Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Gm25875-201ENSMUST00000104323 107 ntBASIC-2.38□□□□□ -2.79
Scn11aQ9R053 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC-2.38□□□□□ -2.79
Scn11aQ9R053 Gm38050-201ENSMUST00000191904 238 ntBASIC-2.38□□□□□ -2.79
Scn11aQ9R053 Mir702-201ENSMUST00000102285 109 ntBASIC-2.39□□□□□ -2.79
Scn11aQ9R053 Gm28926-201ENSMUST00000191063 680 ntBASIC-2.39□□□□□ -2.79
Scn11aQ9R053 Gm5034-201ENSMUST00000199115 634 ntBASIC-2.39□□□□□ -2.79
Scn11aQ9R053 Gm24867-201ENSMUST00000104161 107 ntBASIC-2.4□□□□□ -2.79
Scn11aQ9R053 Gm23751-201ENSMUST00000157583 136 ntBASIC-2.4□□□□□ -2.79
Scn11aQ9R053 Gm22557-201ENSMUST00000157804 102 ntBASIC-2.41□□□□□ -2.79
Scn11aQ9R053 Gm38333-201ENSMUST00000193608 604 ntBASIC-2.41□□□□□ -2.79
Scn11aQ9R053 Gm22686-201ENSMUST00000082847 100 ntBASIC-2.41□□□□□ -2.79
Scn11aQ9R053 Gm25870-201ENSMUST00000179845 79 ntBASIC-2.41□□□□□ -2.8
Scn11aQ9R053 Snord61-201ENSMUST00000083176 71 ntBASIC-2.41□□□□□ -2.8
Scn11aQ9R053 Gm26420-201ENSMUST00000104273 103 ntBASIC-2.42□□□□□ -2.8
Scn11aQ9R053 Gm24461-201ENSMUST00000082735 103 ntBASIC-2.42□□□□□ -2.8
Scn11aQ9R053 AC132437.1-201ENSMUST00000218308 320 ntBASIC-2.43□□□□□ -2.8
Scn11aQ9R053 Gm26495-201ENSMUST00000083152 137 ntBASIC-2.43□□□□□ -2.8
Scn11aQ9R053 Gm24701-201ENSMUST00000101946 105 ntBASIC-2.44□□□□□ -2.8
Scn11aQ9R053 Gm24877-201ENSMUST00000158779 116 ntBASIC-2.44□□□□□ -2.8
Scn11aQ9R053 AC132833.2-201ENSMUST00000228699 157 ntBASIC-2.44□□□□□ -2.8
Scn11aQ9R053 Gm24856-201ENSMUST00000082809 107 ntBASIC-2.44□□□□□ -2.8
Scn11aQ9R053 Gm25450-201ENSMUST00000179144 107 ntBASIC-2.44□□□□□ -2.8
Scn11aQ9R053 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC-2.45□□□□□ -2.8
Scn11aQ9R053 Gm22339-201ENSMUST00000157718 62 ntBASIC-2.45□□□□□ -2.8
Scn11aQ9R053 Gm22335-201ENSMUST00000157724 99 ntBASIC-2.45□□□□□ -2.8
Scn11aQ9R053 Gm26124-201ENSMUST00000083359 108 ntBASIC-2.45□□□□□ -2.8
Scn11aQ9R053 Gm24918-201ENSMUST00000083022 130 ntBASIC-2.46□□□□□ -2.8
Scn11aQ9R053 Mir181b-2-201ENSMUST00000083644 89 ntBASIC-2.46□□□□□ -2.8
Scn11aQ9R053 Gm24983-201ENSMUST00000104457 69 ntBASIC-2.46□□□□□ -2.8
Scn11aQ9R053 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-2.46□□□□□ -2.8
Scn11aQ9R053 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-2.46□□□□□ -2.8
Scn11aQ9R053 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC-2.46□□□□□ -2.8
Scn11aQ9R053 Gm24453-201ENSMUST00000083346 76 ntBASIC-2.46□□□□□ -2.8
Scn11aQ9R053 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC-2.46□□□□□ -2.8
Scn11aQ9R053 Gm23034-201ENSMUST00000158001 147 ntBASIC-2.47□□□□□ -2.8
Scn11aQ9R053 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC-2.47□□□□□ -2.8
Scn11aQ9R053 AC134601.1-201ENSMUST00000221058 109 ntBASIC-2.47□□□□□ -2.8
Scn11aQ9R053 Gm26271-201ENSMUST00000158349 104 ntBASIC-2.48□□□□□ -2.81
Scn11aQ9R053 Gm26173-201ENSMUST00000158416 136 ntBASIC-2.48□□□□□ -2.81
Scn11aQ9R053 AC192333.1-201ENSMUST00000224573 376 ntBASIC-2.48□□□□□ -2.81
Scn11aQ9R053 Gm25142-201ENSMUST00000082698 107 ntBASIC-2.48□□□□□ -2.81
Scn11aQ9R053 Snord38a-201ENSMUST00000083746 71 ntBASIC-2.48□□□□□ -2.81
Scn11aQ9R053 Gm26143-201ENSMUST00000104480 108 ntBASIC-2.49□□□□□ -2.81
Scn11aQ9R053 Gm24003-201ENSMUST00000158455 100 ntBASIC-2.49□□□□□ -2.81
Scn11aQ9R053 Gm25410-201ENSMUST00000083758 137 ntBASIC-2.49□□□□□ -2.81
Scn11aQ9R053 Gm14567-201ENSMUST00000117155 174 ntBASIC-2.49□□□□□ -2.81
Scn11aQ9R053 Gm37832-201ENSMUST00000118935 189 ntBASIC-2.49□□□□□ -2.81
Scn11aQ9R053 n-R5s155-201ENSMUST00000122531 113 ntBASIC-2.49□□□□□ -2.81
Scn11aQ9R053 Gm22791-201ENSMUST00000157232 145 ntBASIC-2.49□□□□□ -2.81
Scn11aQ9R053 Gm22079-201ENSMUST00000157592 106 ntBASIC-2.49□□□□□ -2.81
Scn11aQ9R053 Gm44726-201ENSMUST00000203427 217 ntBASIC-2.49□□□□□ -2.81
Scn11aQ9R053 Snora19-201ENSMUST00000082962 132 ntBASIC-2.49□□□□□ -2.81
Scn11aQ9R053 Gm23658-201ENSMUST00000083233 132 ntBASIC-2.49□□□□□ -2.81
Scn11aQ9R053 Mir23a-201ENSMUST00000083677 75 ntBASIC-2.49□□□□□ -2.81
Scn11aQ9R053 Gm22834-201ENSMUST00000102021 79 ntBASIC-2.5□□□□□ -2.81
Scn11aQ9R053 Snord100-201ENSMUST00000116836 74 ntBASIC-2.5□□□□□ -2.81
Scn11aQ9R053 Gm25626-201ENSMUST00000177631 107 ntBASIC-2.5□□□□□ -2.81
Scn11aQ9R053 Gm26164-201ENSMUST00000083793 104 ntBASIC-2.5□□□□□ -2.81
Scn11aQ9R053 Mir465-201ENSMUST00000093563 74 ntBASIC-2.5□□□□□ -2.81
Scn11aQ9R053 Gm22606-201ENSMUST00000158290 103 ntBASIC-2.51□□□□□ -2.81
Scn11aQ9R053 Gm24921-201ENSMUST00000083024 107 ntBASIC-2.51□□□□□ -2.81
Scn11aQ9R053 Gm22850-201ENSMUST00000157714 82 ntBASIC-2.51□□□□□ -2.81
Scn11aQ9R053 Gm42594-201ENSMUST00000199511 246 ntBASIC-2.51□□□□□ -2.81
Scn11aQ9R053 Mup-ps5-201ENSMUST00000118667 99 ntBASIC-2.52□□□□□ -2.81
Scn11aQ9R053 Gm26369-201ENSMUST00000157825 100 ntBASIC-2.52□□□□□ -2.81
Scn11aQ9R053 Gm17919-201ENSMUST00000173344 312 ntBASIC-2.52□□□□□ -2.81
Scn11aQ9R053 Gm44563-201ENSMUST00000207958 178 ntBASIC-2.52□□□□□ -2.81
Scn11aQ9R053 AC147101.1-201ENSMUST00000217964 312 ntBASIC-2.52□□□□□ -2.81
Scn11aQ9R053 Gm23625-201ENSMUST00000082457 100 ntBASIC-2.52□□□□□ -2.81
Scn11aQ9R053 Gm22784-201ENSMUST00000104088 132 ntBASIC-2.53□□□□□ -2.81
Scn11aQ9R053 Gm27446-201ENSMUST00000183963 89 ntBASIC-2.53□□□□□ -2.81
Scn11aQ9R053 Gm7240-201ENSMUST00000220769 664 ntBASIC-2.53□□□□□ -2.81
Scn11aQ9R053 Gm25364-201ENSMUST00000158851 107 ntBASIC-2.54□□□□□ -2.82
Scn11aQ9R053 AC165157.3-201ENSMUST00000220815 103 ntBASIC-2.54□□□□□ -2.82
Scn11aQ9R053 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-2.54□□□□□ -2.82
Scn11aQ9R053 Mir489-201ENSMUST00000093599 107 ntBASIC-2.54□□□□□ -2.82
Scn11aQ9R053 Gm23941-201ENSMUST00000101953 107 ntBASIC-2.54□□□□□ -2.82
Scn11aQ9R053 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-2.54□□□□□ -2.82
Scn11aQ9R053 Gm16356-201ENSMUST00000143300 169 ntBASIC-2.54□□□□□ -2.82
Scn11aQ9R053 Mir6928-201ENSMUST00000185166 70 ntBASIC-2.54□□□□□ -2.82
Scn11aQ9R053 Mir376a-201ENSMUST00000197584 68 ntBASIC-2.54□□□□□ -2.82
Scn11aQ9R053 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC-2.54□□□□□ -2.82
Scn11aQ9R053 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC-2.54□□□□□ -2.82
Scn11aQ9R053 Gm26329-201ENSMUST00000093723 110 ntBASIC-2.54□□□□□ -2.82
Scn11aQ9R053 Gm25417-201ENSMUST00000104212 131 ntBASIC-2.55□□□□□ -2.82
Scn11aQ9R053 Gm22203-201ENSMUST00000158605 58 ntBASIC-2.55□□□□□ -2.82
Scn11aQ9R053 Snord116l12-201ENSMUST00000179816 94 ntBASIC-2.55□□□□□ -2.82
Scn11aQ9R053 Gm35558-203ENSMUST00000222264 204 ntBASIC-2.55□□□□□ -2.82
Scn11aQ9R053 Gm24051-201ENSMUST00000158622 75 ntBASIC-2.56□□□□□ -2.82
Scn11aQ9R053 AL603630.1-201ENSMUST00000214781 147 ntBASIC-2.56□□□□□ -2.82
Scn11aQ9R053 Gm25223-201ENSMUST00000158200 110 ntBASIC-2.56□□□□□ -2.82
Scn11aQ9R053 Gm12924-201ENSMUST00000121747 318 ntBASIC-2.57□□□□□ -2.82
Scn11aQ9R053 Gm24754-201ENSMUST00000177997 107 ntBASIC-2.57□□□□□ -2.82
Scn11aQ9R053 Gm22631-201ENSMUST00000179656 94 ntBASIC-2.57□□□□□ -2.82
Scn11aQ9R053 Gm28506-201ENSMUST00000189937 150 ntBASIC-2.57□□□□□ -2.82
Scn11aQ9R053 Gm23494-201ENSMUST00000116830 126 ntBASIC-2.58□□□□□ -2.82
Scn11aQ9R053 Gm25493-201ENSMUST00000157375 103 ntBASIC-2.58□□□□□ -2.82
Scn11aQ9R053 Gm25184-201ENSMUST00000157753 163 ntBASIC-2.58□□□□□ -2.82
Scn11aQ9R053 AC116589.4-201ENSMUST00000222390 216 ntBASIC-2.58□□□□□ -2.82
Scn11aQ9R053 Gm22575-201ENSMUST00000082981 110 ntBASIC-2.58□□□□□ -2.82
Retrieved 100 of 76,532 protein–RNA pairs in 194.2 ms