024 117 ntBASIC0.04□□□□□ -2.4
Trbv17A0A140T8P8 Gm24461-201ENSMUST00000082735 103 ntBASIC0.04□□□□□ -2.4
Trbv17A0A140T8P8 Gm24208-201ENSMUST00000082783 135 ntBASIC0.04□□□□□ -2.4
Trbv17A0A140T8P8 Gm22652-201ENSMUST00000083207 131 ntBASIC0.04□□□□□ -2.4
Trbv17A0A140T8P8 Gm22169-201ENSMUST00000083229 107 ntBASIC0.04□□□□□ -2.4
Trbv17A0A140T8P8 Mir200b-201ENSMUST00000083615 70 ntBASIC0.04□□□□□ -2.4
Trbv17A0A140T8P8 Mir216b-201ENSMUST00000102363 86 ntBASIC0.03□□□□□ -2.4
Trbv17A0A140T8P8 Gm11694-201ENSMUST00000118637 159 ntBASIC0.03□□□□□ -2.4
Trbv17A0A140T8P8 Gm24246-201ENSMUST00000157315 132 ntBASIC0.03□□□□□ -2.4
Trbv17A0A140T8P8 Gm23504-201ENSMUST00000158988 95 ntBASIC0.03□□□□□ -2.4
Trbv17A0A140T8P8 Traj61-201ENSMUST00000165025 72 ntBASIC0.03□□□□□ -2.4
Trbv17A0A140T8P8 Gm26225-201ENSMUST00000082508 135 ntBASIC0.03□□□□□ -2.4
Trbv17A0A140T8P8 Mir18-201ENSMUST00000083469 96 ntBASIC0.03□□□□□ -2.4
Trbv17A0A140T8P8 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.03□□□□□ -2.41
Trbv17A0A140T8P8 Gm26091-201ENSMUST00000122704 82 ntBASIC0.02□□□□□ -2.41
Trbv17A0A140T8P8 Gm42845-201ENSMUST00000197766 105 ntBASIC0.02□□□□□ -2.41
Trbv17A0A140T8P8 Gm18502-201ENSMUST00000218679 199 ntBASIC0.02□□□□□ -2.41
Trbv17A0A140T8P8 Gm25629-201ENSMUST00000084001 107 ntBASIC0.02□□□□□ -2.41
Trbv17A0A140T8P8 Gm24009-201ENSMUST00000157734 93 ntBASIC0.01□□□□□ -2.41
Trbv17A0A140T8P8 Gm27297-201ENSMUST00000183395 105 ntBASIC0.01□□□□□ -2.41
Trbv17A0A140T8P8 Gm44327-201ENSMUST00000200068 117 ntBASIC0.01□□□□□ -2.41
Trbv17A0A140T8P8 Gm23708-201ENSMUST00000104367 123 ntBASIC0□□□□□ -2.41
Trbv17A0A140T8P8 Gm24555-201ENSMUST00000104548 124 ntBASIC0□□□□□ -2.41
Trbv17A0A140T8P8 Gm25056-201ENSMUST00000157372 62 ntBASIC0□□□□□ -2.41
Trbv17A0A140T8P8 Gm24073-201ENSMUST00000158177 106 ntBASIC0□□□□□ -2.41
Trbv17A0A140T8P8 Mir7079-201ENSMUST00000184697 69 ntBASIC0□□□□□ -2.41
Trbv17A0A140T8P8 Gm45197-201ENSMUST00000205288 151 ntBASIC0□□□□□ -2.41
Trbv17A0A140T8P8 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC0□□□□□ -2.41
Trbv17A0A140T8P8 Gm25703-201ENSMUST00000083123 151 ntBASIC0□□□□□ -2.41
Trbv17A0A140T8P8 Gm22973-201ENSMUST00000083298 191 ntBASIC0□□□□□ -2.41
Trbv17A0A140T8P8 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0□□□□□ -2.41
Trbv17A0A140T8P8 Gm25006-201ENSMUST00000083813 107 ntBASIC0□□□□□ -2.41
Trbv17A0A140T8P8 Mir764-201ENSMUST00000103259 108 ntBASIC-0.01□□□□□ -2.41
Trbv17A0A140T8P8 Gm23482-201ENSMUST00000104172 122 ntBASIC-0.01□□□□□ -2.41
Trbv17A0A140T8P8 n-R5s39-201ENSMUST00000122613 108 ntBASIC-0.01□□□□□ -2.41
Trbv17A0A140T8P8 Gm24718-201ENSMUST00000157521 136 ntBASIC-0.01□□□□□ -2.41
Trbv17A0A140T8P8 Gm24750-201ENSMUST00000157843 104 ntBASIC-0.01□□□□□ -2.41
Trbv17A0A140T8P8 Mir21c-201ENSMUST00000184910 78 ntBASIC-0.01□□□□□ -2.41
Trbv17A0A140T8P8 Gm28270-201ENSMUST00000188550 109 ntBASIC-0.01□□□□□ -2.41
Trbv17A0A140T8P8 Gm28328-201ENSMUST00000188869 109 ntBASIC-0.01□□□□□ -2.41
Trbv17A0A140T8P8 Gm29047-201ENSMUST00000189816 108 ntBASIC-0.01□□□□□ -2.41
Trbv17A0A140T8P8 Ighv15-1-201ENSMUST00000194450 276 ntBASIC-0.01□□□□□ -2.41
Trbv17A0A140T8P8 Gm44803-201ENSMUST00000204384 156 ntBASIC-0.01□□□□□ -2.41
Trbv17A0A140T8P8 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC-0.01□□□□□ -2.41
Trbv17A0A140T8P8 Gm22981-201ENSMUST00000082611 75 ntBASIC-0.01□□□□□ -2.41
Trbv17A0A140T8P8 Gm25410-201ENSMUST00000083758 137 ntBASIC-0.01□□□□□ -2.41
Trbv17A0A140T8P8 Mir1a-1-201ENSMUST00000093635 77 ntBASIC-0.01□□□□□ -2.41
Trbv17A0A140T8P8 Gm22368-201ENSMUST00000102416 109 ntBASIC-0.02□□□□□ -2.41
Trbv17A0A140T8P8 Gm23260-201ENSMUST00000158317 172 ntBASIC-0.02□□□□□ -2.41
Trbv17A0A140T8P8 Gm24106-201ENSMUST00000175498 127 ntBASIC-0.02□□□□□ -2.41
Trbv17A0A140T8P8 Gm12013-201ENSMUST00000121971 155 ntBASIC-0.03□□□□□ -2.41
Trbv17A0A140T8P8 Gm22788-201ENSMUST00000157876 61 ntBASIC-0.03□□□□□ -2.41
Trbv17A0A140T8P8 Gm23783-201ENSMUST00000157941 102 ntBASIC-0.03□□□□□ -2.41
Trbv17A0A140T8P8 Mir3473d-201ENSMUST00000175346 81 ntBASIC-0.03□□□□□ -2.41
Trbv17A0A140T8P8 Gm44345-201ENSMUST00000199560 135 ntBASIC-0.03□□□□□ -2.41
Trbv17A0A140T8P8 Gm43927-201ENSMUST00000204599 117 ntBASIC-0.03□□□□□ -2.41
Trbv17A0A140T8P8 AC124687.1-201ENSMUST00000221868 189 ntBASIC-0.03□□□□□ -2.41
Trbv17A0A140T8P8 Gm24374-201ENSMUST00000104394 106 ntBASIC-0.04□□□□□ -2.42
Trbv17A0A140T8P8 Gm24524-201ENSMUST00000082925 170 ntBASIC-0.04□□□□□ -2.42
Trbv17A0A140T8P8 Mir669b-201ENSMUST00000102172 97 ntBASIC-0.05□□□□□ -2.42
Trbv17A0A140T8P8 Gm25680-201ENSMUST00000116917 126 ntBASIC-0.05□□□□□ -2.42
Trbv17A0A140T8P8 Gm22635-201ENSMUST00000116962 126 ntBASIC-0.05□□□□□ -2.42
Trbv17A0A140T8P8 Gm26084-201ENSMUST00000157903 104 ntBASIC-0.05□□□□□ -2.42
Trbv17A0A140T8P8 Mir669j-201ENSMUST00000179023 121 ntBASIC-0.05□□□□□ -2.42
Trbv17A0A140T8P8 Gm38208-201ENSMUST00000192476 114 ntBASIC-0.05□□□□□ -2.42
Trbv17A0A140T8P8 Gm25899-201ENSMUST00000082672 141 ntBASIC-0.05□□□□□ -2.42
Trbv17A0A140T8P8 Gm22195-201ENSMUST00000116861 108 ntBASIC-0.06□□□□□ -2.42
Trbv17A0A140T8P8 AC151902.2-201ENSMUST00000226419 301 ntBASIC-0.06□□□□□ -2.42
Trbv17A0A140T8P8 mt-Tc-201ENSMUST00000082400 66 ntBASIC-0.06□□□□□ -2.42
Trbv17A0A140T8P8 Gm22451-201ENSMUST00000122803 151 ntBASIC-0.07□□□□□ -2.42
Trbv17A0A140T8P8 Gm23060-201ENSMUST00000102345 109 ntBASIC-0.08□□□□□ -2.42
Trbv17A0A140T8P8 Gm23654-201ENSMUST00000116758 126 ntBASIC-0.08□□□□□ -2.42
Trbv17A0A140T8P8 Gm25367-201ENSMUST00000158846 106 ntBASIC-0.08□□□□□ -2.42
Retrieved 100 of 76,532 protein–RNA pairs in 644 ms