Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Snord96a-201ENSMUST00000082791 81 ntBASIC1.21□□□□□ -2.22
H2afb3S4R1G7 Mir7-1-201ENSMUST00000083500 108 ntBASIC1.21□□□□□ -2.22
H2afb3S4R1G7 AC127302.3-201ENSMUST00000215480 2791 ntBASIC1.2□□□□□ -2.22
H2afb3S4R1G7 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
H2afb3S4R1G7 Gm25759-201ENSMUST00000103988 129 ntBASIC1.2□□□□□ -2.22
H2afb3S4R1G7 Gm14882-201ENSMUST00000117216 218 ntBASIC1.2□□□□□ -2.22
H2afb3S4R1G7 Gm26253-201ENSMUST00000122493 103 ntBASIC1.2□□□□□ -2.22
H2afb3S4R1G7 Gm23122-201ENSMUST00000157645 103 ntBASIC1.2□□□□□ -2.22
H2afb3S4R1G7 Gm23065-201ENSMUST00000158236 130 ntBASIC1.2□□□□□ -2.22
H2afb3S4R1G7 Gm25976-201ENSMUST00000158695 130 ntBASIC1.2□□□□□ -2.22
H2afb3S4R1G7 Mir7026-201ENSMUST00000184384 67 ntBASIC1.2□□□□□ -2.22
H2afb3S4R1G7 Gm43977-201ENSMUST00000203970 189 ntBASIC1.2□□□□□ -2.22
H2afb3S4R1G7 Gm24524-201ENSMUST00000082925 170 ntBASIC1.2□□□□□ -2.22
H2afb3S4R1G7 Mir20b-201ENSMUST00000102087 80 ntBASIC1.19□□□□□ -2.22
H2afb3S4R1G7 Gm23010-201ENSMUST00000104151 126 ntBASIC1.19□□□□□ -2.22
H2afb3S4R1G7 Gm24588-201ENSMUST00000116696 83 ntBASIC1.19□□□□□ -2.22
H2afb3S4R1G7 Gm11857-201ENSMUST00000119817 324 ntBASIC1.19□□□□□ -2.22
H2afb3S4R1G7 Gm25370-201ENSMUST00000158159 94 ntBASIC1.19□□□□□ -2.22
H2afb3S4R1G7 Gm23114-201ENSMUST00000158478 117 ntBASIC1.19□□□□□ -2.22
H2afb3S4R1G7 Traj60-201ENSMUST00000167781 54 ntBASIC1.19□□□□□ -2.22
H2afb3S4R1G7 Gm27493-201ENSMUST00000184128 78 ntBASIC1.19□□□□□ -2.22
H2afb3S4R1G7 Gm20118-201ENSMUST00000187207 162 ntBASIC1.19□□□□□ -2.22
H2afb3S4R1G7 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
H2afb3S4R1G7 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC1.18□□□□□ -2.22
H2afb3S4R1G7 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC1.18□□□□□ -2.22
H2afb3S4R1G7 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC1.18□□□□□ -2.22
H2afb3S4R1G7 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC1.18□□□□□ -2.22
H2afb3S4R1G7 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC1.18□□□□□ -2.22
H2afb3S4R1G7 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC1.18□□□□□ -2.22
H2afb3S4R1G7 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC1.18□□□□□ -2.22
H2afb3S4R1G7 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC1.18□□□□□ -2.22
H2afb3S4R1G7 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC1.18□□□□□ -2.22
H2afb3S4R1G7 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC1.18□□□□□ -2.22
H2afb3S4R1G7 Gm23245-201ENSMUST00000083370 135 ntBASIC1.18□□□□□ -2.22
H2afb3S4R1G7 Gm25485-201ENSMUST00000104120 132 ntBASIC1.17□□□□□ -2.22
H2afb3S4R1G7 Mir1191-201ENSMUST00000116883 120 ntBASIC1.17□□□□□ -2.22
H2afb3S4R1G7 Mir1899-201ENSMUST00000122798 96 ntBASIC1.17□□□□□ -2.22
H2afb3S4R1G7 Gm24915-201ENSMUST00000157288 78 ntBASIC1.17□□□□□ -2.22
H2afb3S4R1G7 Gm26369-201ENSMUST00000157825 100 ntBASIC1.17□□□□□ -2.22
H2afb3S4R1G7 AC159093.2-201ENSMUST00000227881 297 ntBASIC1.17□□□□□ -2.22
H2afb3S4R1G7 Gm26224-201ENSMUST00000082506 80 ntBASIC1.17□□□□□ -2.22
H2afb3S4R1G7 Gm25636-201ENSMUST00000082666 133 ntBASIC1.17□□□□□ -2.22
H2afb3S4R1G7 Mir1a-1-201ENSMUST00000093635 77 ntBASIC1.17□□□□□ -2.22
H2afb3S4R1G7 Gm23601-201ENSMUST00000157259 131 ntBASIC1.16□□□□□ -2.22
H2afb3S4R1G7 Gm22663-201ENSMUST00000158721 102 ntBASIC1.16□□□□□ -2.22
H2afb3S4R1G7 Gm24223-201ENSMUST00000158827 90 ntBASIC1.16□□□□□ -2.22
H2afb3S4R1G7 Gm22887-201ENSMUST00000178586 107 ntBASIC1.16□□□□□ -2.22
H2afb3S4R1G7 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
H2afb3S4R1G7 Gm24865-201ENSMUST00000103246 96 ntBASIC1.15□□□□□ -2.23
H2afb3S4R1G7 Gm23130-201ENSMUST00000104252 74 ntBASIC1.15□□□□□ -2.23
H2afb3S4R1G7 n-R5s70-201ENSMUST00000122650 116 ntBASIC1.15□□□□□ -2.23
H2afb3S4R1G7 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.15□□□□□ -2.23
H2afb3S4R1G7 Gm24650-201ENSMUST00000157105 103 ntBASIC1.15□□□□□ -2.23
H2afb3S4R1G7 Gm22089-201ENSMUST00000158336 102 ntBASIC1.15□□□□□ -2.23
H2afb3S4R1G7 Mir1961-201ENSMUST00000158643 112 ntBASIC1.15□□□□□ -2.23
H2afb3S4R1G7 Gm22664-201ENSMUST00000158719 105 ntBASIC1.15□□□□□ -2.23
H2afb3S4R1G7 Gm22503-201ENSMUST00000158983 115 ntBASIC1.15□□□□□ -2.23
H2afb3S4R1G7 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.15□□□□□ -2.23
H2afb3S4R1G7 Gm25899-201ENSMUST00000082672 141 ntBASIC1.15□□□□□ -2.23
H2afb3S4R1G7 Snord80-201ENSMUST00000083801 81 ntBASIC1.15□□□□□ -2.23
H2afb3S4R1G7 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
H2afb3S4R1G7 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC1.15□□□□□ -2.23
H2afb3S4R1G7 Gm25110-201ENSMUST00000116684 121 ntBASIC1.14□□□□□ -2.23
H2afb3S4R1G7 Gm25775-201ENSMUST00000116716 121 ntBASIC1.14□□□□□ -2.23
H2afb3S4R1G7 Gm24795-201ENSMUST00000116737 121 ntBASIC1.14□□□□□ -2.23
H2afb3S4R1G7 Gm25171-201ENSMUST00000116926 121 ntBASIC1.14□□□□□ -2.23
H2afb3S4R1G7 Gm25831-201ENSMUST00000158924 163 ntBASIC1.14□□□□□ -2.23
H2afb3S4R1G7 Gm22801-201ENSMUST00000175624 84 ntBASIC1.14□□□□□ -2.23
H2afb3S4R1G7 Mir7091-201ENSMUST00000184075 79 ntBASIC1.14□□□□□ -2.23
H2afb3S4R1G7 Gm28767-201ENSMUST00000188601 114 ntBASIC1.14□□□□□ -2.23
H2afb3S4R1G7 Gm23951-201ENSMUST00000104029 132 ntBASIC1.13□□□□□ -2.23
H2afb3S4R1G7 Gm24728-201ENSMUST00000158226 125 ntBASIC1.13□□□□□ -2.23
H2afb3S4R1G7 Gm26398-201ENSMUST00000179015 127 ntBASIC1.13□□□□□ -2.23
H2afb3S4R1G7 Gm16399-201ENSMUST00000181423 219 ntBASIC1.13□□□□□ -2.23
H2afb3S4R1G7 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.13□□□□□ -2.23
H2afb3S4R1G7 Gm23377-201ENSMUST00000082943 126 ntBASIC1.13□□□□□ -2.23
H2afb3S4R1G7 Mir30c-2-201ENSMUST00000083633 84 ntBASIC1.13□□□□□ -2.23
H2afb3S4R1G7 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
H2afb3S4R1G7 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC1.12□□□□□ -2.23
H2afb3S4R1G7 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
H2afb3S4R1G7 Mir301b-201ENSMUST00000102333 97 ntBASIC1.11□□□□□ -2.23
H2afb3S4R1G7 Gm23244-201ENSMUST00000083375 92 ntBASIC1.11□□□□□ -2.23
H2afb3S4R1G7 Gm14400-201ENSMUST00000117234 2135 ntBASIC1.1□□□□□ -2.23
H2afb3S4R1G7 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
H2afb3S4R1G7 Gm24902-201ENSMUST00000158126 123 ntBASIC1.1□□□□□ -2.23
H2afb3S4R1G7 Gm25901-201ENSMUST00000158494 130 ntBASIC1.1□□□□□ -2.23
H2afb3S4R1G7 Gm26363-201ENSMUST00000158866 83 ntBASIC1.1□□□□□ -2.23
H2afb3S4R1G7 Gm27420-201ENSMUST00000183823 79 ntBASIC1.1□□□□□ -2.23
H2afb3S4R1G7 Mir6390-201ENSMUST00000184405 129 ntBASIC1.1□□□□□ -2.23
H2afb3S4R1G7 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC1.1□□□□□ -2.23
H2afb3S4R1G7 Gm23881-201ENSMUST00000116872 66 ntBASIC1.09□□□□□ -2.23
H2afb3S4R1G7 Mir1904-201ENSMUST00000122702 80 ntBASIC1.09□□□□□ -2.23
H2afb3S4R1G7 Gm22770-201ENSMUST00000158368 67 ntBASIC1.09□□□□□ -2.23
H2afb3S4R1G7 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
H2afb3S4R1G7 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
H2afb3S4R1G7 Gm44488-201ENSMUST00000199467 119 ntBASIC1.09□□□□□ -2.23
H2afb3S4R1G7 Gm44602-201ENSMUST00000205948 132 ntBASIC1.09□□□□□ -2.23
H2afb3S4R1G7 Gm22980-201ENSMUST00000082608 70 ntBASIC1.09□□□□□ -2.23
H2afb3S4R1G7 Gm24099-201ENSMUST00000083384 107 ntBASIC1.09□□□□□ -2.23
H2afb3S4R1G7 Mir709-201ENSMUST00000102190 88 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 271.2 ms