Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC0,61□□□□□ -2,31
H2afb1S4R1E0 Gm22681-201ENSMUST00000083853 106 ntBASIC0,61□□□□□ -2,31
H2afb1S4R1E0 Mir362-201ENSMUST00000093592 65 ntBASIC0,61□□□□□ -2,31
H2afb1S4R1E0 Gm23578-201ENSMUST00000103943 104 ntBASIC0,6□□□□□ -2,31
H2afb1S4R1E0 Gm23857-201ENSMUST00000158379 111 ntBASIC0,6□□□□□ -2,31
H2afb1S4R1E0 Gm8034-201ENSMUST00000178853 132 ntBASIC0,6□□□□□ -2,31
H2afb1S4R1E0 Gm22286-201ENSMUST00000179708 107 ntBASIC0,6□□□□□ -2,31
H2afb1S4R1E0 Mir6364-201ENSMUST00000183396 86 ntBASIC0,6□□□□□ -2,31
H2afb1S4R1E0 Mir6240-201ENSMUST00000184281 117 ntBASIC0,6□□□□□ -2,31
H2afb1S4R1E0 AC136457.1-201ENSMUST00000224195 156 ntBASIC0,6□□□□□ -2,31
H2afb1S4R1E0 AC159093.2-201ENSMUST00000227881 297 ntBASIC0,6□□□□□ -2,31
H2afb1S4R1E0 Snord60-201ENSMUST00000082834 78 ntBASIC0,6□□□□□ -2,31
H2afb1S4R1E0 Mir20b-201ENSMUST00000102087 80 ntBASIC0,59□□□□□ -2,31
H2afb1S4R1E0 Gm25091-201ENSMUST00000103997 71 ntBASIC0,59□□□□□ -2,31
H2afb1S4R1E0 Gm25506-201ENSMUST00000104339 70 ntBASIC0,59□□□□□ -2,31
H2afb1S4R1E0 Gm23203-201ENSMUST00000104374 107 ntBASIC0,59□□□□□ -2,31
H2afb1S4R1E0 Gm24223-201ENSMUST00000158827 90 ntBASIC0,59□□□□□ -2,31
H2afb1S4R1E0 Gm22708-201ENSMUST00000158987 103 ntBASIC0,59□□□□□ -2,31
H2afb1S4R1E0 Mir3070a-201ENSMUST00000175468 89 ntBASIC0,59□□□□□ -2,31
H2afb1S4R1E0 Mir7663-201ENSMUST00000183950 61 ntBASIC0,59□□□□□ -2,31
H2afb1S4R1E0 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC0,59□□□□□ -2,31
H2afb1S4R1E0 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC0,59□□□□□ -2,31
H2afb1S4R1E0 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC0,59□□□□□ -2,31
H2afb1S4R1E0 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC0,59□□□□□ -2,31
H2afb1S4R1E0 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC0,59□□□□□ -2,31
H2afb1S4R1E0 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC0,59□□□□□ -2,31
H2afb1S4R1E0 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC0,59□□□□□ -2,31
H2afb1S4R1E0 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC0,59□□□□□ -2,31
H2afb1S4R1E0 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC0,59□□□□□ -2,31
H2afb1S4R1E0 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC0,59□□□□□ -2,31
H2afb1S4R1E0 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC0,59□□□□□ -2,31
H2afb1S4R1E0 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC0,59□□□□□ -2,32
H2afb1S4R1E0 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC0,58□□□□□ -2,32
H2afb1S4R1E0 Gm26082-201ENSMUST00000104070 127 ntBASIC0,58□□□□□ -2,32
H2afb1S4R1E0 Gm12469-201ENSMUST00000117623 207 ntBASIC0,58□□□□□ -2,32
H2afb1S4R1E0 Gm12432-201ENSMUST00000119540 186 ntBASIC0,58□□□□□ -2,32
H2afb1S4R1E0 Gm24842-201ENSMUST00000158681 54 ntBASIC0,58□□□□□ -2,32
H2afb1S4R1E0 Mir100-201ENSMUST00000175270 80 ntBASIC0,58□□□□□ -2,32
H2afb1S4R1E0 Mir3109-201ENSMUST00000175301 88 ntBASIC0,58□□□□□ -2,32
H2afb1S4R1E0 Mir669j-201ENSMUST00000179023 121 ntBASIC0,58□□□□□ -2,32
H2afb1S4R1E0 Gm27289-201ENSMUST00000183341 82 ntBASIC0,58□□□□□ -2,32
H2afb1S4R1E0 AC126939.1-201ENSMUST00000224943 226 ntBASIC0,58□□□□□ -2,32
H2afb1S4R1E0 mt-Tm-201ENSMUST00000082395 69 ntBASIC0,58□□□□□ -2,32
H2afb1S4R1E0 Gm24579-201ENSMUST00000103964 144 ntBASIC0,57□□□□□ -2,32
H2afb1S4R1E0 Gm26158-201ENSMUST00000158973 119 ntBASIC0,57□□□□□ -2,32
H2afb1S4R1E0 Gm27894-201ENSMUST00000184177 92 ntBASIC0,57□□□□□ -2,32
H2afb1S4R1E0 Mir764-201ENSMUST00000103259 108 ntBASIC0,56□□□□□ -2,32
H2afb1S4R1E0 Gm25915-201ENSMUST00000104265 126 ntBASIC0,56□□□□□ -2,32
H2afb1S4R1E0 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC0,56□□□□□ -2,32
H2afb1S4R1E0 Polr2k-ps-201ENSMUST00000120170 175 ntBASIC0,56□□□□□ -2,32
H2afb1S4R1E0 Traj61-201ENSMUST00000165025 72 ntBASIC0,56□□□□□ -2,32
H2afb1S4R1E0 Gm10548-202ENSMUST00000165672 272 ntBASIC0,56□□□□□ -2,32
H2afb1S4R1E0 Gm23917-201ENSMUST00000175256 98 ntBASIC0,56□□□□□ -2,32
H2afb1S4R1E0 Gm25693-201ENSMUST00000175443 85 ntBASIC0,56□□□□□ -2,32
H2afb1S4R1E0 Mir6342-201ENSMUST00000183870 125 ntBASIC0,56□□□□□ -2,32
H2afb1S4R1E0 AC124196.2-201ENSMUST00000224835 145 ntBASIC0,56□□□□□ -2,32
H2afb1S4R1E0 Gm37824-201ENSMUST00000193430 3236 ntBASIC0,56□□□□□ -2,32
H2afb1S4R1E0 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0,55□□□□□ -2,32
H2afb1S4R1E0 n-R5s6-201ENSMUST00000122663 88 ntBASIC0,55□□□□□ -2,32
H2afb1S4R1E0 Gm27993-201ENSMUST00000184362 85 ntBASIC0,55□□□□□ -2,32
H2afb1S4R1E0 mt-Ts2-201ENSMUST00000082416 59 ntBASIC0,55□□□□□ -2,32
H2afb1S4R1E0 Gm24624-201ENSMUST00000082617 164 ntBASIC0,55□□□□□ -2,32
H2afb1S4R1E0 Gm23301-201ENSMUST00000082713 65 ntBASIC0,55□□□□□ -2,32
H2afb1S4R1E0 Gm23678-201ENSMUST00000083157 107 ntBASIC0,55□□□□□ -2,32
H2afb1S4R1E0 Gm23989-201ENSMUST00000117030 66 ntBASIC0,54□□□□□ -2,32
H2afb1S4R1E0 Gm11248-201ENSMUST00000119568 201 ntBASIC0,54□□□□□ -2,32
H2afb1S4R1E0 Gm24913-201ENSMUST00000157286 107 ntBASIC0,54□□□□□ -2,32
H2afb1S4R1E0 Gm24290-201ENSMUST00000157634 96 ntBASIC0,54□□□□□ -2,32
H2afb1S4R1E0 Gm14884-201ENSMUST00000120456 196 ntBASIC0,53□□□□□ -2,32
H2afb1S4R1E0 n-R5s39-201ENSMUST00000122613 108 ntBASIC0,53□□□□□ -2,32
H2afb1S4R1E0 Gm25623-201ENSMUST00000157216 108 ntBASIC0,53□□□□□ -2,32
H2afb1S4R1E0 Mir7052-201ENSMUST00000184821 65 ntBASIC0,53□□□□□ -2,32
H2afb1S4R1E0 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0,53□□□□□ -2,32
H2afb1S4R1E0 Gm44469-201ENSMUST00000198558 79 ntBASIC0,53□□□□□ -2,32
H2afb1S4R1E0 Gm44602-201ENSMUST00000205948 132 ntBASIC0,53□□□□□ -2,32
H2afb1S4R1E0 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC0,53□□□□□ -2,32
H2afb1S4R1E0 AC113441.1-201ENSMUST00000223464 134 ntBASIC0,53□□□□□ -2,32
H2afb1S4R1E0 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC0,52□□□□□ -2,33
H2afb1S4R1E0 Gm25378-201ENSMUST00000104333 129 ntBASIC0,52□□□□□ -2,33
H2afb1S4R1E0 Gm25300-201ENSMUST00000175284 84 ntBASIC0,52□□□□□ -2,33
H2afb1S4R1E0 Mir21c-201ENSMUST00000184910 78 ntBASIC0,52□□□□□ -2,33
H2afb1S4R1E0 Gm38298-201ENSMUST00000193578 118 ntBASIC0,52□□□□□ -2,33
H2afb1S4R1E0 AC211878.4-201ENSMUST00000220970 262 ntBASIC0,52□□□□□ -2,33
H2afb1S4R1E0 Mir101a-201ENSMUST00000083517 83 ntBASIC0,52□□□□□ -2,33
H2afb1S4R1E0 Gm10351-201ENSMUST00000087694 125 ntBASIC0,52□□□□□ -2,33
H2afb1S4R1E0 Gm22451-201ENSMUST00000122803 151 ntBASIC0,51□□□□□ -2,33
H2afb1S4R1E0 Gm16265-201ENSMUST00000134558 108 ntBASIC0,51□□□□□ -2,33
H2afb1S4R1E0 Gm22522-201ENSMUST00000158271 151 ntBASIC0,51□□□□□ -2,33
H2afb1S4R1E0 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC0,51□□□□□ -2,33
H2afb1S4R1E0 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC0,5□□□□□ -2,33
H2afb1S4R1E0 Gm23651-201ENSMUST00000116755 120 ntBASIC0,5□□□□□ -2,33
H2afb1S4R1E0 Gm6985-201ENSMUST00000121255 271 ntBASIC0,5□□□□□ -2,33
H2afb1S4R1E0 Gm26236-201ENSMUST00000175536 137 ntBASIC0,5□□□□□ -2,33
H2afb1S4R1E0 Mir1954-201ENSMUST00000175595 86 ntBASIC0,5□□□□□ -2,33
H2afb1S4R1E0 Gm22302-201ENSMUST00000082657 106 ntBASIC0,5□□□□□ -2,33
H2afb1S4R1E0 Gm24527-201ENSMUST00000082920 107 ntBASIC0,5□□□□□ -2,33
H2afb1S4R1E0 Gm22297-201ENSMUST00000083312 106 ntBASIC0,5□□□□□ -2,33
H2afb1S4R1E0 Mir377-201ENSMUST00000083504 68 ntBASIC0,5□□□□□ -2,33
H2afb1S4R1E0 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0,49□□□□□ -2,33
H2afb1S4R1E0 Gm22196-201ENSMUST00000116865 109 ntBASIC0,49□□□□□ -2,33
Retrieved 100 of 76,532 protein–RNA pairs in 11,4 ms